FFCP PHASE1:Hg19::chr12:56709736..56709780,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10330 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13529 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=3bp_to_ENST00000553164_5end | |||
|description=CAGE_peak_2_at_CNPY2_5end | |||
|id=chr12:56709736..56709780,- | |||
|ontology_enrichment_celltype=CL:0000012!2.22e-29!682;CL:0000548!2.24e-28!679;CL:0000004!2.24e-28!679;CL:0000255!2.24e-28!679;CL:0000144!6.37e-23!625;CL:0000055!3.71e-22!180;CL:0000003!8.57e-22!722;CL:0002321!3.59e-19!248;CL:0000220!2.66e-18!246;CL:0002371!2.44e-15!591;CL:0000222!9.70e-15!119;CL:0000183!8.31e-12!59;CL:0000192!9.84e-12!42;CL:0000514!9.84e-12!42;CL:0000680!1.29e-11!57;CL:0000056!1.29e-11!57;CL:0000355!1.29e-11!57;CL:0000393!1.01e-10!60;CL:0000211!1.01e-10!60;CL:0000187!2.62e-10!54;CL:0000359!5.74e-10!32;CL:0000066!5.75e-09!254;CL:0000063!2.92e-08!578;CL:0000034!5.68e-08!444;CL:0000147!8.61e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.74e-09;32!CL:0000192;8.99e-08;43!CL:0000147;7.99e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,5.31e-19,250;CL:0000222,1.84e-14,121;CL:0000680,5.35e-11,58;CL:0000056,5.35e-11,58;CL:0000355,5.35e-11,58;CL:0000192,5.55e-11,43;CL:0000514,5.55e-11,43;CL:0000393,3.73e-10,61;CL:0000211,3.73e-10,61;CL:0000359,5.74e-10,32;CL:0000187,1.01e-09,55;CL:0000066,3.30e-09,253;CL:0000034,6.87e-07,441;CL:0000147,8.61e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000514;8.99e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.04e-09!79;UBERON:0007798!1.04e-09!79;UBERON:0004290!8.39e-09!70;UBERON:0001134!1.20e-08!61;UBERON:0002036!1.20e-08!61;UBERON:0003082!1.20e-08!61;UBERON:0000490!2.29e-08!138;UBERON:0001637!2.43e-08!42;UBERON:0003509!2.43e-08!42;UBERON:0004572!2.43e-08!42;UBERON:0003914!2.47e-08!118;UBERON:0000914!4.36e-08!83;UBERON:0002329!4.36e-08!83;UBERON:0003077!4.36e-08!83;UBERON:0003059!4.36e-08!83;UBERON:0007282!4.36e-08!83;UBERON:0009618!4.36e-08!83;UBERON:0007285!4.36e-08!83;UBERON:0000486!5.61e-08!82;UBERON:0002385!1.77e-07!63;UBERON:0001015!1.77e-07!63;UBERON:0000383!1.77e-07!63;UBERON:0005256!2.90e-07!143;UBERON:0004573!2.98e-07!33;UBERON:0004571!2.98e-07!33;UBERON:0000055!3.34e-07!69;UBERON:0001737!3.82e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.79e-07;9!UBERON:0001557;3.79e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,3.31e-10,78;UBERON:0002049,3.89e-10,78;UBERON:0007798,3.89e-10,78;UBERON:0003914,1.14e-08,117;UBERON:0007524,1.87e-08,73;UBERON:0000490,1.88e-08,148;UBERON:0002329,2.36e-08,71;UBERON:0003059,2.36e-08,71;UBERON:0007282,2.36e-08,71;UBERON:0004290,2.36e-08,71;UBERON:0009618,2.36e-08,71;UBERON:0001637,2.43e-08,42;UBERON:0003509,2.43e-08,42;UBERON:0004572,2.43e-08,42;UBERON:0003077,3.63e-08,72;UBERON:0007285,3.63e-08,72;UBERON:0001134,3.64e-08,62;UBERON:0002036,3.64e-08,62;UBERON:0003082,3.64e-08,62;UBERON:0000486,1.36e-07,83;UBERON:0000055,1.41e-07,68;UBERON:0004573,2.98e-07,33;UBERON:0004571,2.98e-07,33;UBERON:0001737,3.82e-07,9;UBERON:0002385,4.71e-07,64;UBERON:0001015,4.71e-07,64;UBERON:0000383,4.71e-07,64;UBERON:0005256,4.79e-07,122;UBERON:0007500,9.14e-07,59;UBERON:0001981,9.14e-07,59;UBERON:0004537,9.14e-07,59;UBERON:0006965,9.14e-07,59 | |||
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| |||
|short_description=p2@CNPY2 | |||
}} |
Revision as of 14:01, 11 January 2014
Short description: | p2@CNPY2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CNPY2_5end |
Coexpression cluster: | NA |
Association with transcript: | 3bp_to_ENST00000553164_5end |
EntrezGene: | CNPY2 |
HGNC: | 13529 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 5.31e-19 | 250 |
mesodermal cell | 1.84e-14 | 121 |
muscle precursor cell | 5.35e-11 | 58 |
myoblast | 5.35e-11 | 58 |
multi-potent skeletal muscle stem cell | 5.35e-11 | 58 |
smooth muscle cell | 5.55e-11 | 43 |
smooth muscle myoblast | 5.55e-11 | 43 |
electrically responsive cell | 3.73e-10 | 61 |
electrically active cell | 3.73e-10 | 61 |
vascular associated smooth muscle cell | 5.74e-10 | 32 |
muscle cell | 1.01e-09 | 55 |
epithelial cell | 3.30e-09 | 253 |
stem cell | 6.87e-07 | 441 |
pigment cell | 8.61e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 3.31e-10 | 78 |
vasculature | 3.89e-10 | 78 |
vascular system | 3.89e-10 | 78 |
epithelial tube | 1.14e-08 | 117 |
dense mesenchyme tissue | 1.87e-08 | 73 |
unilaminar epithelium | 1.88e-08 | 148 |
somite | 2.36e-08 | 71 |
presomitic mesoderm | 2.36e-08 | 71 |
presumptive segmental plate | 2.36e-08 | 71 |
dermomyotome | 2.36e-08 | 71 |
trunk paraxial mesoderm | 2.36e-08 | 71 |
artery | 2.43e-08 | 42 |
arterial blood vessel | 2.43e-08 | 42 |
arterial system | 2.43e-08 | 42 |
paraxial mesoderm | 3.63e-08 | 72 |
presumptive paraxial mesoderm | 3.63e-08 | 72 |
skeletal muscle tissue | 3.64e-08 | 62 |
striated muscle tissue | 3.64e-08 | 62 |
myotome | 3.64e-08 | 62 |
multilaminar epithelium | 1.36e-07 | 83 |
vessel | 1.41e-07 | 68 |
systemic artery | 2.98e-07 | 33 |
systemic arterial system | 2.98e-07 | 33 |
larynx | 3.82e-07 | 9 |
muscle tissue | 4.71e-07 | 64 |
musculature | 4.71e-07 | 64 |
musculature of body | 4.71e-07 | 64 |
trunk mesenchyme | 4.79e-07 | 122 |
epithelial tube open at both ends | 9.14e-07 | 59 |
blood vessel | 9.14e-07 | 59 |
blood vasculature | 9.14e-07 | 59 |
vascular cord | 9.14e-07 | 59 |