FFCP PHASE1:Hg19::chr16:81812884..81812907,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5336 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9066 | |||
|TSSclassifier=strong | |||
|UniProt=P16885 | |||
|association_with_transcript=0bp_to_ENST00000359376,NM_002661_5end | |||
|coexpression_cluster_id=C498 | |||
|description=CAGE_peak_1_at_PLCG2_5end | |||
|id=chr16:81812884..81812907,+ | |||
|ontology_enrichment_celltype=CL:0000037!2.72e-55!172;CL:0000566!2.72e-55!172;CL:0002032!6.87e-53!165;CL:0000837!6.87e-53!165;CL:0000988!6.98e-49!182;CL:0000738!3.02e-48!140;CL:0002031!2.38e-38!124;CL:0000763!3.22e-38!112;CL:0000049!3.22e-38!112;CL:0002087!8.18e-37!119;CL:0000766!1.19e-30!76;CL:0000557!1.79e-27!71;CL:0000839!5.44e-25!70;CL:0002009!6.49e-24!65;CL:0002194!6.60e-23!63;CL:0000576!6.60e-23!63;CL:0000040!6.60e-23!63;CL:0000559!6.60e-23!63;CL:0002057!3.83e-21!42;CL:0000860!1.38e-18!45;CL:0000945!1.33e-15!24;CL:0000826!1.33e-15!24;CL:0000542!1.20e-12!53;CL:0000051!1.20e-12!53;CL:0000838!3.99e-12!52;CL:0000236!1.96e-10!14 | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.19e-16;24!CL:0000860;2.82e-16;33!CL:0002057;2.82e-16;33!CL:0000473;4.66e-16;39!CL:0000234;4.66e-16;39!CL:0000576;7.38e-16;48!CL:0000766;4.59e-15;69!CL:0000763;1.31e-12;100!CL:0000738;4.53e-12;136!CL:0002087;1.14e-11;104!CL:0000236;2.90e-10;13!CL:0000988;3.53e-09;177!CL:0000542;1.32e-07;53!CL:0000451;6.77e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,4.51e-60,168;CL:0002032,1.51e-57,161;CL:0000837,1.51e-57,161;CL:0000988,3.43e-53,177;CL:0000738,5.63e-53,136;CL:0000763,2.06e-43,108;CL:0000049,2.06e-43,108;CL:0002031,2.19e-42,120;CL:0002087,8.93e-41,115;CL:0000766,4.46e-36,72;CL:0000557,1.27e-32,67;CL:0000839,8.52e-30,66;CL:0002009,9.50e-29,61;CL:0002194,1.17e-27,59;CL:0000576,1.17e-27,59;CL:0000040,1.17e-27,59;CL:0000559,1.17e-27,59;CL:0000473,6.18e-25,48;CL:0000234,6.18e-25,48;CL:0000860,3.56e-22,42;CL:0002057,3.56e-22,42;CL:0000945,2.43e-16,24;CL:0000826,2.43e-16,24;CL:0000542,2.10e-12,53;CL:0000051,2.10e-12,53;CL:0000838,7.23e-12,52;CL:0000236,6.69e-11,14;CL:0000451,6.96e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002057;4.43e-16;42!CL:0000049;3.30e-12;108!CL:0000051;1.32e-07;53 | |||
|ontology_enrichment_disease=DOID:2531!3.26e-09!51;DOID:0060083!3.26e-09!51;DOID:1240!4.13e-08!39;DOID:8692!2.02e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.78e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.49e-09,51;DOID:0060083,2.49e-09,51;DOID:1240,2.70e-08,39;DOID:8692,1.28e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0002193!6.74e-29!112;UBERON:0002390!1.83e-27!102;UBERON:0003061!1.83e-27!102;UBERON:0002371!1.86e-21!80;UBERON:0001474!2.18e-20!86;UBERON:0002405!6.25e-18!115;UBERON:0007023!6.00e-14!115;UBERON:0004765!4.25e-13!101;UBERON:0001434!4.25e-13!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.69e-33,108;UBERON:0002390,3.66e-32,98;UBERON:0003061,3.66e-32,98;UBERON:0002405,6.14e-29,93;UBERON:0002371,6.15e-26,76;UBERON:0001474,1.04e-24,82;UBERON:0004765,1.03e-19,90;UBERON:0001434,3.35e-15,100;UBERON:0007023,8.81e-15,114;UBERON:0003081,4.12e-07,203 | |||
|phase1_expression=0,0.428201047781966,0.281908808191942,0,0.446961094427288,0,0,0.631719873426831,0,0.982935746006035,0,0.655324116390517,1.05506791291381,0,0,0.672325146451775,0,0,0,3.20114750999649,2.24400760368678,0.940364164434263,0.572471974262113,0,0.251085279189606,63.7287803937914,55.4999984681633,60.8434339554741,47.5970774987174,24.5650814782216,30.653592416583,0.919421224478927,1.8072355126695,0.369754010166788,96.059328719574,90.7039703269749,16.4416246027514,37.1176923716358,30.8838449104018,32.7686414780936,29.1090116511902,24.2920249514235,27.8181613044921,34.750179068316,35.1424627630593,44.1502991361825,28.1239134655878,46.4619713464663,39.023002732783,31.6461631554366,34.8378560879577,39.7290146212823,32.7508396699788,46.4748972180355,37.9194162464157,34.0718634572114,34.6590810573464,40.4502272001152,40.0969899005882,41.07891546574,46.032273057531,39.2523047222192,31.7147215618395,45.6060483069983,32.79364396503,41.9865066271443,45.466024176677,25.8786125214446,33.8963896973131,44.5237131645489,35.7185706553688,42.3519281385699,35.7602497808199,42.6735678350122,32.5284578946517,30.6101622442229,36.6191337537574,38.1449307817426,51.5929133297627,43.3219370486698,40.1811687942162,54.6165819756256,112.637596455247,116.327524198834,97.846017924991,84.9193142907349,104.102956629363,113.226230671033,96.5125514265899,108.762128017032,150.272223844894,133.890079176574,136.853815668832,17.1822727152734,21.2993253932984,18.1735018494803,0.196709770113833,0.393010762749165,0.822405995998037,1.67186495390678,0.651844533267181,0,0,1.6711568532776,0.589211814949674,0.221533894583621,0,1.79327847615945,1.69077151827842,4.93313713811028,3.31620021343018,1.44901542867526,0.296573126324121,0,0,1.69964014046349,0,2.06176467289578,2.02415753615602,6.05274287215784,11.0684187155591,5.70271226669025,7.82990619204418,9.98295567004463,11.2437653897111,14.680189626729,13.9591759476578,4.83856183739358,9.36040685242276,7.82051780967114,0,0.670700859703636,0.12786256184353,0,0,0.289693037921647,2.3858578411533,0,0.945348171640679,0.886917589850256,1.22968699970376,11.1987109550544,1.09288586487763,0.741568885568859,57.1203412832243,59.2041106817509,48.3966976288669,27.903403043725,25.7397709851058,27.4878550983878,2.78267370313387,4.30117297553062,4.51282652089873,1.69592382577203,1.67799774483962,4.12677062910101,3.55291443112578,6.97725249757188,11.7402866686614,13.3888245105868,10.0707329277287,6.84244895146661,17.5724681434682,4.77962004449629,6.48113558305408,6.96537880615822,11.900056749187,7.0945232704493,7.66583187329416,3.79706263827252,2.19842092716489,183.174780236128,174.501118866746,0.872188104285069,0,0,0.662045904066094,0,1.41867352879343,0,0,0,0,0,0.163461903113459,0.908144565869588,0.576175924479999,0.937285727335186,0,2.85235910772225,0,0.117434498643765,0.323745888736263,0.702254033511242,0.204154171254893,0.245668634623536,0,0,0,0,0.718618141816238,0,0.375355559615893,0,0,0,0,0.226864366320042,0,0,0,0,0.103052529238439,0,0,0.168776332241266,0,0,0,0,0,0.10075209822764,0,1.54608682530637,1.63647672354501,1.14721838155602,2.43947412259191,4.63854189125198,3.71820617182459,2.07322110030741,2.27088765788066,4.74470566798579,7.8224766164908,9.00537313470039,1.38134921352481,0,0,1.41968160047813,1.51726221070292,2.16909926895134,1.32352767278873,1.74303555273925,0.71181185733329,1.34831308160164,1.17732879075208,1.53898862778556,9.59602091012043,1.40241773803446,0.4115740113314,0,2.53510069643662,2.94848165003288,5.31710916013264,1.32438929824395,1.72183813960359,2.57351715447788,2.08525542276389,1.1240175325762,1.00528972411631,0.555530670951178,1.3032332212413,0,0,1.04337364477569,0.352226082707465,17.0352408358067,12.9635943521451,14.0788072653603,7.11183958163348,3.43394464837949,35.7014658826726,27.8465075515693,34.0365361641188,0.93733833986777,1.84780341018745,0.850650583454319,0.358234090811393,0.581267877027924,2.30029607499127,37.9350693179876,62.5143881493905,70.4915592838625,62.2598198761273,85.8448547299384,2.03193261734941,3.05590740446622,8.20522130470329,3.4214489204541,3.08482478109971,0.300343057843917,1.71495859578347,0.448524337381443,1.74384027533312,0.2933531432838,0.129271715757778,0,0,0,0,0,0,0.799266537048298,0.285955987316295,0,0,1.30294473717494,0,0.791951872933429,0.904318131178758,0.871533458600294,0.99972991182057,36.4871341923571,41.6873385888665,23.1917333431335,0,0,0,1.01346914667305,0.61642896765115,0.895304816199478,22.9774545186731,24.8258757854428,16.8189508390424,23.6151186754737,0,0,0.773288812777695,0.502548796003046,0,137.068285382334,161.547187970173,213.423989419558,0,1.00034104211935,0,0,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0.60818530127658,0,0,29.1542916833271,25.0228472949596,22.9464249277405,0.606255142892519,0,0.907170879989041,0,0.153461973288062,0,0.256278298511402,0,0.160853921143607,0,0.308419387605311,0,0.164254312027618,0.519254429183621,0,2.05461064305758,0.802025881213139,1.38121483403844,0.114814448164607,0,0.262248829918848,4.9631957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| |||
|short_description=p1@PLCG2 | |||
}} |
Revision as of 12:27, 20 January 2014
Short description: | p1@PLCG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PLCG2_5end |
Coexpression cluster: | C498_Eosinophils_Neutrophils_CD19_Burkitt_diffuse_lymphoma_CD14 |
Association with transcript: | 0bp_to_ENST00000359376, NM_002661_5end |
EntrezGene: | PLCG2 |
HGNC: | 9066 |
UniProt: | P16885 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 4.51e-60 | 168 |
hematopoietic oligopotent progenitor cell | 1.51e-57 | 161 |
hematopoietic multipotent progenitor cell | 1.51e-57 | 161 |
hematopoietic cell | 3.43e-53 | 177 |
leukocyte | 5.63e-53 | 136 |
myeloid cell | 2.06e-43 | 108 |
common myeloid progenitor | 2.06e-43 | 108 |
hematopoietic lineage restricted progenitor cell | 2.19e-42 | 120 |
nongranular leukocyte | 8.93e-41 | 115 |
myeloid leukocyte | 4.46e-36 | 72 |
granulocyte monocyte progenitor cell | 1.27e-32 | 67 |
myeloid lineage restricted progenitor cell | 8.52e-30 | 66 |
macrophage dendritic cell progenitor | 9.50e-29 | 61 |
monopoietic cell | 1.17e-27 | 59 |
monocyte | 1.17e-27 | 59 |
monoblast | 1.17e-27 | 59 |
promonocyte | 1.17e-27 | 59 |
defensive cell | 6.18e-25 | 48 |
phagocyte | 6.18e-25 | 48 |
classical monocyte | 3.56e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.56e-22 | 42 |
lymphocyte of B lineage | 2.43e-16 | 24 |
pro-B cell | 2.43e-16 | 24 |
lymphocyte | 2.10e-12 | 53 |
common lymphoid progenitor | 2.10e-12 | 53 |
lymphoid lineage restricted progenitor cell | 7.23e-12 | 52 |
B cell | 6.69e-11 | 14 |
dendritic cell | 6.96e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.69e-33 | 108 |
hematopoietic system | 3.66e-32 | 98 |
blood island | 3.66e-32 | 98 |
immune system | 6.14e-29 | 93 |
bone marrow | 6.15e-26 | 76 |
bone element | 1.04e-24 | 82 |
skeletal element | 1.03e-19 | 90 |
skeletal system | 3.35e-15 | 100 |
adult organism | 8.81e-15 | 114 |
lateral plate mesoderm | 4.12e-07 | 203 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.49e-09 | 51 |
immune system cancer | 2.49e-09 | 51 |
leukemia | 2.70e-08 | 39 |
myeloid leukemia | 1.28e-07 | 31 |