FFCP PHASE1:Hg19::chr14:102290136..102290143,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5527 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9311 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-71bp_to_ENST00000553842_5end | |||
|coexpression_cluster_id=C8 | |||
|description=CAGE_peak_18_at_PPP2R5C_5end | |||
|id=chr14:102290136..102290143,+ | |||
|ontology_enrichment_celltype=CL:0000838!1.87e-31!52;CL:0000542!1.17e-30!53;CL:0000051!1.17e-30!53;CL:0002087!5.68e-29!119;CL:0000791!6.43e-29!18;CL:0000789!6.43e-29!18;CL:0002420!6.43e-29!18;CL:0002419!6.43e-29!18;CL:0000790!6.43e-29!18;CL:0000738!8.21e-29!140;CL:0002031!3.48e-23!124;CL:0000084!7.53e-22!25;CL:0000827!7.53e-22!25;CL:0000037!2.28e-20!172;CL:0000566!2.28e-20!172;CL:0000988!3.26e-19!182;CL:0002032!9.52e-19!165;CL:0000837!9.52e-19!165;CL:0000625!2.50e-17!11;CL:0000624!5.80e-12!6;CL:0000945!7.14e-08!24;CL:0000826!7.14e-08!24;CL:0000623!1.84e-07!3;CL:0000825!1.84e-07!3;CL:0000898!9.41e-07!3;CL:0002057!9.58e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000625;2.65e-29;11!CL:0000623;1.07e-28;3!CL:0000791;6.03e-24;18!CL:0000789;6.03e-24;18!CL:0002419;6.03e-24;18!CL:0000084;4.66e-17;25!CL:0000767;2.79e-13;3!CL:0000094;7.43e-11;8!CL:0000542;2.10e-09;53!CL:0000081;4.96e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,1.54e-29,11;CL:0000623,9.79e-29,3;CL:0000825,9.79e-29,3;CL:0000791,4.90e-24,18;CL:0000789,4.90e-24,18;CL:0002420,4.90e-24,18;CL:0002419,4.90e-24,18;CL:0000790,4.90e-24,18;CL:0000084,4.02e-17,25;CL:0000827,4.02e-17,25;CL:0000838,3.91e-16,52;CL:0000542,8.41e-16,53;CL:0000051,8.41e-16,53;CL:0000767,2.79e-13,3;CL:0000094,6.95e-11,8;CL:0000738,9.79e-11,136;CL:0000037,2.96e-08,168;CL:0000081,4.73e-08,11;CL:0002087,8.54e-08,115;CL:0000988,1.02e-07,177;CL:0002032,2.12e-07,161;CL:0000837,2.12e-07,161 | |||
|ontology_enrichment_development_v019=CL:0000790;6.03e-24;18!CL:0000051;2.10e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!7.81e-08!7;UBERON:0002390!8.06e-08!102;UBERON:0003061!8.06e-08!102;UBERON:0001042!3.70e-07!10;UBERON:0009145!3.70e-07!10;UBERON:0002193!4.39e-07!112;UBERON:0002370!8.08e-07!4;UBERON:0005058!8.08e-07!4;UBERON:0009113!8.08e-07!4;UBERON:0003295!8.08e-07!4;UBERON:0005562!8.08e-07!4;UBERON:0000178!8.20e-07!15;UBERON:0000179!8.20e-07!15;UBERON:0000463!8.20e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002426;2.74e-10;1!UBERON:0003831;2.74e-10;1!UBERON:0003898;2.74e-10;1!UBERON:0004830;2.74e-10;1!UBERON:0003830;2.74e-10;1!UBERON:0005175;2.74e-10;1!UBERON:0001774;2.74e-10;1!UBERON:0001103;2.74e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002426,1.73e-10,1;UBERON:0003831,1.73e-10,1;UBERON:0003898,1.73e-10,1;UBERON:0004830,1.73e-10,1;UBERON:0003830,1.73e-10,1;UBERON:0005175,1.73e-10,1;UBERON:0001774,1.73e-10,1;UBERON:0001103,1.73e-10,1;UBERON:0010084,1.73e-10,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.157421562627358,1.18009283054671,5.75744097145819,0,0,0,0,0.387336002901508,0.142169232487422,0,0.553995408531877,0.802177789880567,0.434021741431704,0,0,0,0.290796477559129,0,0,0.232429036905685,0,0,0.575384784644301,0.512321413058201,0.47296445977717,0,0,0,0,0.545812300115692,0.224723484445085,0,0,0,0,0.398927315243264,0,0,0,0,0.251248665256743,0,0.217188844705117,0.605399502633369,0,0,0,0,0,0,0,0,0.285012743741249,0.19891667719909,0,0,0.546138611262131,0,0.853460445133014,0,0.574752439954483,0,0,0,0.587237189370939,0.382273228125229,0,0.560508562981536,0,0.983548850569165,0.786021525498329,1.02800749499755,0.668745981562712,0.977766799900771,0.946895611469467,0,0.222820913770347,0.883817722424512,0.443067789167242,1.08321545506006,0.384273959177026,0.910415432919148,0.657751618414705,0.829050053357545,0.869409257205157,0.593146252648242,0.802622484269139,1.04535523804977,0.906474741580529,0.766440987203842,4.12352934579156,2.02415753615602,0.637130828648193,0.651083453856419,1.90090408889675,1.35517607169996,0.895906278080929,2.49861453104692,0.473554504088034,0,2.41928091869679,2.94184215361858,1.30341963494519,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,2.75843064282698,3.88129634747131,3.85029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.431428401637234,1.06727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0,0.569647187174163,0.476463550915578,0,0,1.08006287447623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828851746593443,0,0,0.369254416383208,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0,0.104421949505455,0,1.60515529459758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0.201550417460179,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,1.38328142328561,0.852548188666271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0,0.327130788511688,0,0,0,0.79994958341972,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.0644578879735772,0.299823467774787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.124149428591716,0,0,0,0.217716747896961,0.342233301085281,0.134704106029175,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p18@PPP2R5C | |||
}} |
Revision as of 22:02, 11 January 2014
Short description: | p18@PPP2R5C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_PPP2R5C_5end |
Coexpression cluster: | C8_Natural_CD8_Basophils_CD4_CD14_Peripheral_CD34 |
Association with transcript: | -71bp_to_ENST00000553842_5end |
EntrezGene: | PPP2R5C |
HGNC: | 9311 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 1.54e-29 | 11 |
natural killer cell | 9.79e-29 | 3 |
pro-NK cell | 9.79e-29 | 3 |
mature alpha-beta T cell | 4.90e-24 | 18 |
alpha-beta T cell | 4.90e-24 | 18 |
immature T cell | 4.90e-24 | 18 |
mature T cell | 4.90e-24 | 18 |
immature alpha-beta T cell | 4.90e-24 | 18 |
T cell | 4.02e-17 | 25 |
pro-T cell | 4.02e-17 | 25 |
lymphoid lineage restricted progenitor cell | 3.91e-16 | 52 |
lymphocyte | 8.41e-16 | 53 |
common lymphoid progenitor | 8.41e-16 | 53 |
basophil | 2.79e-13 | 3 |
granulocyte | 6.95e-11 | 8 |
leukocyte | 9.79e-11 | 136 |
hematopoietic stem cell | 2.96e-08 | 168 |
blood cell | 4.73e-08 | 11 |
nongranular leukocyte | 8.54e-08 | 115 |
hematopoietic cell | 1.02e-07 | 177 |
hematopoietic oligopotent progenitor cell | 2.12e-07 | 161 |
hematopoietic multipotent progenitor cell | 2.12e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
chest muscle | 1.73e-10 | 1 |
respiratory system muscle | 1.73e-10 | 1 |
skeletal muscle of trunk | 1.73e-10 | 1 |
respiratory system skeletal muscle | 1.73e-10 | 1 |
thoracic segment muscle | 1.73e-10 | 1 |
chest organ | 1.73e-10 | 1 |
muscle of trunk | 1.73e-10 | 1 |
diaphragm | 1.73e-10 | 1 |
future diaphragm | 1.73e-10 | 1 |