FFCP PHASE1:Mm9::chr11:46009553..46009569,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=145|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:46009553..46009569,-|id=chr11:46009553..46009569,-|ontology_enrichment_celltype=CL:0000117!4.47e-08!23;CL:0000337!4.47e-08!23|ontology_enrichment_celltype_v019_2=CL:0002610,9.82e-14,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!3.48e-16!52;UBERON:0005068!3.48e-16!52;UBERON:0006241!3.48e-16!52;UBERON:0007135!3.48e-16!52;UBERON:0000955!1.54e-15!50;UBERON:0006238!1.54e-15!50;UBERON:0007811!1.61e-15!86;UBERON:0002020!2.27e-15!34;UBERON:0000033!7.54e-15!63;UBERON:0002616!8.46e-15!49;UBERON:0002346!8.98e-15!71;UBERON:0003075!8.98e-15!71;UBERON:0007284!8.98e-15!71;UBERON:0001017!1.11e-14!73;UBERON:0005743!1.11e-14!73;UBERON:0000073!2.27e-14!75;UBERON:0001016!2.27e-14!75;UBERON:0000153!2.71e-13!94;UBERON:0004121!1.63e-12!102;UBERON:0000924!1.63e-12!102;UBERON:0006601!1.63e-12!102;UBERON:0002791!3.20e-12!29;UBERON:0003528!3.20e-12!29;UBERON:0001893!3.20e-12!29;UBERON:0003080!1.10e-11!40;UBERON:0003056!1.90e-11!49;UBERON:0002780!4.89e-11!39;UBERON:0001890!4.89e-11!39;UBERON:0006240!4.89e-11!39;UBERON:0002021!6.71e-10!10;UBERON:0000411!6.71e-10!10;UBERON:0001950!6.71e-10!10;UBERON:0000956!8.86e-09!21;UBERON:0001869!8.86e-09!21;UBERON:0000203!8.86e-09!21;UBERON:0002619!4.57e-08!17;UBERON:0000064!1.68e-07!99;UBERON:0000475!3.28e-07!200|ontology_enrichment_uberon_v019_2=UBERON:0002021,9.88e-34,10;UBERON:0000411,9.88e-34,10;UBERON:0001950,9.88e-34,10;UBERON:0002619,2.48e-19,17;UBERON:0002020,4.18e-19,34;UBERON:0000956,7.54e-19,21;UBERON:0001869,7.54e-19,21;UBERON:0000203,7.54e-19,21;UBERON:0000073,9.45e-18,54;UBERON:0003528,4.58e-16,29;UBERON:0002791,4.58e-16,29;UBERON:0001893,4.58e-16,29;UBERON:0001017,3.24e-14,73;UBERON:0001016,9.22e-14,75;UBERON:0004684,9.82e-14,3;UBERON:0002275,9.82e-14,3;UBERON:0001049,9.76e-12,52;UBERON:0005068,9.76e-12,52;UBERON:0006241,9.76e-12,52;UBERON:0007135,9.76e-12,52;UBERON:0002780,1.72e-11,39;UBERON:0001890,1.72e-11,39;UBERON:0006240,1.72e-11,39;UBERON:0003080,3.69e-11,40;UBERON:0000955,4.61e-11,47;UBERON:0006238,4.61e-11,47;UBERON:0004121,2.91e-10,95;UBERON:0000924,2.91e-10,95;UBERON:0006601,2.91e-10,95;UBERON:0002616,1.80e-09,46;UBERON:0002346,4.03e-09,64;UBERON:0003075,4.03e-09,64;UBERON:0007284,4.03e-09,64;UBERON:0003056,8.81e-09,49;UBERON:0010371,1.01e-07,73|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0.262261207256992,0,0,0,0.157731082679119,0.411343300817216,0,0,0.695036658406197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09265815368454,0.7813353445238,1.0470474879476,0.588231488031014,0.683045484958446,0.971020706062307,0,0,0,0,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,0.606949382578793,0.528990979272033,0,0,0,0,0,0.7104801149461,0,0,0.518448061542388,0,0.210324961351382,0.571301968807607,1.32521124570968,0,0.287536413054709,0,1.10115880999389,2.68143409978894,2.76491759861238,0.527545150920775,0.274462930807229,0,0.837548997004143,0.56276261003168,1.37518422999129,2.65165726926301,0.996601765593721,0.186399445825301,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0.517875767294343,0.148442139064825,0.173485326766136,0,0,0.150722640552623,0.23517741427141,0.251333182659351,0,0,0,0,0,0,0,0.585561594023094,0.83778682725382,0,0.11981512450592,0,0,0.898743836428936,0.915001205637253,0.628271760564322,1.04294592115366,1.27857728665165,0.83115217823824,0.486723789203273,0,0.622034853050465,0,0,0,0.229902104433473,0,0.452114453507145,0.136072998302656,0.2562274405697,0,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0.568326998791185,0,0,0,0,0.196764231747404,0.462801338662135,0,0,0,0,0.32833492815819,0.0810688095458557,0.146199987425332,0,0.268412837520744,0.210289948564127,0.617427674275707,0.330418782983798,0,0.213288250535234,0,0.128867461322093,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0.407302655690628,0,0,0.0632365371242573,0.738050739898011,0.627994911365499,0.370191491765402,0,0,0,0,0,0,0,0,0,0,2.87536413054709,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0,0.160550589987792,0.703270119553219,0,0,0,0,0,0,0.222798674082394,0,0,0,0,1.28528526568723,0,0,0,0.164970122972535,0,0.242780636154981,0,0,0,0,0.258428293168221,0,0,0.632073515871632,0,0,0,0,0,0.214337035031592,0.177340233642274,0,0,0.304464949114599,0,0.21183207086382,0,0,0,0.0603129249281559,0,0,0,0.741701208042039,0,0,0.185194527369712,0.188368457004691,0.27338845544205,0.228778173206523,0.169978429993855,0.559805809294632,0.414599921413271,0,0,0,0,0,0,0.269728692769641,0,0,0,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0.202725215290164,0.308132871494482,0.25984164595559,0.179026695667481,0,0.360586348559907,0.443068581523732,0.504832249740738,0.685861259894999,0.201652370273681,0.877120926657772,0.0962118416403295,0.233753804363138,0,0,0,0,0,0.187682475451182,0,0,0,2.25900737046827,1.38097570952153,1.14579102687879,4.29632955859219,0.685082519770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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=145 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:46009553..46009569,- | |||
|description=CAGE_peak_at_chr11:46009553..46009569,- | |||
|id=chr11:46009553..46009569,- | |||
|ontology_enrichment_celltype=CL:0000117!4.47e-08!23;CL:0000337!4.47e-08!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,9.82e-14,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.48e-16!52;UBERON:0005068!3.48e-16!52;UBERON:0006241!3.48e-16!52;UBERON:0007135!3.48e-16!52;UBERON:0000955!1.54e-15!50;UBERON:0006238!1.54e-15!50;UBERON:0007811!1.61e-15!86;UBERON:0002020!2.27e-15!34;UBERON:0000033!7.54e-15!63;UBERON:0002616!8.46e-15!49;UBERON:0002346!8.98e-15!71;UBERON:0003075!8.98e-15!71;UBERON:0007284!8.98e-15!71;UBERON:0001017!1.11e-14!73;UBERON:0005743!1.11e-14!73;UBERON:0000073!2.27e-14!75;UBERON:0001016!2.27e-14!75;UBERON:0000153!2.71e-13!94;UBERON:0004121!1.63e-12!102;UBERON:0000924!1.63e-12!102;UBERON:0006601!1.63e-12!102;UBERON:0002791!3.20e-12!29;UBERON:0003528!3.20e-12!29;UBERON:0001893!3.20e-12!29;UBERON:0003080!1.10e-11!40;UBERON:0003056!1.90e-11!49;UBERON:0002780!4.89e-11!39;UBERON:0001890!4.89e-11!39;UBERON:0006240!4.89e-11!39;UBERON:0002021!6.71e-10!10;UBERON:0000411!6.71e-10!10;UBERON:0001950!6.71e-10!10;UBERON:0000956!8.86e-09!21;UBERON:0001869!8.86e-09!21;UBERON:0000203!8.86e-09!21;UBERON:0002619!4.57e-08!17;UBERON:0000064!1.68e-07!99;UBERON:0000475!3.28e-07!200 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,9.88e-34,10;UBERON:0000411,9.88e-34,10;UBERON:0001950,9.88e-34,10;UBERON:0002619,2.48e-19,17;UBERON:0002020,4.18e-19,34;UBERON:0000956,7.54e-19,21;UBERON:0001869,7.54e-19,21;UBERON:0000203,7.54e-19,21;UBERON:0000073,9.45e-18,54;UBERON:0003528,4.58e-16,29;UBERON:0002791,4.58e-16,29;UBERON:0001893,4.58e-16,29;UBERON:0001017,3.24e-14,73;UBERON:0001016,9.22e-14,75;UBERON:0004684,9.82e-14,3;UBERON:0002275,9.82e-14,3;UBERON:0001049,9.76e-12,52;UBERON:0005068,9.76e-12,52;UBERON:0006241,9.76e-12,52;UBERON:0007135,9.76e-12,52;UBERON:0002780,1.72e-11,39;UBERON:0001890,1.72e-11,39;UBERON:0006240,1.72e-11,39;UBERON:0003080,3.69e-11,40;UBERON:0000955,4.61e-11,47;UBERON:0006238,4.61e-11,47;UBERON:0004121,2.91e-10,95;UBERON:0000924,2.91e-10,95;UBERON:0006601,2.91e-10,95;UBERON:0002616,1.80e-09,46;UBERON:0002346,4.03e-09,64;UBERON:0003075,4.03e-09,64;UBERON:0007284,4.03e-09,64;UBERON:0003056,8.81e-09,49;UBERON:0010371,1.01e-07,73 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0.262261207256992,0,0,0,0.157731082679119,0.411343300817216,0,0,0.695036658406197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09265815368454,0.7813353445238,1.0470474879476,0.588231488031014,0.683045484958446,0.971020706062307,0,0,0,0,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,0.606949382578793,0.528990979272033,0,0,0,0,0,0.7104801149461,0,0,0.518448061542388,0,0.210324961351382,0.571301968807607,1.32521124570968,0,0.287536413054709,0,1.10115880999389,2.68143409978894,2.76491759861238,0.527545150920775,0.274462930807229,0,0.837548997004143,0.56276261003168,1.37518422999129,2.65165726926301,0.996601765593721,0.186399445825301,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0.517875767294343,0.148442139064825,0.173485326766136,0,0,0.150722640552623,0.23517741427141,0.251333182659351,0,0,0,0,0,0,0,0.585561594023094,0.83778682725382,0,0.11981512450592,0,0,0.898743836428936,0.915001205637253,0.628271760564322,1.04294592115366,1.27857728665165,0.83115217823824,0.486723789203273,0,0.622034853050465,0,0,0,0.229902104433473,0,0.452114453507145,0.136072998302656,0.2562274405697,0,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0.568326998791185,0,0,0,0,0.196764231747404,0.462801338662135,0,0,0,0,0.32833492815819,0.0810688095458557,0.146199987425332,0,0.268412837520744,0.210289948564127,0.617427674275707,0.330418782983798,0,0.213288250535234,0,0.128867461322093,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0.407302655690628,0,0,0.0632365371242573,0.738050739898011,0.627994911365499,0.370191491765402,0,0,0,0,0,0,0,0,0,0,2.87536413054709,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0,0.160550589987792,0.703270119553219,0,0,0,0,0,0,0.222798674082394,0,0,0,0,1.28528526568723,0,0,0,0.164970122972535,0,0.242780636154981,0,0,0,0,0.258428293168221,0,0,0.632073515871632,0,0,0,0,0,0.214337035031592,0.177340233642274,0,0,0.304464949114599,0,0.21183207086382,0,0,0,0.0603129249281559,0,0,0,0.741701208042039,0,0,0.185194527369712,0.188368457004691,0.27338845544205,0.228778173206523,0.169978429993855,0.559805809294632,0.414599921413271,0,0,0,0,0,0,0.269728692769641,0,0,0,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0.202725215290164,0.308132871494482,0.25984164595559,0.179026695667481,0,0.360586348559907,0.443068581523732,0.504832249740738,0.685861259894999,0.201652370273681,0.877120926657772,0.0962118416403295,0.233753804363138,0,0,0,0,0,0.187682475451182,0,0,0,2.25900737046827,1.38097570952153,1.14579102687879,4.29632955859219,0.685082519770642,1.5107877947794,1.35004500046361,2.2516060161211,1.81256963593682,2.07104124700728,0.103787347584177,0,0,0,0,0.183843508450014,0,0,0.320919209591815,0,0,0.188626341386076,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0,0,0,0,0,0.177475806159338,0.238436189947321,0,0.0941093804153306,0.0846146078916765,0,0,0,0,0,0.29551344712669,0,0,0,0.499621155875892,0,0,0,0,0.231867835620421 | |||
|short_description=p@chr11:46009553..46009569,- | |||
}} |
Latest revision as of 22:44, 5 August 2015
Short description: | p@chr11:46009553..46009569, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:46009553..46009569, - |
Coexpression cluster: | MCL_coexpression_mm9:145 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 9.82e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 9.88e-34 | 10 |
visual cortex | 9.88e-34 | 10 |
neocortex | 9.88e-34 | 10 |
regional part of cerebral cortex | 2.48e-19 | 17 |
gray matter | 4.18e-19 | 34 |
cerebral cortex | 7.54e-19 | 21 |
cerebral hemisphere | 7.54e-19 | 21 |
pallium | 7.54e-19 | 21 |
regional part of nervous system | 9.45e-18 | 54 |
brain grey matter | 4.58e-16 | 29 |
regional part of telencephalon | 4.58e-16 | 29 |
telencephalon | 4.58e-16 | 29 |
central nervous system | 3.24e-14 | 73 |
nervous system | 9.22e-14 | 75 |
raphe nuclei | 9.82e-14 | 3 |
reticular formation | 9.82e-14 | 3 |
neural tube | 9.76e-12 | 52 |
neural rod | 9.76e-12 | 52 |
future spinal cord | 9.76e-12 | 52 |
neural keel | 9.76e-12 | 52 |
regional part of forebrain | 1.72e-11 | 39 |
forebrain | 1.72e-11 | 39 |
future forebrain | 1.72e-11 | 39 |
anterior neural tube | 3.69e-11 | 40 |
brain | 4.61e-11 | 47 |
future brain | 4.61e-11 | 47 |
ectoderm-derived structure | 2.91e-10 | 95 |
ectoderm | 2.91e-10 | 95 |
presumptive ectoderm | 2.91e-10 | 95 |
regional part of brain | 1.80e-09 | 46 |
neurectoderm | 4.03e-09 | 64 |
neural plate | 4.03e-09 | 64 |
presumptive neural plate | 4.03e-09 | 64 |
pre-chordal neural plate | 8.81e-09 | 49 |
ecto-epithelium | 1.01e-07 | 73 |