FFCP PHASE1:Hg19::chr16:88278862..88278869,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:88278862..88278869,- | |||
|id=chr16:88278862..88278869,- | |||
|ontology_enrichment_celltype=CL:0000569!1.74e-09!4;CL:0000011!1.74e-09!4;CL:0002057!1.46e-08!42;CL:0000860!1.04e-07!45;CL:0000048!3.26e-07!430;CL:0000723!7.19e-07!436;CL:0000034!8.26e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000569;3.25e-28;4!CL:0000134;8.46e-27;55!CL:0000048;2.95e-23;58!CL:0000723;8.15e-23;61!CL:0000034;3.57e-18;69!CL:0000228;5.99e-08;1!CL:0002372;5.99e-08;1!CL:0002494;3.74e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000569,2.64e-28,4;CL:0000011,2.64e-28,4;CL:0000048,3.78e-09,427;CL:0000134,5.71e-09,354;CL:0000723,5.97e-09,433;CL:0002320,1.07e-08,361;CL:0000034,1.08e-08,441;CL:0000228,5.05e-08,1;CL:0002372,5.05e-08,1;CL:0000219,9.64e-08,386;CL:0002494,3.57e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000011;3.25e-28;4!UBERON:0003099;4.10e-08;1!UBERON:0003852;4.10e-08;1 | |||
|ontology_enrichment_disease=DOID:2394!1.05e-23!14;DOID:120!1.11e-13!27;DOID:193!1.94e-12!29 | |||
|ontology_enrichment_disease_v019=DOID:2394;3.62e-67;14!DOID:120;8.75e-34;27!DOID:193;2.66e-31;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.20e-67,14;DOID:120,9.43e-34,27;DOID:193,2.85e-31,29 | |||
|ontology_enrichment_uberon=UBERON:0000992!4.90e-12!13;UBERON:0002118!2.94e-11!5;UBERON:0004532!2.94e-11!5;UBERON:0002119!7.46e-09!4;UBERON:0004531!7.46e-09!4;UBERON:0004176!1.48e-07!22;UBERON:0003081!6.26e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0002118;2.80e-34;5!UBERON:0000992;2.16e-32;13!UBERON:0000991;1.23e-19;21!UBERON:0002119;9.96e-16;4!UBERON:0003134;1.21e-10;33!UBERON:0003100;3.83e-08;41!UBERON:0005705;4.10e-08;1!UBERON:0008193;4.10e-08;1!UBERON:0010912;4.10e-08;1!UBERON:0002514;4.10e-08;1!UBERON:0003457;4.10e-08;1!UBERON:0008907;4.10e-08;1!UBERON:0008001;4.10e-08;1!UBERON:0007213;4.10e-08;1!UBERON:0009891;4.10e-08;1!UBERON:0007914;4.10e-08;1!UBERON:0007375;4.10e-08;1!UBERON:0003323;4.10e-08;1!UBERON:0010258;4.10e-08;1!UBERON:0005253;4.10e-08;1!UBERON:0007842;4.10e-08;1!UBERON:0002397;4.10e-08;1!UBERON:0003113;4.10e-08;1!UBERON:0003277;4.10e-08;1!UBERON:0001709;4.10e-08;1!UBERON:0002244;4.10e-08;1!UBERON:0005620;4.10e-08;1!UBERON:0010364;4.10e-08;1!UBERON:0004288;4.10e-08;1!UBERON:0000474;1.64e-07;37!UBERON:0004458;5.07e-07;48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002118,2.62e-34,5;UBERON:0000992,2.11e-32,13;UBERON:0000991,1.22e-19,21;UBERON:0009196,1.22e-19,21;UBERON:0009117,1.22e-19,21;UBERON:0005564,1.22e-19,21;UBERON:0004176,1.07e-18,22;UBERON:0002119,1.02e-15,4;UBERON:0003134,1.18e-10,37;UBERON:0000474,1.18e-10,37;UBERON:0004458,8.13e-10,49;UBERON:0003100,1.68e-09,41;UBERON:0002323,2.41e-08,46;UBERON:0002384,2.50e-08,371;UBERON:0005705,4.40e-08,1;UBERON:0008193,4.40e-08,1;UBERON:0010912,4.40e-08,1;UBERON:0002514,4.40e-08,1;UBERON:0003457,4.40e-08,1;UBERON:0008907,4.40e-08,1;UBERON:0008001,4.40e-08,1;UBERON:0007213,4.40e-08,1;UBERON:0009891,4.40e-08,1;UBERON:0007914,4.40e-08,1;UBERON:0009292,4.40e-08,1;UBERON:0003099,4.40e-08,1;UBERON:0007375,4.40e-08,1;UBERON:0003323,4.40e-08,1;UBERON:0010258,4.40e-08,1;UBERON:0007842,4.40e-08,1;UBERON:0009494,4.40e-08,1;UBERON:0010042,4.40e-08,1;UBERON:0010045,4.40e-08,1;UBERON:0010259,4.40e-08,1;UBERON:0010359,4.40e-08,1;UBERON:0009526,4.40e-08,1;UBERON:0002397,4.40e-08,1;UBERON:0003113,4.40e-08,1;UBERON:0003277,4.40e-08,1;UBERON:0001709,4.40e-08,1;UBERON:0004066,4.40e-08,1;UBERON:0002244,4.40e-08,1;UBERON:0005620,4.40e-08,1;UBERON:0004362,4.40e-08,1;UBERON:0010364,4.40e-08,1;UBERON:0010046,4.40e-08,1;UBERON:0005868,4.40e-08,1;UBERON:0007238,4.40e-08,1;UBERON:0004288,4.40e-08,1;UBERON:0004068,4.40e-08,1;UBERON:0010334,4.40e-08,1;UBERON:0003852,4.40e-08,1;UBERON:0010253,4.40e-08,1;UBERON:0003133,5.99e-08,48;UBERON:0003886,6.12e-07,54;UBERON:0000926,8.08e-07,315;UBERON:0004120,8.08e-07,315;UBERON:0006603,8.08e-07,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0,0.123766352960047,0,0,0,0,0,0.246242116153576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0.217010870715852,0,0,0,0.145398238779565,0,0,0,0.411167888021826,0.309706370895104,0,0.256160706529101,0,0.689491361473237,1.29096936716765,1.35426486594342,0,0.818718450173537,0.449446968890169,0.306083892370903,1.28371610830437,0.639337125799041,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,5.56118559415519,0.286836620748814,0.354668382198357,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0.340296549480063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0.57191197463259,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0.718874566474748,1.14861935834114,2.85273810081437,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0.356857977594324,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0.153461973288062,0,0,0,0,0,0.154209693802656,0.532685175939381,0.574890092096664,0,0.697262270759755,0,0,0,0,0,0.131124414959424,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0.94443704049192,0,0.308033580176089,0,0,0.18532421910392,1.71749864090389,0,0,0,0,0,0,1.56989728039846,0,0,0,0.202182481573316,0,0,0,0,0,0,0.141405431953713,0,0.551365343546124,0,0,0,0,0,0.30982349809975,0,0,0.0982490410131212,0,0,3.79993743535795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0.140669416410513,0.111308705022906,0,0,0.19924798825107,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0.313932918407225,0,0,0,0,0.195984794828755,0.0870592065804026,0,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,2.08956724041624,2.33713309847224,0.554805861502613,7.57612021100357,0.754703705257725,2.66943366478961,7.7805623254954,16.6354016139563,7.61642282855624,3.84423389973048,6.21257391938439,0.449803112163605,2.32894435314389,2.48823724704513,1.32920857278997,2.08698024724694,6.16056196888596,5.71207818253193,4.06870733204662,11.4564655297612,2.90008504014719,7.4245401580559,5.17524655308201,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.17408349321616,0.3062454773532,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0.414432328326074,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr16:88278862..88278869,- | |||
}} |
Revision as of 12:44, 20 January 2014
Short description: | p@chr16:88278862..88278869, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:88278862..88278869, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac mesenchymal cell | 2.64e-28 | 4 |
migratory trunk neural crest cell | 2.64e-28 | 4 |
multi fate stem cell | 3.78e-09 | 427 |
mesenchymal cell | 5.71e-09 | 354 |
somatic stem cell | 5.97e-09 | 433 |
connective tissue cell | 1.07e-08 | 361 |
stem cell | 1.08e-08 | 441 |
multinucleate cell | 5.05e-08 | 1 |
myotube | 5.05e-08 | 1 |
motile cell | 9.64e-08 | 386 |
cardiocyte | 3.57e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.20e-67 | 14 |
female reproductive organ cancer | 9.43e-34 | 27 |
reproductive organ cancer | 2.85e-31 | 29 |