FFCP PHASE1:Hg19::chr12:19592602..19592648,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=121536 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24051 | |||
|TSSclassifier=strong | |||
|UniProt=Q6ZN18,B3KXA1 | |||
|association_with_transcript=0bp_to_ENST00000266508,ENST00000398864,ENST00000435841,NM_001114176,NM_153207,uc001ree.2,uc001ref.2_5end | |||
|description=CAGE_peak_1_at_AEBP2_5end | |||
|id=chr12:19592602..19592648,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.06e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.60e-32!115;UBERON:0001049!3.25e-15!57;UBERON:0005068!3.25e-15!57;UBERON:0006241!3.25e-15!57;UBERON:0007135!3.25e-15!57;UBERON:0003080!4.39e-13!42;UBERON:0002780!8.71e-13!41;UBERON:0001890!8.71e-13!41;UBERON:0006240!8.71e-13!41;UBERON:0000073!5.93e-12!94;UBERON:0001016!5.93e-12!94;UBERON:0000955!6.49e-12!69;UBERON:0006238!6.49e-12!69;UBERON:0005743!6.75e-12!86;UBERON:0002346!1.35e-11!90;UBERON:0001017!1.40e-11!82;UBERON:0002616!1.72e-11!59;UBERON:0003075!1.30e-10!86;UBERON:0007284!1.30e-10!86;UBERON:0002020!5.23e-10!34;UBERON:0003528!5.23e-10!34;UBERON:0001893!8.89e-10!34;UBERON:0002791!1.54e-09!33;UBERON:0001869!4.87e-09!32;UBERON:0000153!3.33e-08!129;UBERON:0007811!3.33e-08!129;UBERON:0003056!5.23e-08!61;UBERON:0002619!2.31e-07!22;UBERON:0000033!3.62e-07!123;UBERON:0000956!9.91e-07!25;UBERON:0000203!9.91e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.69e-09;41!UBERON:0001890;1.69e-09;41!UBERON:0007023;1.84e-09;114!UBERON:0000922;2.75e-09;49!UBERON:0000073;2.08e-08;53!UBERON:0002616;2.08e-08;53!UBERON:0003528;2.36e-08;34!UBERON:0002020;2.36e-08;34!UBERON:0002791;2.85e-08;32!UBERON:0001893;3.04e-08;34!UBERON:0001869;4.77e-08;32!UBERON:0002619;2.73e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.51e-32,114;UBERON:0001049,6.51e-15,56;UBERON:0005068,6.51e-15,56;UBERON:0006241,6.51e-15,56;UBERON:0007135,6.51e-15,56;UBERON:0000073,1.02e-13,53;UBERON:0002616,1.02e-13,53;UBERON:0002780,8.71e-13,41;UBERON:0001890,8.71e-13,41;UBERON:0003080,8.71e-13,41;UBERON:0006240,8.71e-13,41;UBERON:0002346,3.58e-12,86;UBERON:0000955,1.23e-11,68;UBERON:0006238,1.23e-11,68;UBERON:0001016,2.32e-11,89;UBERON:0001017,2.59e-11,81;UBERON:0003075,3.64e-11,82;UBERON:0007284,3.64e-11,82;UBERON:0003528,5.23e-10,34;UBERON:0002020,5.23e-10,34;UBERON:0001893,8.89e-10,34;UBERON:0002791,3.68e-09,32;UBERON:0001869,4.87e-09,32;UBERON:0011216,3.93e-08,223;UBERON:0003056,3.95e-08,61;UBERON:0002619,2.31e-07,22;UBERON:0004121,7.42e-07,171;UBERON:0000924,7.42e-07,171;UBERON:0006601,7.42e-07,171;UBERON:0000956,9.91e-07,25;UBERON:0000203,9.91e-07,25 | |||
|phase1_expression=4.54195948176392,5.1384125733836,6.90676580070259,7.00513088471913,10.2801051718276,3.48935409640147,0,1.89515962028049,5.22371256399677,4.66894479352867,4.18680700783456,6.99012390816551,4.48403862988371,13.242999766725,11.930305526205,8.0679017574213,11.4511960324556,9.49403117503585,9.27072317701963,3.93987385845721,5.71201935483908,5.01527554364941,10.8769675109802,9.71808418017478,8.913527411231,11.0799438334529,9.6878695550936,10.311112352092,18.0947567350496,29.1710342553882,19.3520154145095,2.75826367343678,3.614471025339,1.10926203050036,11.4651456858846,10.0940155066069,12.6248188913984,42.6576464569546,37.1007227819762,34.0707067023887,13.2110129801555,11.3362783106643,16.4848363285879,12.7950450126017,10.5805264232867,9.46077838632483,11.1565937714729,14.8020439687857,7.12324653058738,8.91846416198666,8.19714260893122,6.3850202069918,11.721353145045,10.3277549373412,12.1883837934908,12.8004790888971,8.18718450173537,8.98893937780339,9.79468455586888,5.1348644332175,16.6227652707751,9.56568770541477,8.7764009353518,8.95071976118658,9.28669563611469,14.1846306172785,17.4390229718761,11.3061899365534,9.38669253156363,6.08128765174327,19.3727840842678,13.6262725315399,8.22802207346299,6.12640330304631,7.65375479874157,7.54771123830153,9.43560501630559,9.6113211418564,10.9293398954014,5.13022938734247,7.75775041076451,4.93193215164512,5.27988733383968,6.00752472388345,9.7846017924991,11.5217160092957,13.6134635592244,12.6445536789986,8.59358334620321,10.494591299889,23.3377317334874,22.9022503854666,21.4073007750128,7.93027971474155,16.8152568894461,7.90152254325231,63.5372557467681,53.4494637338864,39.2698863089063,13.5421061266449,22.1627141310841,14.203434172042,15.5861382726329,10.249762033436,15.6141130961664,15.2858387262699,11.3737622781307,13.7057712106472,11.705341280389,10.6884637992389,9.39590060471884,14.2003512010176,20.3152591532023,14.1796638887548,16.7256838087963,12.2374090113371,23.3764501097172,18.2122546105794,18.9764769014627,12.7426165729639,10.4173352617027,21.8603970223126,20.4782161945771,13.9505406158316,18.7396089828519,15.8640758869491,16.4225599384209,37.2972474965755,44.9299528916292,44.8955652036677,26.8187552945358,6.03630773733273,9.71755470010831,7.22878304769133,6.51739283826656,16.3676566425731,11.1340032587154,17.0322204605923,9.07534244775051,6.43015252641436,6.76327849837071,18.1406019564332,5.82872461268068,5.19098219898201,8.11368484136708,11.4925626617516,6.91381394698099,17.8867968229006,15.4438625910635,11.5151825412165,5.16782259153433,0.860234595106124,7.63709103536707,4.52246353539208,5.45349267072878,7.15306909044175,3.34391946458897,6.20200222006389,6.04802646567407,10.0416183829401,4.02829317109147,6.84244895146661,12.4471649349566,7.35326160691737,5.67099363517232,7.32257771929454,12.7981742396917,10.135033243499,6.13266549863533,4.74632829784064,5.31285057398181,18.4492584410489,34.9002237733493,3.92484646928281,16.4000744059455,9.11739683984974,6.3556406790345,10.0392817262085,10.2853830837524,8.97084160227691,7.47242970107935,5.18001851676036,17.7390290177867,6.87024427555409,7.68270944633256,6.81108424402191,11.5235184896,7.96692868234909,8.74048215124897,3.4228309292667,6.42629326372745,7.75067691048848,6.63679071909339,5.75848307479219,9.1869377064702,9.70391106762967,14.982238270486,9.50402285825643,13.1051472517635,6.37112953356618,7.18618141816238,5.72342787443825,9.75924455001321,6.37247465613621,13.1693286264251,7.66219489497549,13.5214253015937,5.33131260852099,7.17558542755448,11.5320989962026,8.26534414522291,4.80145753735044,8.65641245602887,8.24449728146013,8.74749224758472,8.27004027982204,5.74878330451072,8.83518209854401,10.5857383438644,13.0933306023238,7.10019185033229,6.7503905812519,6.61286310010902,4.25173876959253,6.54590689418003,6.59650569394709,27.5660575852886,16.8312805768286,20.9149097165133,20.9395331131048,18.6717429647965,9.12443397689575,1.56449532329816,12.8648187638577,2.76269842704961,10.6804623447355,7.94067429836544,6.27026040211173,6.23763353288976,6.7483088367375,8.60292987312673,8.06153943141903,6.8808479542218,6.74156540800822,6.27908688401107,4.61696588335668,9.59602091012043,8.41450642820675,6.5851841813024,5.88034845542168,15.2106041786197,6.87979051674338,10.6342183202653,14.5682822806835,8.73217913656106,7.54898365313512,7.68251997860379,3.37205259772859,6.63491217916764,11.9439094254503,6.51616610620649,7.27954349695705,5.77325368101093,12.4045533323332,13.6194085313553,8.51762041790336,4.1668696131895,9.70296176396451,7.11183958163348,3.43394464837949,8.8638122191463,0.702012795417713,6.39113997841531,7.49870671894216,6.88726725615324,6.238104278665,9.76187897461046,11.3347236020445,4.60059214998253,15.2725603747742,13.7355557060633,63.649731471017,59.2333008543711,53.6530342062115,5.27032522625003,4.20187268114105,3.51652341630141,5.13217338068116,4.01027221542962,5.40617504119051,13.7196687662678,2.69114602428866,6.10344096366592,6.52710743806455,4.91232519879556,14.3062578340753,1.690605505112,12.233153362904,6.24044621468197,2.57207374262142,5.67396528093113,2.66422179016099,17.0143812453196,8.68194568626309,10.70212437815,4.23457039581856,19.1911652320975,4.75171123760058,6.93310567237048,4.35766729300147,9.79735313584159,7.29742683847143,7.03159928004977,10.5416969741516,6.23024624278115,16.0806710167759,34.2328572097724,5.64647096003559,13.7669136108757,9.31117008847457,6.72510863961164,38.6180289995777,47.6536940439533,41.7114867909182,8.63921722356376,7.8083912314573,10.05275456611,10.8885572467327,7.65526501983796,15.7291475028908,14.9580729602012,20.7207756718018,17.0541173489604,14.5049451107306,11.6643960190886,16.6376689224646,12.133171238207,15.2971342582917,18.8597678138268,8.42649079237613,6.82222512167955,10.3473071292505,7.97070718242524,3.87175253937577,9.99161566382953,5.286631251494,6.17658162859541,37.6317807543655,31.2785591186994,38.8488310404537,2.72814814301633,4.99306318531491,6.95497674658265,6.4508030032882,5.83155498494637,4.77122160536225,8.07276640310916,6.14048698880044,10.1337970320473,2.96836132889982,8.48153315914606,4.79416658345443,7.80207982131187,9.34657972530518,5.34567740915813,10.0313343161046,7.41873940122154,4.9723734025384,5.85553685639494,8.19410256030227,14.4236856455367,4.96319574198153,6.7773496651885,3.92174884588428,4.38417673959782,8.12747542475143,4.54933536283586,3.57196781080683,11.4435435534134,6.16909010761157,3.25135725052623,4.51520796469368,4.07802036872061,3.3243040357149,3.80587083027703,1.97333888981341,2.87578996127391,12.3096060055867,7.87235149679294,13.991270970565,16.7956848985787,6.50143200210238,6.76577899348821,5.16838984196555,7.80072295243825,12.8547143875328,14.6939491804025,4.62145851343933,5.98664331431905,4.9621166094431,11.386545956037,9.42608510442485,7.75562309486518,11.3070685271356,5.61968712227326,11.5314040419064,12.7612712494584,9.50883140042169,10.2266020845403,11.0184321390724,4.1822236209636,6.77673876387395,2.66153015158511,5.21959795245044,3.7064843820784,2.57624796135584,3.72158369359667,6.32758849437452,5.3376454298671,5.37385361753801,20.5410714256282,5.09125196681499,2.35484592059769,10.2527300822489,11.2560182191782,7.18655654308687,2.62837226045311,4.75530963519025,1.68503382495592,8.77740730361263,9.50482609562009,4.22600587027022,9.41849388715102,12.0194617160656,9.04064932961942,7.71911480964574,7.96126770289464,1.75380354101505,6.36653087693356,14.4296845450259,4.46402829317949,4.64735247149625,3.09865162785466,7.31397896240663,11.0038925934696,2.85336841185,4.25713276884717,11.3998123060739,20.4162833635139,6.07157078025144,6.99869440489966,4.71488352355009,4.69211592875051,1.08890984861323,19.3936229600165,2.15252686335615,8.42357378338128,3.99087138183008,8.04031900724358,11.1638474031077,8.41100927856613,15.3804740537024,19.2967738120809,18.0999400157925,8.43015304550532,10.2605973075242,18.2418790547682,15.7031384557386,7.69983884210687,5.14584453560167,3.53026032738866,15.8696134274089,12.8055318027145,9.08729754554287,4.19116680008915,3.4470966623826,5.08016598537319,7.14168268604022,5.89674074038263,4.33645890163065,5.64047624782884,87.7220669815235,18.2835120025732,9.15352028091087,8.27378799483295,27.6800054498712,9.96165499791718,3.99412993600995,4.47352215784832,5.00547425135725,5.66625476665917,4.17609260842864,36.9262196843137,4.05683517713975,18.9851021758757,42.2961015263549,2.99424864653152,16.9949487955397,4.73306034823102,4.68062213965409,13.3543988999014,15.7571359926875,10.9876931908076,14.7437137007631,11.9297717731956,41.2161390082802,5.89936136621401,10.2178402020591,9.50064336575971,48.8157571215121,35.640625103518,7.80991518348256,16.5675265653491,9.72369963142449,3.73247505194169,9.97538697735328,3.04335996948536,11.7661645152181,47.3488347057281,11.974154617347,10.0023291130173,23.2639859062852,17.9970110433991,13.9729658600836,13.0213880542617,13.3813799994179,20.2999881121742,12.1758989665485,8.13611680936852,6.14607972596635,2.75794698593172,11.0809753085637,11.285624670664,28.3437243460429,30.6314954108536,21.3614430843917,43.1259113731776,16.8462142803522,21.7191543182433,11.329600205975,12.1298657522385,53.7112804356504,4.32979812218605,20.7507513949254,11.3992208400411,6.19290019955446,7.01802551410223,9.52614971379368,9.06159119231679,2.04386596391473,7.53505230696119,12.798299506312,4.06072189110925,4.70550082362575,2.51732380463764,4.93359705082881,8.74151184392083,11.6048935490415,7.99840759979824,9.04659657177221,10.8194319871046,13.9336670350991,23.6181697223916,21.9970852176105,15.4190986913923,13.5920332841153,11.2775705465892,23.9274022081404,37.7211494230431,19.4439489952031,8.94028467156763,20.7404496068015,8.74009366322734,24.8588173795116,26.6179575307061,14.997565319894,19.3982799459458,7.21552413189564,3.62908669890365,84.4110418338125,27.4723323376664,73.4603029072907,88.4095980319895,12.5228200253109,8.32048038078832,6.07459084172958,12.7390116638691,5.65884842772617,17.647393492445,6.36348320144981,4.64430390187609,6.28568126941196,4.27000376676688,31.1334742927826,21.2697265326516,23.5019970411754,9.18180895133231,7.15372602130763,21.6522922169105,2.93327074102205,4.40873511383435,29.029607284552,7.59276516412095,11.6713237894826,11.3391230204257,15.6151448054388,1.29649318189335,21.3714361172544,22.6266273232124,15.9007921106128,12.1339301722307,8.66984849908735,4.91216002832582,16.2113477951643,33.6787232074303,19.1619882100458,11.1739014769189,6.83507121126218,35.189582560304,45.602924378325,65.3264452364901,14.3768880359274,8.58452096273142,27.0037463504666,27.5452237195578,18.0149941771202,26.7940683913144,10.0054641530174,11.6206360317445,12.5370591568784,6.00407637239968,7.45125322178903,16.6998234859954,40.0438013968032,6.43012593860077,8.1148267592368,6.64704540846696,10.1238251198175,18.5712469093908,22.9633324167333,13.4173875039706,23.6417121897595,30.6859340589739,99.7923180108391,3.04788476865836,5.9493711169028,12.8645158747206,15.8902072887704,8.64513028026149,5.42999601753713,1.72844298240254,6.85833456229759,8.38111340937412,5.50019889020571,18.4019063528255,10.1980882368113,8.79313402068495,6.62534444561107,36.0699448248726,23.2729379067134,8.89651556998513,18.3251905802335,27.0172153796268,42.4451623769098,25.6828214315261,16.3734787197944,27.8632400976101,2.55764456599881,21.065261506416,10.8803560673895,7.7713867147037,7.96498499585,9.83617892129413,3.92635240625586,19.4934999592737,17.3277296160788,33.801551290755,21.7895494362227,27.7322628842131,21.2990662088945,23.9343138439679,10.8732954927033,8.79564881741557,6.56570267153425,5.17584803335978,6.08835377548946,4.0577888011031,5.07466329815372,6.31025936587506,4.99325275352352,6.25029917407794,7.29546915082468,8.89811221596536,3.66144109435078,6.65416064558252,6.372925223894,6.20991629956462,6.3718706865481,8.09645601894488,4.65788870628778,3.7323558705677,4.78515086204391,4.69570555630561,7.06210762286927,7.23529903120711,8.54428539729789,4.00067050245631,5.80017008029438,7.4245401580559,7.16572599657509,8.80061082258938,8.92828833475262,9.09223619667982,35.3317715040223,8.47527253792135,8.3632220636221,7.82982875895635,9.29494294600317,9.26089897295336,18.5999895424915,10.9244193059707,8.33763907334625,15.3498834705095,5.83074181621407,5.40159307158561,8.10923715134749,5.38107189034688,5.52688546769918,12.1543982470953,35.94719339945,21.8243545900115,19.398266685751,12.1038391749325,2.94848863961771,9.33937053264133,15.6370971285384,15.5990168766845,2.56060151265938,10.3328987796489,41.9961805639459,7.36423801007363,3.07734916982778,23.01685862122,18.9283669529404,5.39124056983409,9.59322245320968,12.8867373066576,9.50502167742541,30.3982135745407,43.2535817263918,25.139021308796,15.9002175326709,20.9772241703334,13.609702720853,13.0490099165553,8.26862788853641,19.5899136544202,24.0884179753494,43.1011419454308,16.2041927750196,13.8639432921945,15.6986963093775,31.487750898211,34.2646608621971,5.79071539156051,4.71878893390961,18.3428598521679,7.50916829977198,8.00902400481051,33.1372764508848,3.58049199809294,39.6358430400586,8.47161288554784,9.37816813479711,49.7622719514703,5.40447327783319,19.51700338065,18.3702230162033,10.9350933805939,31.0030194751776,16.2978632198341,16.4092442705466,13.7064441714296,33.742360130472,21.4562918118737,15.8425410273098,55.1772890954635,54.4779629994495,21.2437961482821,23.676867900535,17.0308550712267,7.37497520356987,7.20249639637158,21.002647489841,13.2861002596955,3.30942754475111,7.67496673055277,48.3517451959166,22.1532981781563,9.80952571598262,38.3526662613988,5.61411737168416,6.21077194253165,36.1671313533881,10.9029392095581,21.7371465438394,60.3288204889951,51.3095273427362,19.4783194313255,28.5099856746896,84.3336787413192,15.9184122763503,7.92824404894788,6.56143216645514,30.060480563556,23.1397937229491,4.96330217062912,3.82215575590973,18.5680016784335,4.1223098118402,20.360293472039,15.5382920925095,14.6807813804433,11.598144313382,32.0569255419032,10.2933363923326,9.94753875806841,15.6974519826391,9.14863264515576,7.69583617218004,3.62310824560016,11.190252925652,14.8620501142691,2.35158648180761,38.7334348371171,11.5481508079797,24.7348668564831,28.5164544314003,22.8234092895036,16.3130030100304,19.4546710218297,29.5861705798719,22.5867012390339,17.4982859833544,7.76368717774522,6.74027480189013,53.3145563419958,18.8079006195862,23.0776728873837,9.30852216939789,17.6777874496378,21.3811838266785,19.5739930990698,17.1117708356706,12.0165663444169,10.8156640530947,9.46248186263092,3.38723273087456,19.5115691557613,17.6440675453628,75.3553082848881,37.6769088092864,16.2959900540044,20.6118059153611,14.7380271585898,28.1917609415985,30.7195997709829,17.4851865158804,30.4722472273588,25.1250859262064,35.5688112915266,5.71872499161128,26.5408650019948,37.3916799572706,11.321270890642,28.4053639900783,27.1428773648788,24.815883065866,23.6188853147669,2.11648498388534,6.72382279029607,46.3373477488656,13.5636055180946,21.1176848163109,42.6622640198204,32.1447980869433,41.9426767736873,24.3541290245142,16.6695615997681 | |||
|short_description=p1@AEBP2 | |||
}} |
Revision as of 12:32, 11 January 2014
Short description: | p1@AEBP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AEBP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000266508, ENST00000398864, ENST00000435841, NM_001114176, NM_153207, uc001ree.2, uc001ref.2_5end |
EntrezGene: | AEBP2 |
HGNC: | 24051 |
UniProt: | Q6ZN18B3KXA1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 5.51e-32 | 114 |
neural tube | 6.51e-15 | 56 |
neural rod | 6.51e-15 | 56 |
future spinal cord | 6.51e-15 | 56 |
neural keel | 6.51e-15 | 56 |
regional part of nervous system | 1.02e-13 | 53 |
regional part of brain | 1.02e-13 | 53 |
regional part of forebrain | 8.71e-13 | 41 |
forebrain | 8.71e-13 | 41 |
anterior neural tube | 8.71e-13 | 41 |
future forebrain | 8.71e-13 | 41 |
neurectoderm | 3.58e-12 | 86 |
brain | 1.23e-11 | 68 |
future brain | 1.23e-11 | 68 |
nervous system | 2.32e-11 | 89 |
central nervous system | 2.59e-11 | 81 |
neural plate | 3.64e-11 | 82 |
presumptive neural plate | 3.64e-11 | 82 |
brain grey matter | 5.23e-10 | 34 |
gray matter | 5.23e-10 | 34 |
telencephalon | 8.89e-10 | 34 |
regional part of telencephalon | 3.68e-09 | 32 |
cerebral hemisphere | 4.87e-09 | 32 |
organ system subdivision | 3.93e-08 | 223 |
pre-chordal neural plate | 3.95e-08 | 61 |
regional part of cerebral cortex | 2.31e-07 | 22 |
ectoderm-derived structure | 7.42e-07 | 171 |
ectoderm | 7.42e-07 | 171 |
presumptive ectoderm | 7.42e-07 | 171 |
cerebral cortex | 9.91e-07 | 25 |
pallium | 9.91e-07 | 25 |