FFCP PHASE1:Hg19::chr2:29353520..29353557,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79745 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26108 | |||
|TSSclassifier=strong | |||
|UniProt=C9IYE4 | |||
|association_with_transcript=0bp_to_ENST00000438819,ENST00000530644,uc010ymn.1_5end | |||
|description=CAGE_peak_8_at_CLIP4_5end | |||
|id=chr2:29353520..29353557,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.97e-11!254;CL:0000076!3.41e-07!62;CL:0000077!3.68e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:0000082;1.63e-12;19!CL:0002553;3.76e-11;1!CL:0000319;6.76e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000082,1.61e-12,19;CL:0002553,3.76e-11,1;CL:0000319,5.57e-11,1;CL:0000066,4.14e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0001041;1.32e-19;30!UBERON:0007123;1.82e-08;5!UBERON:0008947;3.78e-08;29!UBERON:0009497;2.43e-07;13 | |||
|ontology_enrichment_disease=DOID:305!3.89e-23!106;DOID:0050687!3.98e-17!143;DOID:162!3.38e-14!235;DOID:14566!1.60e-13!239;DOID:0050615!1.99e-09!16;DOID:1749!1.95e-08!14;DOID:1324!3.80e-08!15 | |||
|ontology_enrichment_disease_v019=DOID:0050615;5.23e-21;16!DOID:1324;7.10e-16;15!DOID:5662;3.40e-11;1!DOID:3030;6.76e-11;1!DOID:6193;6.76e-11;1!DOID:0050619;1.27e-10;1!DOID:1357;1.27e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050615,5.23e-21,16;DOID:1324,6.99e-16,15;DOID:305,3.09e-13,106;DOID:0050687,1.10e-12,143;DOID:162,9.42e-12,235;DOID:14566,1.90e-11,239;DOID:5662,3.41e-11,1;DOID:3030,5.57e-11,1;DOID:6193,8.22e-11,1;DOID:0050619,1.33e-10,1;DOID:1357,1.33e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0001007!7.24e-07!155;UBERON:0001555!7.24e-07!155;UBERON:0007026!7.24e-07!155;UBERON:0005911!8.59e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0004802;1.63e-12;19!UBERON:0000115;1.63e-12;19!UBERON:0002048;8.62e-11;22!UBERON:0004807;8.62e-11;22!UBERON:0000117;8.62e-11;22!UBERON:0000171;8.62e-11;22!UBERON:0000170;8.62e-11;22!UBERON:0001764;1.27e-10;1!UBERON:0001825;1.27e-10;1!UBERON:0002046;1.82e-08;5!UBERON:0005178;4.25e-07;34!UBERON:0002224;4.25e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004802,1.61e-12,19;UBERON:0000115,1.61e-12,19;UBERON:0002048,8.54e-11,22;UBERON:0000117,8.54e-11,22;UBERON:0000171,8.54e-11,22;UBERON:0000170,8.54e-11,22;UBERON:0005597,8.54e-11,22;UBERON:0000118,8.54e-11,22;UBERON:0001764,1.33e-10,1;UBERON:0001825,1.33e-10,1;UBERON:0005911,3.08e-10,82;UBERON:0002046,1.72e-08,5;UBERON:0004117,1.72e-08,5;UBERON:0007689,1.72e-08,5;UBERON:0007123,1.72e-08,5;UBERON:0003091,1.72e-08,5;UBERON:0004807,1.89e-08,28;UBERON:0005178,6.29e-07,34;UBERON:0002224,6.29e-07,34 | |||
|phase1_expression=0.363356758541113,0,0,0,0,0,0,0,0,0,0,0,0,0.37129905888014,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0.853015394924529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0.306083892370903,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0.649094787309367,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0.241011029883482,0.330881918197182,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201057944823262,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0.207970861530807,0,0.157702415033935,0.117141414992713,0.300946099727719,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0.241718899183244,0.200506470303285,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290033387828457,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306806047506464,0,0,0,14.3216939740487,0,0.295930216910801,0,0,0,0,0,0,0,0,0.682760689712998,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0.32681539055697,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0.424059214301822,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0.063186579628488,0,0,0,0.330991955875499,0,0,3.41531455235751,0,0.173559738335131,0.0979923974143777,0.69647365264322,0.17472666824203,2.0638323896594,1.35458863804719,1.60796497589608,0.492692742319255,0.0969890164884194,0,0,0,0,0,0.391102765469606,0.64127056201227,0,0,0,0,0,0.14405479798815,0.99402028452346,0.235694034616795,0,0,1.01998217636322,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.13395422361945,0.169346664131569,0,0,0.160753148465019,0,0,0,0,0,0,0.0788057072991982,0.314727528809989,0,1.07572403599707,0.191915197319445,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0.684347351537318,1.40963004463334,0,0,0,0,0,0,0,0,0,0,0,1.09937867375164,0,0,0,0,0,0.124192805882767,0.138348634936231,0,0,0,0.235265819698172,0,0,0.149254802886874,0.233713309847224,0,0,0.251567901752575,0,0,0.151230923763239,0.15543720058278,0.147855149989634,0,0,0,0,0,0,0.150257608997218,0,0.406870733204662,0,0.107410557042488,0.464033759878494,0,0,0,0,0,0.192619830407303,0.214441591374926,1.04397716786085,0.906823702049089,0,0,0,0.617602894321944,0,0,0.192914038270915,0.337884881306145,2.30617366729152,2.41801239211839,0,0,0,0,0,0,2.94927490504463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.20513673456923,0,0,0,0,0,0,0,0,0,0,0.981477185010256,15.5720034819017,0.366857197043358,0,0,0,0,0.0752103283492573,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0,0,9.60332852849544,0,0,0.118193840883968,0,0.235479278551542,0,0,0,0.431855182437243,0,0.142953088353313,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0.31020638566432,0,0.223710863595585,0,0.365753774946808,0,0,0,0,0,0,0,3.61427462524672,0,0,0,0,0,0.490296643507811,0,0,0,0,0,0,0,0,0.178553938605658,0,20.0603416722921,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0,0.714193294391221,0.129177819672012,0.0620747142958579,0,2.22765053973577,1.41482032270754,0,0,0.0673520530145875,0.0717222053926763,0,0,0.320182037633146,0,0,0,0,0,0.665756774185513,0,0 | |||
|short_description=p8@CLIP4 | |||
}} |
Revision as of 02:24, 21 January 2014
Short description: | p8@CLIP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_CLIP4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000438819, ENST00000530644, uc010ymn.1_5end |
EntrezGene: | CLIP4 |
HGNC: | 26108 |
UniProt: | C9IYE4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of lung | 1.61e-12 | 19 |
lung fibroblast | 3.76e-11 | 1 |
mucus secreting cell | 5.57e-11 | 1 |
epithelial cell | 4.14e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
respiratory tract epithelium | 1.61e-12 | 19 |
lung epithelium | 1.61e-12 | 19 |
lung | 8.54e-11 | 22 |
respiratory tube | 8.54e-11 | 22 |
respiration organ | 8.54e-11 | 22 |
pair of lungs | 8.54e-11 | 22 |
lung primordium | 8.54e-11 | 22 |
lung bud | 8.54e-11 | 22 |
maxillary sinus | 1.33e-10 | 1 |
paranasal sinus | 1.33e-10 | 1 |
endo-epithelium | 3.08e-10 | 82 |
thyroid gland | 1.72e-08 | 5 |
pharyngeal pouch | 1.72e-08 | 5 |
thyroid diverticulum | 1.72e-08 | 5 |
pharyngeal pouch 2 | 1.72e-08 | 5 |
thyroid primordium | 1.72e-08 | 5 |
respiratory system epithelium | 1.89e-08 | 28 |
thoracic cavity element | 6.29e-07 | 34 |
thoracic cavity | 6.29e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
respiratory system cancer | 5.23e-21 | 16 |
lung cancer | 6.99e-16 | 15 |
carcinoma | 3.09e-13 | 106 |
cell type cancer | 1.10e-12 | 143 |
cancer | 9.42e-12 | 235 |
disease of cellular proliferation | 1.90e-11 | 239 |
pleomorphic carcinoma | 3.41e-11 | 1 |
mucinous adenocarcinoma | 5.57e-11 | 1 |
epithelioid sarcoma | 8.22e-11 | 1 |
paranasal sinus cancer | 1.33e-10 | 1 |
maxillary sinus cancer | 1.33e-10 | 1 |