FFCP PHASE1:Hg19::chr17:76136828..76136842,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=147138 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=20474 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-57bp_to_AK097987_5end | |||
|coexpression_cluster_id=C80 | |||
|description=CAGE_peak_2_at_TMC8_5end | |||
|id=chr17:76136828..76136842,+ | |||
|ontology_enrichment_celltype=CL:0000763!1.67e-19!112;CL:0000049!1.67e-19!112;CL:0000557!1.80e-18!71;CL:0000839!3.85e-18!70;CL:0000860!7.31e-18!45;CL:0002009!2.00e-17!65;CL:0002057!6.69e-17!42;CL:0000766!1.52e-16!76;CL:0002194!5.47e-16!63;CL:0000576!5.47e-16!63;CL:0000040!5.47e-16!63;CL:0000559!5.47e-16!63;CL:0000037!2.59e-14!172;CL:0000566!2.59e-14!172;CL:0002032!1.20e-13!165;CL:0000837!1.20e-13!165;CL:0000738!1.87e-13!140;CL:0000988!2.90e-12!182;CL:0002031!5.47e-12!124;CL:0002087!1.46e-09!119;CL:0000451!7.75e-09!10;CL:0000990!4.29e-08!8;CL:0000066!2.40e-07!254;CL:0002076!2.51e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.15e-14;33!CL:0002057;8.15e-14;33!CL:0000453;1.52e-12;5!CL:0000451;2.90e-12;10!CL:0000990;3.45e-12;8!CL:0000473;2.27e-10;39!CL:0000234;2.27e-10;39!CL:0000244;1.04e-09;4!CL:0000731;1.04e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,2.08e-15,108;CL:0000049,2.08e-15,108;CL:0000557,4.78e-14,67;CL:0000453,1.54e-12,5;CL:0000990,3.12e-12,8;CL:0000451,3.12e-12,10;CL:0002009,3.71e-12,61;CL:0000860,6.23e-12,42;CL:0002057,6.23e-12,42;CL:0000839,1.35e-11,66;CL:0000473,4.44e-11,48;CL:0000234,4.44e-11,48;CL:0000766,4.06e-10,72;CL:0002194,4.60e-10,59;CL:0000576,4.60e-10,59;CL:0000040,4.60e-10,59;CL:0000559,4.60e-10,59;CL:0000244,1.00e-09,4;CL:0000731,1.00e-09,4;CL:0002032,6.83e-08,161;CL:0000837,6.83e-08,161;CL:0000037,9.25e-08,168;CL:0000988,6.44e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;2.42e-09;42 | |||
|ontology_enrichment_disease=DOID:305!6.24e-08!106;DOID:1749!5.31e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!1.17e-14!86;UBERON:0002371!4.07e-14!80;UBERON:0002193!9.25e-13!112;UBERON:0002405!1.05e-12!115;UBERON:0002390!3.66e-12!102;UBERON:0003061!3.66e-12!102;UBERON:0004765!1.57e-11!101;UBERON:0001434!1.57e-11!101;UBERON:0004119!5.38e-07!169;UBERON:0000925!5.38e-07!169;UBERON:0006595!5.38e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;9.90e-08;5!UBERON:0004177;2.27e-07;5!UBERON:0005057;2.27e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,2.58e-13,93;UBERON:0002371,1.45e-11,76;UBERON:0002390,3.74e-11,98;UBERON:0003061,3.74e-11,98;UBERON:0002193,2.49e-10,108;UBERON:0001474,3.16e-10,82;UBERON:0004765,1.17e-09,90;UBERON:0001434,5.02e-08,100;UBERON:0000365,9.64e-08,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0.246301768349837,0.157421562627358,0.393364276848904,0.383829398097213,0.154816123316076,0,0.6024118375565,0,0,0.142169232487422,0,0,0,0.434021741431704,0.223915474239924,0.971680998056939,0.257575567634187,0.726991193897824,0.377875943688809,0.242584061187816,0.464858073811369,0.411167888021826,2.47765096716083,0.575384784644301,1.7931249457037,1.18241114944293,1.37898272294647,1.93645405075148,2.70852973188684,1.12945403725563,1.63743690034707,1.12361742222542,0.612167784741805,2.56743221660875,2.55734850319616,0.329851300186716,1.39624560335142,2.13112375266347,0.290209238628584,0.56738522469114,2.4912889959823,0.75374599577023,1.0429658368404,4.12658804939722,0.605399502633369,4.05105399586321,2.53169909952708,0.211255286311942,0.212604299965044,0.209658645508376,0,0.150176892841506,0.32145117339416,1.14005097496499,0.39783335439818,0.547992461293902,0,0,0,0.426730222566507,0.400395987036012,0,0.661044872784862,0,0,0.587237189370939,0.764546456250458,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0.236777252044017,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.130979075497713,1.45718115317017,0.741568885568859,2.59637914923747,2.78607579678828,0.930705723632056,0.238490624305342,1.14398982156026,0.371457501329565,0,0.860234595106124,0.347140501607594,0,0.419499436209906,0,0.626984899610432,0,0.35576626268671,0.66944122552934,0.402829317109147,0,0.732186172644509,0,0,0.357198913136319,0,1.12611480483322,0,0,0.366403487860815,0,0,1.3082821564276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0.169560592310488,0.386521706326594,1.09098448236334,0.860413786167011,0.243947412259191,0.132529768321485,0,0.310983165046111,0,0.36497735907583,0,0,0,0,0,0.354920400119532,0.168584690078102,0,0.110293972732394,0,0,0.134831308160164,0,0,2.95262181849859,0,0,0,0,0,1.18157981336281,0,0,0,1.31700342490351,0,0.301586917234893,1.11106134190236,0,0,0,0,0,0.288732895522148,0.462985512576611,0.380508304469197,0,0,0.246217006087397,0,0,2.81201501960331,0.503946384596579,0.567100388969546,0.0895585227028483,0,0,0,0.528290604079356,4.97587477297853,1.58531948758658,1.00993946741104,0,0,0,0,0,0.300343057843917,0,0,0,0.07333828582095,0,3.57656445851882,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,1.50677127429638,0,0,0,0,0,0,0,0,0,0.431255149719035,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80455823272956,0.920809889358963,0,0,0,0.451199612907412,0.15403067420883,0,0,0.105551628892876,1.13733384070897,0.170093705276516,1.0795795805107,0,0,0,0.254876273045038,0,0,0.438519753291869,0.261435451024901,0,0,0,0.618246069886334,0.54941678891006,0.247528499761764,0,0,0,0,0,0,0,0,0,0,0,0.991709492165869,0.960950336825531,0.638063562472921,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962221127255121,0.670302275535787,2.17781969722645,0.470719003883896,11.6236450621232,3.36942951335251,13.7463347596369,3.67557440331135,0,0,0,0,0,0,0,0,0.106824071127473,0,2.69544237579135,0,0,0.0711418433484141,0,0,0,0.635020748171649,0,0,0,0,0,0,0,0,0,0.687010689511529,0,0,0.166849141711909,0,0,0,0,0.66614393599564,1.4098700508785,2.43282702530686,1.31857361344705,0,0,27.2770700934157,0.23874448473769,0,0.307160702099232,0,0,0.111308705022906,0,0,0.19924798825107,1.93398740871803,0,0.102268682502155,0.492339221844278,0,0.359473404589307,5.54965641494388,2.04628948090749,0.0986434056369336,0,0,0,0,0,0,0,0,0.341380344856499,15.7637263181515,1.41832609060762,0.689486746482929,0,0,0,0,0,0,0,0,0.21787692703798,2.92789862985067,1.00035336054936,0,0.23056390438806,0.0897576444097721,0,0.638002319463839,0,0,0,0.156980256395025,0.831058409500782,6.09108283666388,7.25431376975636,2.85296697858933,2.08729105996604,1.27149263184303,0.843992258112108,0.652931232636591,0,0.216388639742091,1.99052386215701,0.530745387020035,1.83309043480088,0,0,0,0,0,0,0,2.73930466504926,0,0,2.41981432097328,0,0,17.8884869103246,0.103688191397247,0,0.661983911750998,1.56966459203613,0,4.55375273647668,0.277349346026277,0.173559738335131,1.95984794828755,0.435296032902013,0.17472666824203,0.171986032471617,0.483781656445426,0.877071805034227,0.164230914106418,1.45483524732629,0,0.225980740780532,0,0,0,2.93327074102205,0.64127056201227,0.213452994739353,0.39961921916426,0.144090417154106,0,0.171594997861965,0.288109595976299,0,0.707082103850386,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,1.19807400299395,0,0,0.134366944973453,0,4.65983798109815,0,0,0,0,0.0846733320657845,0,0,0.160753148465019,0.137539436597234,0.83088067605837,143.533342809857,35.5948899096657,0,0,0.0788057072991982,0.157363764404994,0.844802692155252,0.179287339332845,0.383830394638891,0,0,0,0,0,0,0,0.65674016599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| |||
|short_description=p2@TMC8 | |||
}} |
Revision as of 17:37, 20 January 2014
Short description: | p2@TMC8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TMC8_5end |
Coexpression cluster: | C80_immature_migratory_CD14_Dendritic_splenic_cord_Mast |
Association with transcript: | -57bp_to_AK097987_5end |
EntrezGene: | TMC8 |
HGNC: | 20474 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 2.08e-15 | 108 |
common myeloid progenitor | 2.08e-15 | 108 |
granulocyte monocyte progenitor cell | 4.78e-14 | 67 |
Langerhans cell | 1.54e-12 | 5 |
conventional dendritic cell | 3.12e-12 | 8 |
dendritic cell | 3.12e-12 | 10 |
macrophage dendritic cell progenitor | 3.71e-12 | 61 |
classical monocyte | 6.23e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.23e-12 | 42 |
myeloid lineage restricted progenitor cell | 1.35e-11 | 66 |
defensive cell | 4.44e-11 | 48 |
phagocyte | 4.44e-11 | 48 |
myeloid leukocyte | 4.06e-10 | 72 |
monopoietic cell | 4.60e-10 | 59 |
monocyte | 4.60e-10 | 59 |
monoblast | 4.60e-10 | 59 |
promonocyte | 4.60e-10 | 59 |
transitional epithelial cell | 1.00e-09 | 4 |
urothelial cell | 1.00e-09 | 4 |
hematopoietic oligopotent progenitor cell | 6.83e-08 | 161 |
hematopoietic multipotent progenitor cell | 6.83e-08 | 161 |
hematopoietic stem cell | 9.25e-08 | 168 |
hematopoietic cell | 6.44e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
immune system | 2.58e-13 | 93 |
bone marrow | 1.45e-11 | 76 |
hematopoietic system | 3.74e-11 | 98 |
blood island | 3.74e-11 | 98 |
hemolymphoid system | 2.49e-10 | 108 |
bone element | 3.16e-10 | 82 |
skeletal element | 1.17e-09 | 90 |
skeletal system | 5.02e-08 | 100 |
urothelium | 9.64e-08 | 5 |