FFCP PHASE1:Hg19::chr16:30076052..30076069,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=226 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=414 | |||
|TSSclassifier=strong | |||
|UniProt=P04075 | |||
|association_with_transcript=79bp_to_ENST00000412304,uc002dwa.3_5end | |||
|coexpression_cluster_id=C31 | |||
|description=CAGE_peak_5_at_ALDOA_5end | |||
|id=chr16:30076052..30076069,+ | |||
|ontology_enrichment_celltype=CL:0000192!3.34e-11!42;CL:0000514!3.34e-11!42;CL:0000183!1.76e-09!59;CL:0000359!2.73e-09!32;CL:0000680!6.03e-09!57;CL:0000056!6.03e-09!57;CL:0000355!6.03e-09!57;CL:0000187!1.46e-08!54;CL:0000393!1.46e-07!60;CL:0000211!1.46e-07!60;CL:0000055!4.36e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0000192;1.23e-08;43!CL:0000359;4.23e-08;32!CL:0000136;6.87e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,1.18e-10,43;CL:0000514,1.18e-10,43;CL:0000359,2.24e-08,32;CL:0000680,5.37e-08,58;CL:0000056,5.37e-08,58;CL:0000355,5.37e-08,58;CL:0000187,7.62e-08,55;CL:0000393,1.32e-07,61;CL:0000211,1.32e-07,61;CL:0000136,4.36e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000514;1.23e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.90e-16!365;UBERON:0000481!3.49e-16!347;UBERON:0003104!4.16e-12!238;UBERON:0009142!4.16e-12!238;UBERON:0001134!5.88e-11!61;UBERON:0002036!5.88e-11!61;UBERON:0003082!5.88e-11!61;UBERON:0000477!8.26e-11!286;UBERON:0002100!1.06e-10!216;UBERON:0002385!1.28e-10!63;UBERON:0001015!1.28e-10!63;UBERON:0000383!1.28e-10!63;UBERON:0004290!1.46e-10!70;UBERON:0000119!1.56e-10!312;UBERON:0000483!3.98e-10!309;UBERON:0005256!1.19e-09!143;UBERON:0000914!3.19e-09!83;UBERON:0002329!3.19e-09!83;UBERON:0003077!3.19e-09!83;UBERON:0003059!3.19e-09!83;UBERON:0007282!3.19e-09!83;UBERON:0009618!3.19e-09!83;UBERON:0007285!3.19e-09!83;UBERON:0000468!1.09e-08!659;UBERON:0004111!1.90e-08!241;UBERON:0000486!3.79e-08!82;UBERON:0000025!6.97e-08!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.45e-08;9!UBERON:0001557;3.45e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,1.56e-10,160;UBERON:0009142,1.56e-10,160;UBERON:0001134,2.64e-10,62;UBERON:0002036,2.64e-10,62;UBERON:0003082,2.64e-10,62;UBERON:0002385,4.34e-10,64;UBERON:0001015,4.34e-10,64;UBERON:0000383,4.34e-10,64;UBERON:0007503,1.65e-09,78;UBERON:0007524,2.92e-09,73;UBERON:0003077,4.77e-09,72;UBERON:0007285,4.77e-09,72;UBERON:0002329,7.39e-09,71;UBERON:0003059,7.39e-09,71;UBERON:0007282,7.39e-09,71;UBERON:0004290,7.39e-09,71;UBERON:0009618,7.39e-09,71;UBERON:0005256,1.69e-08,122;UBERON:0001737,3.26e-08,9;UBERON:0002100,3.55e-08,199;UBERON:0003103,2.70e-07,68;UBERON:0001557,6.67e-07,19 | |||
|phase1_expression=1.63510541343501,11.3473277662221,3.80576891059122,1.0007329835313,13.4088328328186,2.61701557230111,17.7309914717817,1.26343974685366,15.4099520637905,3.44027511102112,6.28021051175185,0,0.263766978228454,0.495065411840187,0.994192127183747,0.672325146451775,0.602694528023977,0.730310090387373,1.95173119516203,0.984968464614303,2.65200898617529,1.25381888591235,0.572471974262113,0.410623275218653,0.251085279189606,0.229240217243854,0.0821005894499457,0.0787107813136792,0.393364276848904,0.383829398097213,0.464448369948228,0.919421224478927,0.90361775633475,0.739508020333575,1.16200800870452,0.284338464974843,0,0,0.601633342410425,0,0,0.647787332037959,0.257575567634187,0.145398238779565,0,0.242584061187816,0,0,0,0,0,0.47296445977717,0,0,0,0,0,0,0,0,0,0,0.398927315243264,0,0,0.56738522469114,0,0.502497330513487,0,0.217188844705117,7.87019353423379,0.368277635987565,0.316462387440884,0.422510572623884,0,1.04829322754188,0.112328631146495,0.150176892841506,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0.205601498999509,0.167186495390678,0,0,0,0.111410456885174,0.294605907474837,0.221533894583621,0,0.128091319725675,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15076305659177,1.80719576192283,2.00535164254356,0.144846518960824,1.5905718941022,1.94653948121054,0.378139268656271,0.886917589850256,0.87834785693126,0.523916301990851,0.364295288292542,0.741568885568859,0,0.696518949197069,0.398873881556595,0,0,0,0.39752481473341,0,0,1.13061588384802,0.419499436209906,0.275118041940067,0.417989933073621,0.516833518338658,0.35576626268671,0,0,0.760272105718513,0.24406205754817,0,0,0.535798369704479,0.22452937262617,0.225222960966644,3.06633274931766,0,0.916008719652036,0,0,1.3082821564276,0.993943903390637,0.633152558322899,1.58891016975863,0.860509862246441,0.354668382198357,2.24271040056923,0,1.2333377420858,0,0,0.490385709340376,3.17850598054356,0.576175924479999,1.17160715916898,1.24864030732128,1.71141546463335,0.896692083310806,0.704606991862589,0.971237666208789,0.421352420106746,0.816616685019573,0.737005903870608,0.309977343527296,2.37600571456411,0.494533858557114,2.73048408581408,2.15585442544872,0.505008341862199,0.625592599359821,0,1.31693286264251,0.612975591598039,1.05166641234618,1.13432183160021,0.358779271377724,0.213557388818567,0.635795703478686,1.20036438433761,0.92747276314595,1.8034837803194,0.37223371266318,0.843881661206331,0.584622030967192,2.27190396819703,0.828449087780694,0.646584227275248,1.77504796258307,1.0075209822764,0.339121184620975,0.193260853163297,0.545492241181669,0,0.853815942907168,1.06023814657188,3.60201222895507,3.10983165046111,4.54177531576131,3.28479623168247,0,0.643240938192885,1.38134921352481,0.464367928031979,1.44375896333917,6.27026040211173,5.90046415273356,5.54325368732009,6.28675644574646,7.62578054323422,4.98268300133303,6.47190279168789,7.06397274451246,5.77120735419586,0.738155454624648,2.80483547606892,0,0,1.26755034821831,0.982827216677626,0.590789906681404,0,0.860919069801795,0.857839051492628,0.439001141634502,0,0.100528972411631,0.0925884451585296,1.3032332212413,1.03993478527958,1.44331342025273,0.231860809950154,0.587043471179108,0.288732895522148,0,0.761016608938393,8.69224837755203,7.72637545885385,0.246217006087397,0.234004265139238,0.594524649154913,0,0.503946384596579,0.141775097242386,0.716468181622786,0.290633938513962,1.15014803749563,0,0.088048434013226,0,0,0.12624243342638,0.190493682876507,0.381988425558278,0,3.4214489204541,0.411309970813294,0,0.285826432630578,0.784917590417525,2.1798003441664,1.54010400223995,1.29271715757778,3.57656445851882,0.845302752556,2.12750493267896,0,2.82928111688356,2.83698264046557,2.1313774321288,1.57275793023962,2.17048642156577,1.64648067356154,0.325736184293735,2.48774364119782,3.95975936466715,2.1100756394171,2.61460037580088,0.699810938274399,0,0,0,5.5113716763064,3.44585807502342,0,1.73737568001095,0.821905290201534,1.43248770591916,0.224170287987055,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0.736148950314839,1.00034104211935,1.89885516589815,1.24782516918484,1.78428988797162,0.473107245101804,1.28855556491985,1.80567659836631,0,0,0.664225598535437,1.29058417979192,1.47702144595741,5.09083009403126,6.17658162859541,0,0,0,0.303127571446259,3.32870879020994,0.604780586659361,1.24053903909388,0.767309866440312,0.561320188866147,1.02511319404561,0.511707249066704,0.965123526861645,2.96836132889982,0.925258162815933,1.42049380250502,0.574890092096664,1.03850885836724,0.929683027679674,1.20859449591622,4.0101294060657,0.184161977871793,4.13332013392584,3.45973219212762,2.22911505431021,0,0.308061348417659,0,5.84556898613043,0.316654886678627,1.13733384070897,0.340187410553031,0.431831832204279,1.54227252690289,2.43851793789468,1.00337954770971,0,2.49322802678617,0.671624264166535,0,0,1.79515087581472,0.984043937099117,0.325378394664303,0.206082023295445,0.366277859273374,0.82509499920588,0,0,0,0.193341436584244,1.07834031980251,1.22802939780904,1.102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|short_description=p5@ALDOA | |||
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Revision as of 03:07, 12 January 2014
Short description: | p5@ALDOA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ALDOA_5end |
Coexpression cluster: | C31_skeletal_tongue_diaphragm_throat_penis_skin_trachea |
Association with transcript: | 79bp_to_ENST00000412304, uc002dwa.3_5end |
EntrezGene: | ALDOA |
HGNC: | 414 |
UniProt: | P04075 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 1.18e-10 | 43 |
smooth muscle myoblast | 1.18e-10 | 43 |
vascular associated smooth muscle cell | 2.24e-08 | 32 |
muscle precursor cell | 5.37e-08 | 58 |
myoblast | 5.37e-08 | 58 |
multi-potent skeletal muscle stem cell | 5.37e-08 | 58 |
muscle cell | 7.62e-08 | 55 |
electrically responsive cell | 1.32e-07 | 61 |
electrically active cell | 1.32e-07 | 61 |
fat cell | 4.36e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
mesenchyme | 1.56e-10 | 160 |
entire embryonic mesenchyme | 1.56e-10 | 160 |
skeletal muscle tissue | 2.64e-10 | 62 |
striated muscle tissue | 2.64e-10 | 62 |
myotome | 2.64e-10 | 62 |
muscle tissue | 4.34e-10 | 64 |
musculature | 4.34e-10 | 64 |
musculature of body | 4.34e-10 | 64 |
epithelial vesicle | 1.65e-09 | 78 |
dense mesenchyme tissue | 2.92e-09 | 73 |
paraxial mesoderm | 4.77e-09 | 72 |
presumptive paraxial mesoderm | 4.77e-09 | 72 |
somite | 7.39e-09 | 71 |
presomitic mesoderm | 7.39e-09 | 71 |
presumptive segmental plate | 7.39e-09 | 71 |
dermomyotome | 7.39e-09 | 71 |
trunk paraxial mesoderm | 7.39e-09 | 71 |
trunk mesenchyme | 1.69e-08 | 122 |
larynx | 3.26e-08 | 9 |
trunk | 3.55e-08 | 199 |
compound organ | 2.70e-07 | 68 |
upper respiratory tract | 6.67e-07 | 19 |