FFCP PHASE1:Mm9::chr10:34020647..34020664,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=287|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:34020647..34020664,+|id=chr10:34020647..34020664,+|ontology_enrichment_celltype=CL:0000117!4.20e-30!23;CL:0000337!4.20e-30!23;CL:0000540!1.76e-19!33;CL:0000047!1.76e-19!33;CL:0000031!1.76e-19!33;CL:0000404!1.76e-19!33;CL:0000393!1.69e-17!39;CL:0000211!1.69e-17!39;CL:0002319!8.00e-14!43;CL:0000221!2.12e-13!44;CL:0000133!2.12e-13!44;CL:0000055!1.54e-12!50;CL:0002609!4.65e-08!6;CL:0002321!1.40e-07!70;CL:0000220!1.40e-07!70;CL:0002612!1.51e-07!3;CL:0002614!2.03e-07!3|ontology_enrichment_celltype_v019_2=CL:0000117,4.18e-23,23;CL:0000337,4.18e-23,23;CL:0002610,1.59e-20,3;CL:0002612,1.59e-20,3;CL:0000540,2.90e-16,33;CL:0000047,2.90e-16,33;CL:0000031,2.90e-16,33;CL:0000404,2.90e-16,33;CL:0000393,7.80e-14,39;CL:0000211,7.80e-14,39;CL:0002319,1.38e-12,43;CL:0000221,2.60e-12,44;CL:0000133,2.60e-12,44;CL:0002321,7.20e-08,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.76e-26!52;UBERON:0005068!1.76e-26!52;UBERON:0006241!1.76e-26!52;UBERON:0007135!1.76e-26!52;UBERON:0002020!1.08e-25!34;UBERON:0001017!8.46e-24!73;UBERON:0005743!8.46e-24!73;UBERON:0000073!5.89e-23!75;UBERON:0001016!5.89e-23!75;UBERON:0002616!5.21e-22!49;UBERON:0000955!1.93e-21!50;UBERON:0006238!1.93e-21!50;UBERON:0002346!1.60e-20!71;UBERON:0003075!1.60e-20!71;UBERON:0007284!1.60e-20!71;UBERON:0000033!1.08e-18!63;UBERON:0002791!2.77e-17!29;UBERON:0003528!2.77e-17!29;UBERON:0001893!2.77e-17!29;UBERON:0004121!3.17e-17!102;UBERON:0000924!3.17e-17!102;UBERON:0006601!3.17e-17!102;UBERON:0003080!8.93e-17!40;UBERON:0003056!9.21e-16!49;UBERON:0002780!2.68e-15!39;UBERON:0001890!2.68e-15!39;UBERON:0006240!2.68e-15!39;UBERON:0002298!2.67e-13!6;UBERON:0007811!4.39e-13!86;UBERON:0002420!2.68e-12!8;UBERON:0007245!2.68e-12!8;UBERON:0010009!2.68e-12!8;UBERON:0010011!2.68e-12!8;UBERON:0000454!2.68e-12!8;UBERON:0000153!2.16e-11!94;UBERON:0001948!2.40e-11!5;UBERON:0002315!2.40e-11!5;UBERON:0000025!5.85e-11!114;UBERON:0003076!9.95e-11!12;UBERON:0003057!9.95e-11!12;UBERON:0004111!9.27e-10!122;UBERON:0002950!1.67e-09!4;UBERON:0001891!1.67e-09!4;UBERON:0009616!1.67e-09!4;UBERON:0002240!2.24e-09!6;UBERON:0005174!2.24e-09!6;UBERON:0001137!2.24e-09!6;UBERON:0000956!3.31e-08!21;UBERON:0001869!3.31e-08!21;UBERON:0000203!3.31e-08!21;UBERON:0002257!1.51e-07!3;UBERON:0002038!2.03e-07!3;UBERON:0002308!2.03e-07!3;UBERON:0009663!2.03e-07!3;UBERON:0009661!2.03e-07!3;UBERON:0006331!2.03e-07!3;UBERON:0000125!2.03e-07!3;UBERON:0000477!6.33e-07!154|ontology_enrichment_uberon_v019_2=UBERON:0004684,1.59e-20,3;UBERON:0002257,1.59e-20,3;UBERON:0002275,1.59e-20,3;UBERON:0001948,9.46e-13,5;UBERON:0002315,9.46e-13,5;UBERON:0002240,8.53e-11,6;UBERON:0005174,8.53e-11,6;UBERON:0001137,8.53e-11,6;UBERON:0001017,1.48e-07,73;UBERON:0001016,2.31e-07,75;UBERON:0000073,3.45e-07,54|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,1.05798195854407,0,0,0,0,0,0,0,0,0.414758449233911,0.270011876663381,0.210324961351382,0.571301968807607,0.441737081903227,0.122490799214954,0.191690942036473,0,0,1.14918604276669,2.30409799884365,0.131886287730194,0.731901148819277,0,0.558365998002762,1.12552522006336,0.30559649555362,2.06240009831567,1.42371680799103,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0.898743836428936,0.457500602818626,0.125654352112864,0.347648640384553,0.511430914660661,0.83115217823824,0,0,0,0,0,0,0,0.180062129805349,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0.144649058581512,0,0,0,0,0.481651769963376,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.920650473014354,0.572895513439397,0.859265911718438,0,0,0,0.45032120322422,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0|short_description=p@chr10:34020647..34020664,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=287 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:34020647..34020664,+ | |||
|description=CAGE_peak_at_chr10:34020647..34020664,+ | |||
|id=chr10:34020647..34020664,+ | |||
|ontology_enrichment_celltype=CL:0000117!4.20e-30!23;CL:0000337!4.20e-30!23;CL:0000540!1.76e-19!33;CL:0000047!1.76e-19!33;CL:0000031!1.76e-19!33;CL:0000404!1.76e-19!33;CL:0000393!1.69e-17!39;CL:0000211!1.69e-17!39;CL:0002319!8.00e-14!43;CL:0000221!2.12e-13!44;CL:0000133!2.12e-13!44;CL:0000055!1.54e-12!50;CL:0002609!4.65e-08!6;CL:0002321!1.40e-07!70;CL:0000220!1.40e-07!70;CL:0002612!1.51e-07!3;CL:0002614!2.03e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.18e-23,23;CL:0000337,4.18e-23,23;CL:0002610,1.59e-20,3;CL:0002612,1.59e-20,3;CL:0000540,2.90e-16,33;CL:0000047,2.90e-16,33;CL:0000031,2.90e-16,33;CL:0000404,2.90e-16,33;CL:0000393,7.80e-14,39;CL:0000211,7.80e-14,39;CL:0002319,1.38e-12,43;CL:0000221,2.60e-12,44;CL:0000133,2.60e-12,44;CL:0002321,7.20e-08,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.76e-26!52;UBERON:0005068!1.76e-26!52;UBERON:0006241!1.76e-26!52;UBERON:0007135!1.76e-26!52;UBERON:0002020!1.08e-25!34;UBERON:0001017!8.46e-24!73;UBERON:0005743!8.46e-24!73;UBERON:0000073!5.89e-23!75;UBERON:0001016!5.89e-23!75;UBERON:0002616!5.21e-22!49;UBERON:0000955!1.93e-21!50;UBERON:0006238!1.93e-21!50;UBERON:0002346!1.60e-20!71;UBERON:0003075!1.60e-20!71;UBERON:0007284!1.60e-20!71;UBERON:0000033!1.08e-18!63;UBERON:0002791!2.77e-17!29;UBERON:0003528!2.77e-17!29;UBERON:0001893!2.77e-17!29;UBERON:0004121!3.17e-17!102;UBERON:0000924!3.17e-17!102;UBERON:0006601!3.17e-17!102;UBERON:0003080!8.93e-17!40;UBERON:0003056!9.21e-16!49;UBERON:0002780!2.68e-15!39;UBERON:0001890!2.68e-15!39;UBERON:0006240!2.68e-15!39;UBERON:0002298!2.67e-13!6;UBERON:0007811!4.39e-13!86;UBERON:0002420!2.68e-12!8;UBERON:0007245!2.68e-12!8;UBERON:0010009!2.68e-12!8;UBERON:0010011!2.68e-12!8;UBERON:0000454!2.68e-12!8;UBERON:0000153!2.16e-11!94;UBERON:0001948!2.40e-11!5;UBERON:0002315!2.40e-11!5;UBERON:0000025!5.85e-11!114;UBERON:0003076!9.95e-11!12;UBERON:0003057!9.95e-11!12;UBERON:0004111!9.27e-10!122;UBERON:0002950!1.67e-09!4;UBERON:0001891!1.67e-09!4;UBERON:0009616!1.67e-09!4;UBERON:0002240!2.24e-09!6;UBERON:0005174!2.24e-09!6;UBERON:0001137!2.24e-09!6;UBERON:0000956!3.31e-08!21;UBERON:0001869!3.31e-08!21;UBERON:0000203!3.31e-08!21;UBERON:0002257!1.51e-07!3;UBERON:0002038!2.03e-07!3;UBERON:0002308!2.03e-07!3;UBERON:0009663!2.03e-07!3;UBERON:0009661!2.03e-07!3;UBERON:0006331!2.03e-07!3;UBERON:0000125!2.03e-07!3;UBERON:0000477!6.33e-07!154 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,1.59e-20,3;UBERON:0002257,1.59e-20,3;UBERON:0002275,1.59e-20,3;UBERON:0001948,9.46e-13,5;UBERON:0002315,9.46e-13,5;UBERON:0002240,8.53e-11,6;UBERON:0005174,8.53e-11,6;UBERON:0001137,8.53e-11,6;UBERON:0001017,1.48e-07,73;UBERON:0001016,2.31e-07,75;UBERON:0000073,3.45e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,1.05798195854407,0,0,0,0,0,0,0,0,0.414758449233911,0.270011876663381,0.210324961351382,0.571301968807607,0.441737081903227,0.122490799214954,0.191690942036473,0,0,1.14918604276669,2.30409799884365,0.131886287730194,0.731901148819277,0,0.558365998002762,1.12552522006336,0.30559649555362,2.06240009831567,1.42371680799103,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0.898743836428936,0.457500602818626,0.125654352112864,0.347648640384553,0.511430914660661,0.83115217823824,0,0,0,0,0,0,0,0.180062129805349,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0.144649058581512,0,0,0,0,0.481651769963376,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.920650473014354,0.572895513439397,0.859265911718438,0,0,0,0.45032120322422,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:34020647..34020664,+ | |||
}} |
Latest revision as of 08:06, 4 August 2015
Short description: | p@chr10:34020647..34020664, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:34020647..34020664, + |
Coexpression cluster: | MCL_coexpression_mm9:287 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.18e-23 | 23 |
neuroblast (sensu Vertebrata) | 4.18e-23 | 23 |
raphe nuclei neuron | 1.59e-20 | 3 |
neuron of the ventral spinal cord | 1.59e-20 | 3 |
neuron | 2.90e-16 | 33 |
neuronal stem cell | 2.90e-16 | 33 |
neuroblast | 2.90e-16 | 33 |
electrically signaling cell | 2.90e-16 | 33 |
electrically responsive cell | 7.80e-14 | 39 |
electrically active cell | 7.80e-14 | 39 |
neural cell | 1.38e-12 | 43 |
ectodermal cell | 2.60e-12 | 44 |
neurectodermal cell | 2.60e-12 | 44 |
embryonic cell | 7.20e-08 | 70 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 1.59e-20 | 3 |
ventral horn of spinal cord | 1.59e-20 | 3 |
reticular formation | 1.59e-20 | 3 |
regional part of spinal cord | 9.46e-13 | 5 |
gray matter of spinal cord | 9.46e-13 | 5 |
spinal cord | 8.53e-11 | 6 |
dorsal region element | 8.53e-11 | 6 |
dorsum | 8.53e-11 | 6 |
central nervous system | 1.48e-07 | 73 |
nervous system | 2.31e-07 | 75 |
regional part of nervous system | 3.45e-07 | 54 |