FFCP PHASE1:Hg19::chr11:66083418..66083442,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57124 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=18219 | |||
|TSSclassifier=not | |||
|UniProt=Q9HCU0 | |||
|association_with_transcript=194bp_to_AK027290_5end | |||
|coexpression_cluster_id=C563 | |||
|description=CAGE_peak_3_at_CD248_5end | |||
|id=chr11:66083418..66083442,- | |||
|ontology_enrichment_celltype=CL:0000055!2.59e-36!180;CL:0000057!1.00e-31!75;CL:0000183!5.36e-16!59;CL:0000187!5.53e-15!54;CL:0000680!6.15e-15!57;CL:0000056!6.15e-15!57;CL:0000355!6.15e-15!57;CL:0000393!2.47e-12!60;CL:0000211!2.47e-12!60;CL:0000048!2.76e-12!430;CL:0002620!7.98e-12!23;CL:0000723!1.21e-11!436;CL:0000192!2.42e-11!42;CL:0000514!2.42e-11!42;CL:0000034!5.99e-11!444;CL:0002334!9.83e-10!12;CL:0000136!8.75e-08!15;CL:0000359!6.30e-07!32;CL:0002570!9.80e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002620;4.79e-14;23!CL:0002334;1.00e-12;12!CL:0000057;2.35e-12;73!CL:0002320;3.04e-10;188!CL:0000723;4.49e-09;61!CL:0000134;5.74e-09;55!CL:0002570;1.39e-08;8!CL:0000187;2.02e-08;55!CL:0000192;3.12e-08;43!CL:0000048;3.59e-08;58!CL:0000393;1.06e-07;61!CL:0000211;1.06e-07;61!CL:0002559;4.13e-07;5!CL:0000034;4.99e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.44e-34,76;CL:0000048,1.55e-22,427;CL:0000723,1.43e-21,433;CL:0000034,2.46e-20,441;CL:0002320,1.66e-14,361;CL:0000187,2.16e-14,55;CL:0002620,6.59e-14,23;CL:0000680,6.87e-14,58;CL:0000056,6.87e-14,58;CL:0000355,6.87e-14,58;CL:0002334,9.14e-13,12;CL:0000393,7.34e-12,61;CL:0000211,7.34e-12,61;CL:0000134,8.12e-12,354;CL:0000192,7.87e-11,43;CL:0000514,7.87e-11,43;CL:0000219,4.40e-09,386;CL:0002570,1.15e-08,8;CL:0000136,3.31e-08,15;CL:0002559,4.33e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000514;3.12e-08;43!CL:0000355;9.72e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.33e-19!83;UBERON:0002329!1.33e-19!83;UBERON:0003077!1.33e-19!83;UBERON:0003059!1.33e-19!83;UBERON:0007282!1.33e-19!83;UBERON:0009618!1.33e-19!83;UBERON:0007285!1.33e-19!83;UBERON:0004290!2.74e-17!70;UBERON:0002385!1.13e-14!63;UBERON:0001015!1.13e-14!63;UBERON:0000383!1.13e-14!63;UBERON:0001134!2.79e-14!61;UBERON:0002036!2.79e-14!61;UBERON:0003082!2.79e-14!61;UBERON:0000486!2.88e-14!82;UBERON:0002199!8.86e-12!45;UBERON:0002416!8.86e-12!45;UBERON:0003102!2.68e-11!95;UBERON:0005256!2.73e-10!143;UBERON:0001013!3.22e-10!14;UBERON:0000475!3.77e-10!365;UBERON:0002097!5.35e-09!40;UBERON:0004923!1.23e-08!57;UBERON:0004872!3.51e-07!84;UBERON:0000479!7.88e-07!787;UBERON:0002100!9.36e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;2.70e-13;14!UBERON:0002384;4.99e-11;198!UBERON:0002199;9.72e-11;46!UBERON:0002416;9.72e-11;46!UBERON:0002097;1.11e-09;41!UBERON:0003102;1.46e-09;50!UBERON:0004457;9.21e-08;9!UBERON:0000042;9.21e-08;9!UBERON:0002073;4.13e-07;5!UBERON:0003688;7.72e-07;6!UBERON:0002358;7.72e-07;6!UBERON:0003684;7.72e-07;6!UBERON:0001178;7.72e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,2.52e-16,46;UBERON:0002416,2.52e-16,46;UBERON:0007524,7.55e-16,73;UBERON:0002329,1.27e-15,71;UBERON:0003059,1.27e-15,71;UBERON:0007282,1.27e-15,71;UBERON:0004290,1.27e-15,71;UBERON:0009618,1.27e-15,71;UBERON:0003077,3.29e-15,72;UBERON:0007285,3.29e-15,72;UBERON:0002384,1.25e-14,371;UBERON:0007503,1.08e-13,78;UBERON:0001013,1.98e-13,14;UBERON:0000486,2.34e-13,83;UBERON:0003102,2.98e-13,99;UBERON:0001134,4.49e-13,62;UBERON:0002036,4.49e-13,62;UBERON:0003082,4.49e-13,62;UBERON:0002385,4.75e-13,64;UBERON:0001015,4.75e-13,64;UBERON:0000383,4.75e-13,64;UBERON:0002097,1.81e-12,41;UBERON:0004923,1.79e-09,66;UBERON:0005256,6.78e-09,122;UBERON:0003104,1.34e-07,160;UBERON:0009142,1.34e-07,160;UBERON:0002073,4.33e-07,5;UBERON:0005086,4.33e-07,5;UBERON:0003688,9.24e-07,6;UBERON:0002358,9.24e-07,6;UBERON:0003684,9.24e-07,6;UBERON:0001178,9.24e-07,6 | |||
|phase1_expression=5.4503513781167,20.9818513413163,9.44394507443007,4.00293193412522,4.02264984984559,2.61701557230111,2.53299878168311,12.0026775951098,17.760622717589,0,0,6.11635841964482,5.53910654279752,3.09415882400117,3.31397375727916,0.672325146451775,3.61616716814386,1.46062018077475,2.92759679274304,0.738726348460727,1.02000345622126,0.313454721478088,0.286235987131057,0.273748850145768,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579297615531196,2.43806866313962,0.670700859703636,1.15076305659177,3.2529523714611,2.00535164254356,2.17269778441236,0,0,0.0945348171640679,0.443458794925128,0.263504357079378,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.95760732373446,1.8994576749687,1.85372853138506,25.5284592466444,8.15737279056221,2.80338800071154,2.1349799145941,0.74000264525148,0.933633106199299,0.67355336034844,0.817309515567294,8.47601594811616,2.88087962239999,1.87457145467037,4.05808099879417,0,4.03511437489863,1.29177948508141,0.647491777472526,0.702254033511242,5.71631679513701,3.31652656741774,13.9489804587283,4.75201142912821,3.95627086845691,10.0117749813183,4.31170885089743,0.841680569770331,2.62748891731125,3.3247693858102,3.95079858792754,5.51678032438235,2.70428506031874,0.680593098960126,17.5801842975085,5.76604949810132,7.84148034290379,15.9048280924733,8.65641245602887,11.3361837620077,11.353128236227,10.801685263441,7.50264939741229,10.6022185182528,4.23429533754577,11.3152239773168,31.2408441414621,9.77295352808111,5.25637836162512,0,0,0,0.121973706129595,0,0,0.310983165046111,0,0,26.5964204960687,23.7999147131368,8.28809528114883,10.2160944167035,19.4907460050788,0,0,0,0,0,0,0,0,0,0,1.40241773803446,3.2925920906512,1.47008711385542,0,0,0,0,0,2.23038153388083,0,0,0,0,1.95484983186195,3.11980435583874,0,0.115930404975077,1.05667824812239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.317489471460845,0,0,1.71072446022705,0.616964956219941,0,0,6.05507855464948,3.92364061949952,3.0802080044799,1.03417372606222,60.80159579482,1.690605505112,6.64845291462176,4.16029747645464,1.80045161983499,2.83698264046557,3.72991050622539,6.43400971461664,19.5343777940919,0.823240336780769,2.93162565864362,1.77695974371273,0.791951872933429,0,0,0.799783929456456,0,0,0,0,1.14861935834114,0,1.73737568001095,0.821905290201534,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,4.17151071845076,6.00204625271613,2.71265023699736,4.99130067673937,12.3116002270042,5.51958452618771,4.09994952474496,3.91229929646035,11.3703752027992,6.2083842775503,7.97070718242524,1.29058417979192,6.51627108510621,15.4682914395565,7.89229874764969,0,0,0,6.66880657181771,11.6504807657348,19.3529787730995,5.95458738765064,3.22270143904931,7.29716245525991,10.7636885374789,6.65219423786715,7.07757253031873,8.90508398669946,11.2573076475939,8.34540108971697,6.98080826117378,18.6931594506104,10.1103029260165,0,0,0,0.459257792658427,2.73136752010076,3.14698595902618,0,0,0,0,0,0,0.170093705276516,0,0,0,1.50506932156456,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,4.82051789532479,2.90012154876366,3.08097234229289,3.68408819342711,0.275673144969061,4.29680979473094,6.67076792005451,3.15338521439573,6.6774026735053,0,0,0,0,0,22.9813013186367,1.3940745403212,0,0.532306030317022,2.60979897622522,1.29726953372744,0,0.372158369359667,1.2655176988749,2.09693213316207,5.62975140884935,6.41908482050881,5.09125196681499,0,1.61885211824983,6.03981465419321,1.64937363283961,0.202182481573316,4.75530963519025,0.842516912477962,1.95053495635836,0.974853958525138,2.11300293513511,4.91399681068749,7.7772987574542,12.4308928282267,2.75682671773062,0,0.438450885253763,7.52408194546694,5.9030527684197,0.202910376962704,2.478587984798,1.69017361519345,1.43411352204052,1.57198465620994,1.07001315444375,3.19284957663538,11.3998123060739,18.4405140057545,4.17420491142287,6.29882496440969,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51619630252546,0,0,0,0.71623345421307,0,2.15012491469462,0,0.140669416410513,0,0,0,0.597743964753209,0.276283915531148,0,0,0,4.3545542272653,0,0,0,0.690503839458535,0,0,0,0,0,0,0,2.89999830173917,0,0,0,0.344743373241465,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0,1.76985594558733,0,0,0,0,0.957003479195758,2.38153742844842,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.353830258013357,0,0,0,0,0.067401132980677,0,0,0,0,0,0.789168805698781,1.20990716048664,0.30607276163049,1.5796644907122,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0.678923115418936,0,0.90392296312213,0,0,0.0633107959558787,0,0,1.92107695265417,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0.687481272035051,0,0.399358000997982,0,0.223171457441873,0.671834724867263,0.360299883542404,0,0.0787831823072236,0,0.13480708770837,0,0,0,0.272406812223151,0,0,0,0,0,0,0,0.315222829196793,1.25891011523995,0,0,0,0.714695326373367,0,0,3.25799761052228,2.5926644736038,5.87857248196936,0,0,0,1.13312091520126,0,0,0.129282956361551,0.13223260174269,0,0,0.213574825135389,0.314408610199332,0,0.496166021811951,0,0,0,0.544017803369474,1.5041393641362,0.919036730290385,0,0,0,0.366078794705889,0,0.573409195690071,0,0.124192805882767,0,0,0,0,0,0.468334905806882,0,13.1344226540449,13.7890852809862,10.5413113685497,3.21985108967651,8.30174075783498,14.2369795455446,2.51724075236616,11.9472429772959,4.19680441573507,0.295710299979268,0.63718706865481,0,1.08684069813382,5.80588690977198,2.39257543102195,3.1304703708704,1.35231848097497,2.28483127301277,0.406870733204662,3.09142720644351,0.537052785212442,0.928067519756987,2.3885753321917,0,9.27168403993541,6.06149079778654,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20927140302209,0,0,0.127894371303652,0.107824811396682,0.157265941855896,0.54604819096007,0.169732529954025,2.76347396132188,1.36329340684902,0.558644917973244,2.54403480522735,0,0,5.99549104274163,4.8999276376512,0.128458450192919,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0.977734268540344,0,0.781514011233092,0,0,0,0,0,0,0.0634158101939068,0,0,1.98484471355718,0.175871244359621,0,0,0,0,0,3.10458295569236,0,0,0.135939465953663,0.0657727735628491,0,0,0.235479278551542,0,0,0,0,0,0.643288897589907,0,0,0.695433089210318,0.801711364730253,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0.307988420568741,2.3196288626764,4.37139893753226,0,0,0,0,0,0,0.308696632431779,0.874238242015829,0,1.47088993052343,0,0,0,0.8453114551668,1.69927114687817,0,0.515663103788617,0,0,0,0,0.730336388246517,0,0.143339583151451,0.631086248772738,0.0679914901909147,0.436350690340377,0,18.2277558901708,8.78133694399695,17.7376890470754,0,0,0.126698501011437,0,0,0,0,0.833565680400634,0,0,0,0.852935927603924,0.476128862927481,0.258355639344024,0.31037357147929,0.112131862580613,0.190941474834495,0.202117188958219,1.08858373948481,0.684466602170562,0.404112318087525,0.215166616178029,0.99798106963804,0,0,1.9307228228694,0,0,0.611207220914332,2.44137706989443,0,0.603821380773079,0 | |||
|short_description=p3@CD248 | |||
}} |
Revision as of 08:50, 11 January 2014
Short description: | p3@CD248 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CD248_5end |
Coexpression cluster: | C563_Mesenchymal_Fibroblast_Adipocyte_tenocyte_Placental_Hair_Synoviocyte |
Association with transcript: | 194bp_to_AK027290_5end |
EntrezGene: | CD248 |
HGNC: | 18219 |
UniProt: | Q9HCU0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.44e-34 | 76 |
multi fate stem cell | 1.55e-22 | 427 |
somatic stem cell | 1.43e-21 | 433 |
stem cell | 2.46e-20 | 441 |
connective tissue cell | 1.66e-14 | 361 |
muscle cell | 2.16e-14 | 55 |
skin fibroblast | 6.59e-14 | 23 |
muscle precursor cell | 6.87e-14 | 58 |
myoblast | 6.87e-14 | 58 |
multi-potent skeletal muscle stem cell | 6.87e-14 | 58 |
preadipocyte | 9.14e-13 | 12 |
electrically responsive cell | 7.34e-12 | 61 |
electrically active cell | 7.34e-12 | 61 |
mesenchymal cell | 8.12e-12 | 354 |
smooth muscle cell | 7.87e-11 | 43 |
smooth muscle myoblast | 7.87e-11 | 43 |
motile cell | 4.40e-09 | 386 |
mesenchymal stem cell of adipose | 1.15e-08 | 8 |
fat cell | 3.31e-08 | 15 |
hair follicle cell | 4.33e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
integument | 2.52e-16 | 46 |
integumental system | 2.52e-16 | 46 |
dense mesenchyme tissue | 7.55e-16 | 73 |
somite | 1.27e-15 | 71 |
presomitic mesoderm | 1.27e-15 | 71 |
presumptive segmental plate | 1.27e-15 | 71 |
dermomyotome | 1.27e-15 | 71 |
trunk paraxial mesoderm | 1.27e-15 | 71 |
paraxial mesoderm | 3.29e-15 | 72 |
presumptive paraxial mesoderm | 3.29e-15 | 72 |
connective tissue | 1.25e-14 | 371 |
epithelial vesicle | 1.08e-13 | 78 |
adipose tissue | 1.98e-13 | 14 |
multilaminar epithelium | 2.34e-13 | 83 |
surface structure | 2.98e-13 | 99 |
skeletal muscle tissue | 4.49e-13 | 62 |
striated muscle tissue | 4.49e-13 | 62 |
myotome | 4.49e-13 | 62 |
muscle tissue | 4.75e-13 | 64 |
musculature | 4.75e-13 | 64 |
musculature of body | 4.75e-13 | 64 |
skin of body | 1.81e-12 | 41 |
organ component layer | 1.79e-09 | 66 |
trunk mesenchyme | 6.78e-09 | 122 |
mesenchyme | 1.34e-07 | 160 |
entire embryonic mesenchyme | 1.34e-07 | 160 |
hair follicle | 4.33e-07 | 5 |
hair follicle placode | 4.33e-07 | 5 |
omentum | 9.24e-07 | 6 |
peritoneum | 9.24e-07 | 6 |
abdominal cavity | 9.24e-07 | 6 |
visceral peritoneum | 9.24e-07 | 6 |