FFCP PHASE1:Hg19::chr11:68808268..68808276,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:68808268..68808276,- | |||
|id=chr11:68808268..68808276,- | |||
|ontology_enrichment_celltype=CL:0000128!1.21e-30!7;CL:0000126!1.21e-30!7;CL:0000127!1.21e-30!7;CL:0002453!1.21e-30!7;CL:0000133!6.19e-24!59;CL:0000333!2.82e-20!41;CL:0000148!4.09e-20!10;CL:0000541!4.09e-20!10;CL:0000221!2.12e-19!71;CL:0002603!1.16e-18!3;CL:0000710!3.78e-17!20;CL:0000243!2.51e-16!15;CL:0000125!2.51e-16!15;CL:0000030!2.51e-16!15;CL:0000339!2.51e-16!15;CL:0002319!2.56e-16!25;CL:0000075!9.80e-16!27;CL:0000095!1.63e-14!17;CL:0000123!1.63e-14!17;CL:0000147!3.20e-14!14;CL:0002077!6.25e-10!33;CL:0000055!1.36e-09!180;CL:0002605!4.49e-09!3;CL:0002567!4.86e-09!3;CL:0002564!1.06e-08!3;CL:0000064!1.29e-08!3;CL:0005012!1.29e-08!3;CL:0000067!1.29e-08!3;CL:0002304!1.29e-08!3;CL:0002574!8.67e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000128;3.18e-75;7!CL:0000126;3.18e-75;7!CL:0000127;3.18e-75;7!CL:0002603;7.81e-45;3!CL:0000243;1.68e-31;15!CL:0000125;1.68e-31;15!CL:0000095;2.86e-28;17!CL:0002319;4.09e-20;25!CL:0002605;2.59e-12;3!CL:0002567;2.59e-12;3!CL:0002564;2.59e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,1.79e-75,7;CL:0000126,1.79e-75,7;CL:0000127,1.79e-75,7;CL:0002453,1.79e-75,7;CL:0002603,5.00e-45,3;CL:0000243,1.33e-31,15;CL:0000125,1.33e-31,15;CL:0000030,1.33e-31,15;CL:0000339,1.33e-31,15;CL:0000095,2.32e-28,17;CL:0000123,2.32e-28,17;CL:0002319,3.53e-20,25;CL:0000333,1.17e-19,41;CL:0000133,5.12e-14,59;CL:0002605,2.59e-12,3;CL:0002567,2.89e-12,3;CL:0002564,3.24e-12,3;CL:0000221,1.22e-11,72 | |||
|ontology_enrichment_development_v019=CL:0000339;1.68e-31;15!CL:0000133;2.20e-09;59 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002037!1.41e-09!6;UBERON:0006215!1.41e-09!6;UBERON:0002242!1.06e-08!3;UBERON:0003068!1.06e-08!3;UBERON:0002328!1.06e-08!3;UBERON:0004880!1.06e-08!3;UBERON:0001778!1.29e-08!3;UBERON:0001775!1.29e-08!3;UBERON:0002336!9.73e-07!1;UBERON:0001018!9.73e-07!1;UBERON:0002473!9.73e-07!1;UBERON:0005340!9.73e-07!1;UBERON:0002316!9.73e-07!1;UBERON:0003544!9.73e-07!1;UBERON:0001020!9.73e-07!1;UBERON:0005970!9.73e-07!1;UBERON:0002437!9.73e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;4.85e-23;6!UBERON:0002680;9.73e-16;9!UBERON:0001895;9.73e-16;9!UBERON:0002242;2.59e-12;3!UBERON:0004733;4.54e-12;12!UBERON:0002028;4.54e-12;12!UBERON:0004732;3.21e-11;13!UBERON:0011135;6.55e-08;5!UBERON:0002216;6.55e-08;5!UBERON:0011134;6.55e-08;5!UBERON:0002209;6.55e-08;5!UBERON:0002213;6.55e-08;5!UBERON:0007844;6.55e-08;5!UBERON:0011138;6.55e-08;5!UBERON:0001130;6.55e-08;5!UBERON:0001066;6.55e-08;5!UBERON:0001468;6.55e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,3.88e-23,6;UBERON:0006215,3.88e-23,6;UBERON:0002680,8.39e-16,9;UBERON:0001895,8.39e-16,9;UBERON:0010092,8.39e-16,9;UBERON:0002242,3.24e-12,3;UBERON:0003068,3.24e-12,3;UBERON:0002328,3.24e-12,3;UBERON:0004880,3.24e-12,3;UBERON:0004733,4.07e-12,12;UBERON:0002028,4.07e-12,12;UBERON:0007277,4.07e-12,12;UBERON:0004732,2.90e-11,13;UBERON:0003076,6.78e-10,15;UBERON:0003057,6.78e-10,15;UBERON:0000955,3.85e-08,68;UBERON:0006238,3.85e-08,68;UBERON:0011135,7.49e-08,5;UBERON:0002216,7.49e-08,5;UBERON:0011134,7.49e-08,5;UBERON:0002209,7.49e-08,5;UBERON:0002213,7.49e-08,5;UBERON:0005856,7.49e-08,5;UBERON:0005866,7.49e-08,5;UBERON:0005863,7.49e-08,5;UBERON:0007844,7.49e-08,5;UBERON:0011138,7.49e-08,5;UBERON:0001130,7.49e-08,5;UBERON:0001066,7.49e-08,5;UBERON:0001468,7.49e-08,5;UBERON:0001017,6.13e-07,81 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09305798730539,0.204000691244253,1.88072832886853,1.43117993565528,0.821246550437305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378139268656271,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0.438977620880838,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579652024875384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0.763976851116555,1.17217447210047,0,0.205654985406647,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502548796003046,0.637938751653163,0,0,0,0.12269149171914,1.00034104211935,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63629892003448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.754703705257725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994581110581374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0.126166424835079,0,0,0.713921808193872,0,0.18378979906969,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:68808268..68808276,- | |||
}} |
Revision as of 09:05, 11 January 2014
Short description: | p@chr11:68808268..68808276, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:68808268..68808276, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 1.79e-75 | 7 |
macroglial cell | 1.79e-75 | 7 |
astrocyte | 1.79e-75 | 7 |
oligodendrocyte precursor cell | 1.79e-75 | 7 |
astrocyte of the cerebellum | 5.00e-45 | 3 |
glial cell (sensu Vertebrata) | 1.33e-31 | 15 |
glial cell | 1.33e-31 | 15 |
glioblast | 1.33e-31 | 15 |
glioblast (sensu Vertebrata) | 1.33e-31 | 15 |
neuron associated cell | 2.32e-28 | 17 |
neuron associated cell (sensu Vertebrata) | 2.32e-28 | 17 |
neural cell | 3.53e-20 | 25 |
migratory neural crest cell | 1.17e-19 | 41 |
neurectodermal cell | 5.12e-14 | 59 |
astrocyte of the cerebral cortex | 2.59e-12 | 3 |
light melanocyte | 2.89e-12 | 3 |
nucleus pulposus cell of intervertebral disc | 3.24e-12 | 3 |
ectodermal cell | 1.22e-11 | 72 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 3.88e-23 | 6 |
rhombic lip | 3.88e-23 | 6 |
regional part of metencephalon | 8.39e-16 | 9 |
metencephalon | 8.39e-16 | 9 |
future metencephalon | 8.39e-16 | 9 |
nucleus pulposus | 3.24e-12 | 3 |
axial mesoderm | 3.24e-12 | 3 |
notochord | 3.24e-12 | 3 |
chordamesoderm | 3.24e-12 | 3 |
segmental subdivision of hindbrain | 4.07e-12 | 12 |
hindbrain | 4.07e-12 | 12 |
presumptive hindbrain | 4.07e-12 | 12 |
segmental subdivision of nervous system | 2.90e-11 | 13 |
posterior neural tube | 6.78e-10 | 15 |
chordal neural plate | 6.78e-10 | 15 |
brain | 3.85e-08 | 68 |
future brain | 3.85e-08 | 68 |
intervertebral cartilage | 7.49e-08 | 5 |
symphysis | 7.49e-08 | 5 |
nonsynovial joint | 7.49e-08 | 5 |
fibrous joint | 7.49e-08 | 5 |
cartilaginous joint | 7.49e-08 | 5 |
developing mesenchymal condensation | 7.49e-08 | 5 |
pre-cartilage condensation | 7.49e-08 | 5 |
cartilaginous condensation | 7.49e-08 | 5 |
cartilage element | 7.49e-08 | 5 |
post-cranial axial skeletal system | 7.49e-08 | 5 |
vertebral column | 7.49e-08 | 5 |
intervertebral disk | 7.49e-08 | 5 |
intervertebral joint | 7.49e-08 | 5 |
central nervous system | 6.13e-07 | 81 |