FFCP PHASE1:Hg19::chr17:30813779..30813786,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8851 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1775 | |||
|TSSclassifier=strong | |||
|UniProt=Q15078 | |||
|association_with_transcript=142bp_to_ENST00000313401_5end | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_15_at_CDK5R1_5end | |||
|id=chr17:30813779..30813786,+ | |||
|ontology_enrichment_celltype=CL:0000047!4.38e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002567;1.27e-19;3!CL:0002553;2.38e-15;1!CL:0000540;1.57e-10;6!CL:0000404;1.57e-10;6!CL:0000047;2.48e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,1.69e-19,3;CL:0000047,1.34e-16,8;CL:0002553,1.78e-15,1;CL:0000540,1.65e-10,6;CL:0000031,1.65e-10,6;CL:0000404,1.65e-10,6 | |||
|ontology_enrichment_development_v019=CL:0000031;1.57e-10;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.05e-33!82;UBERON:0005743!1.38e-31!86;UBERON:0002619!8.75e-31!22;UBERON:0000073!1.75e-30!94;UBERON:0001016!1.75e-30!94;UBERON:0001950!1.80e-30!20;UBERON:0002780!2.95e-30!41;UBERON:0001890!2.95e-30!41;UBERON:0006240!2.95e-30!41;UBERON:0003080!2.35e-29!42;UBERON:0000955!7.13e-29!69;UBERON:0006238!7.13e-29!69;UBERON:0001893!3.37e-27!34;UBERON:0001869!6.25e-27!32;UBERON:0001049!1.31e-26!57;UBERON:0005068!1.31e-26!57;UBERON:0006241!1.31e-26!57;UBERON:0007135!1.31e-26!57;UBERON:0000956!1.55e-26!25;UBERON:0000203!1.55e-26!25;UBERON:0002791!1.76e-25!33;UBERON:0002616!2.09e-25!59;UBERON:0002020!1.14e-24!34;UBERON:0003528!1.14e-24!34;UBERON:0003056!2.59e-19!61;UBERON:0007023!4.08e-18!115;UBERON:0004121!9.37e-18!169;UBERON:0003075!3.37e-17!86;UBERON:0007284!3.37e-17!86;UBERON:0000924!4.94e-17!173;UBERON:0006601!4.94e-17!173;UBERON:0002346!5.01e-16!90;UBERON:0000033!1.61e-15!123;UBERON:0000153!3.45e-15!129;UBERON:0007811!3.45e-15!129;UBERON:0001871!1.58e-13!7;UBERON:0002021!3.18e-11!5;UBERON:0000200!1.93e-09!6;UBERON:0000349!1.39e-07!5;UBERON:0002771!1.77e-07!3;UBERON:0001872!3.26e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;4.13e-24;20!UBERON:0002619;5.31e-22;22!UBERON:0000956;1.91e-19;25!UBERON:0000203;1.91e-19;25!UBERON:0002022;2.38e-15;1!UBERON:0002791;4.71e-14;32!UBERON:0001869;7.31e-14;32!UBERON:0002021;2.18e-12;5!UBERON:0003528;2.89e-12;34!UBERON:0002020;2.89e-12;34!UBERON:0001893;3.01e-12;34!UBERON:0002780;1.88e-10;41!UBERON:0001890;1.88e-10;41!UBERON:0001871;3.88e-09;6!UBERON:0001016;1.81e-08;83!UBERON:0001876;2.48e-08;2!UBERON:0000073;1.23e-07;53!UBERON:0002616;1.23e-07;53!UBERON:0000955;3.08e-07;68!UBERON:0000922;3.99e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,3.81e-24,20;UBERON:0002619,4.93e-22,22;UBERON:0000956,1.79e-19,25;UBERON:0000203,1.79e-19,25;UBERON:0001017,3.69e-16,81;UBERON:0002791,2.67e-15,32;UBERON:0001869,2.67e-15,32;UBERON:0002022,3.66e-15,1;UBERON:0001016,1.77e-14,89;UBERON:0003528,2.06e-14,34;UBERON:0002020,2.06e-14,34;UBERON:0001893,2.06e-14,34;UBERON:0002021,2.12e-12,5;UBERON:0002780,5.71e-12,41;UBERON:0001890,5.71e-12,41;UBERON:0003080,5.71e-12,41;UBERON:0006240,5.71e-12,41;UBERON:0000955,1.63e-09,68;UBERON:0006238,1.63e-09,68;UBERON:0000073,3.02e-09,53;UBERON:0002616,3.02e-09,53;UBERON:0001871,3.44e-09,6;UBERON:0001049,9.61e-09,56;UBERON:0005068,9.61e-09,56;UBERON:0006241,9.61e-09,56;UBERON:0007135,9.61e-09,56;UBERON:0001876,2.00e-08,2;UBERON:0003056,5.17e-08,61;UBERON:0011216,9.19e-08,223;UBERON:0004121,3.89e-07,171;UBERON:0000924,3.89e-07,171;UBERON:0006601,3.89e-07,171 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.0821005894499457,0.236132343941038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380987365753014,1.14596527667483,1.17217447210047,0,0.308482478109971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.128343036279748,0.254094624222463,1.30139853857622,0.773288812777695,2.17771144934653,2.55175500661265,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,1.9882952955326,0.562677665642051,0,0,0,0,0.276283915531148,0,0,0,0,0.0898683511473268,0.179021174675609,0,0,0,0,0.969332746095218,0.463840490809256,3.99227596002388,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0.87754158861589,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,5.50930970934882,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0.193978032976839,0,0,0,0,0.379864775735272,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.592713324460491,0,0.817220436669454,0,0,0,0,0,1.09349201984444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.732157589411779,0.751145584238999,0,0.110929051536852,0,0.276697269872462,0,0.303298235083296,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0.107824811396682,0,0,0,0,0,0,0,0,1.60114149657094,0,0,0.385375350578757,1.41696576325585,0.319267718114302,0.205116364240755,3.27693205088234,0.622415272177961,0.161475645631851,0,0.0981477185010256,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0.810451015420736,0,0.413373593002368,0.126831620387814,2.7348740450911,0,0,0,0,0,0.336283722218824,0,0.227662191351298,0,0.691403925334676,0,0.203909198930495,0.72350050919134,0,0,0,0.157115589916002,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0.109940516745429,0,0,0,0.470317296361523,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.815897882290976,2.18175345170189,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0,0,0.0645889098360061,0,0.112131862580613,0,0,0,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p15@CDK5R1 | |||
}} |
Revision as of 14:39, 20 January 2014
Short description: | p15@CDK5R1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_CDK5R1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 142bp_to_ENST00000313401_5end |
EntrezGene: | CDK5R1 |
HGNC: | 1775 |
UniProt: | Q15078 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 1.69e-19 | 3 |
neuronal stem cell | 1.34e-16 | 8 |
lung fibroblast | 1.78e-15 | 1 |
neuron | 1.65e-10 | 6 |
neuroblast | 1.65e-10 | 6 |
electrically signaling cell | 1.65e-10 | 6 |
Ontology term | p-value | n |
---|---|---|
neocortex | 3.81e-24 | 20 |
regional part of cerebral cortex | 4.93e-22 | 22 |
cerebral cortex | 1.79e-19 | 25 |
pallium | 1.79e-19 | 25 |
central nervous system | 3.69e-16 | 81 |
regional part of telencephalon | 2.67e-15 | 32 |
cerebral hemisphere | 2.67e-15 | 32 |
insula | 3.66e-15 | 1 |
nervous system | 1.77e-14 | 89 |
brain grey matter | 2.06e-14 | 34 |
gray matter | 2.06e-14 | 34 |
telencephalon | 2.06e-14 | 34 |
occipital lobe | 2.12e-12 | 5 |
regional part of forebrain | 5.71e-12 | 41 |
forebrain | 5.71e-12 | 41 |
anterior neural tube | 5.71e-12 | 41 |
future forebrain | 5.71e-12 | 41 |
brain | 1.63e-09 | 68 |
future brain | 1.63e-09 | 68 |
regional part of nervous system | 3.02e-09 | 53 |
regional part of brain | 3.02e-09 | 53 |
temporal lobe | 3.44e-09 | 6 |
neural tube | 9.61e-09 | 56 |
neural rod | 9.61e-09 | 56 |
future spinal cord | 9.61e-09 | 56 |
neural keel | 9.61e-09 | 56 |
amygdala | 2.00e-08 | 2 |
pre-chordal neural plate | 5.17e-08 | 61 |
organ system subdivision | 9.19e-08 | 223 |
ectoderm-derived structure | 3.89e-07 | 171 |
ectoderm | 3.89e-07 | 171 |
presumptive ectoderm | 3.89e-07 | 171 |