FFCP PHASE1:Hg19::chr2:135170027..135170035,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C42 | |||
|description=CAGE_peak_at_chr2:135170027..135170035,+ | |||
|id=chr2:135170027..135170035,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002379;3.34e-66;1!CL:0002178;3.66e-23;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002379,2.39e-66,1;CL:0002178,4.09e-23,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1909!1.14e-09!2 | |||
|ontology_enrichment_disease_v019=DOID:3620;3.34e-66;1!DOID:3565;3.34e-66;1!DOID:3493;5.96e-34;2!DOID:5409;7.35e-18;4!DOID:1325;8.16e-11;7!DOID:3904;8.16e-11;7!DOID:3905;1.04e-08;9!DOID:3093;8.14e-07;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,2.39e-66,1;DOID:3565,2.39e-66,1;DOID:3493,7.05e-34,2;DOID:5409,7.35e-18,4;DOID:1325,8.16e-11,7;DOID:3904,8.16e-11,7;DOID:3905,1.04e-08,9;DOID:3093,7.92e-07,11 | |||
|ontology_enrichment_uberon=UBERON:0001049!9.90e-37!57;UBERON:0005068!9.90e-37!57;UBERON:0006241!9.90e-37!57;UBERON:0007135!9.90e-37!57;UBERON:0002616!2.95e-32!59;UBERON:0003075!1.04e-26!86;UBERON:0007284!1.04e-26!86;UBERON:0000955!2.38e-26!69;UBERON:0006238!2.38e-26!69;UBERON:0002780!2.52e-26!41;UBERON:0001890!2.52e-26!41;UBERON:0006240!2.52e-26!41;UBERON:0003080!1.30e-25!42;UBERON:0002346!2.99e-25!90;UBERON:0005743!3.77e-24!86;UBERON:0001017!1.79e-23!82;UBERON:0000073!2.78e-23!94;UBERON:0001016!2.78e-23!94;UBERON:0007023!3.00e-22!115;UBERON:0002020!4.16e-22!34;UBERON:0003528!4.16e-22!34;UBERON:0001893!6.25e-22!34;UBERON:0003056!1.02e-20!61;UBERON:0000033!6.45e-20!123;UBERON:0002791!1.06e-19!33;UBERON:0000153!1.09e-18!129;UBERON:0007811!1.09e-18!129;UBERON:0004121!1.22e-17!169;UBERON:0001869!2.27e-17!32;UBERON:0002298!2.94e-17!8;UBERON:0000924!4.58e-17!173;UBERON:0006601!4.58e-17!173;UBERON:0002308!1.96e-15!9;UBERON:0000125!1.96e-15!9;UBERON:0000025!1.15e-13!194;UBERON:0006331!9.05e-13!3;UBERON:0000988!1.59e-12!3;UBERON:0002619!1.78e-12!22;UBERON:0004111!1.96e-12!241;UBERON:0003076!3.65e-12!15;UBERON:0003057!3.65e-12!15;UBERON:0004733!2.00e-11!12;UBERON:0002028!2.00e-11!12;UBERON:0007277!2.00e-11!12;UBERON:0000477!5.73e-11!286;UBERON:0000956!7.47e-11!25;UBERON:0000203!7.47e-11!25;UBERON:0001950!8.18e-11!20;UBERON:0000200!1.07e-10!6;UBERON:0004732!1.69e-10!13;UBERON:0000483!2.62e-10!309;UBERON:0000119!3.95e-10!312;UBERON:0000475!1.17e-09!365;UBERON:0009663!3.21e-09!7;UBERON:0002148!3.99e-09!2;UBERON:0009662!3.99e-09!2;UBERON:0001872!1.10e-07!5;UBERON:0002680!2.48e-07!9;UBERON:0001895!2.48e-07!9;UBERON:0010092!2.48e-07!9;UBERON:0002420!3.48e-07!9;UBERON:0007245!3.48e-07!9;UBERON:0010009!3.48e-07!9;UBERON:0010011!3.48e-07!9;UBERON:0000454!3.48e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000945;1.71e-14;5!UBERON:0010039;1.71e-14;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000945,1.47e-09,8;UBERON:0010039,1.47e-09,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0.871533458600294,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358042349351218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0.315132729228895,0.494495150286999,0.876246070104404,0.0984274815147488,0,0,0.408610218334727,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0.124192805882767,0,0,0.606596470166591,0.285465333544967,1.6468607378872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.19024743058172,0,0,0,0,0,0,0,0,0.455324382702595,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,1.17780280338292,0,0,0,0,0,0,0,0,5.19551977379216,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:135170027..135170035,+ | |||
}} |
Revision as of 05:31, 21 January 2014
Short description: | p@chr2:135170027..135170035, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:135170027..135170035, + |
Coexpression cluster: | C42_small_lung_maxillary_pharyngeal_Mesenchymal_Wilms_colon |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meningothelial cell | 2.39e-66 | 1 |
epithelial cell of stomach | 4.09e-23 | 3 |
Ontology term | p-value | n |
---|---|---|
stomach | 1.47e-09 | 8 |
food storage organ | 1.47e-09 | 8 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 2.39e-66 | 1 |
meningioma | 2.39e-66 | 1 |
signet ring cell adenocarcinoma | 7.05e-34 | 2 |
lung small cell carcinoma | 7.35e-18 | 4 |
bronchus cancer | 8.16e-11 | 7 |
bronchogenic carcinoma | 8.16e-11 | 7 |
lung carcinoma | 1.04e-08 | 9 |
nervous system cancer | 7.92e-07 | 11 |