FFCP PHASE1:Mm9::chr11:55422124..55422129,-: Difference between revisions
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{{FFCP|EntrezGene=14654|HGNC=|MCL_coexpression_id=218|UniProt=Q64018|association_with_transcript=-424bp_to_ENSMUST00000102716_5end|description=CAGE_peak_9_at_Glra1_5end|id=chr11:55422124..55422129,-|ontology_enrichment_celltype=CL:0000117!1.06e-13!23;CL:0000337!1.06e-13!23;CL:0002611!6.94e-11!2;CL:0000540!2.85e-09!33;CL:0000047!2.85e-09!33;CL:0000031!2.85e-09!33;CL:0000404!2.85e-09!33;CL:0002610!3.63e-08!3;CL:0002612!5.43e-08!3;CL:0002614!5.43e-08!3;CL:0000393!1.06e-07!39;CL:0000211!1.06e-07!39;CL:0002319!6.78e-07!43|ontology_enrichment_celltype_v019_2=CL:0002610,6.06e-20,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002298!2.03e-22!6;UBERON:0002240!1.01e-21!6;UBERON:0005174!1.01e-21!6;UBERON:0001137!1.01e-21!6;UBERON:0003076!4.35e-21!12;UBERON:0003057!4.35e-21!12;UBERON:0001948!1.15e-16!5;UBERON:0002315!1.15e-16!5;UBERON:0001049!2.92e-15!52;UBERON:0005068!2.92e-15!52;UBERON:0006241!2.92e-15!52;UBERON:0007135!2.92e-15!52;UBERON:0001017!2.86e-14!73;UBERON:0005743!2.86e-14!73;UBERON:0000073!7.80e-14!75;UBERON:0001016!7.80e-14!75;UBERON:0002346!1.44e-12!71;UBERON:0003075!1.44e-12!71;UBERON:0007284!1.44e-12!71;UBERON:0002950!1.63e-12!4;UBERON:0001891!1.63e-12!4;UBERON:0009616!1.63e-12!4;UBERON:0001896!4.35e-12!2;UBERON:0005290!4.35e-12!2;UBERON:0010096!4.35e-12!2;UBERON:0004121!3.59e-11!102;UBERON:0000924!3.59e-11!102;UBERON:0006601!3.59e-11!102;UBERON:0002256!6.94e-11!2;UBERON:0002616!1.85e-09!49;UBERON:0000955!3.05e-09!50;UBERON:0006238!3.05e-09!50;UBERON:0000033!1.28e-08!63;UBERON:0004684!3.63e-08!3;UBERON:0002275!3.63e-08!3;UBERON:0002038!5.43e-08!3;UBERON:0002308!5.43e-08!3;UBERON:0009663!5.43e-08!3;UBERON:0009661!5.43e-08!3;UBERON:0006331!5.43e-08!3;UBERON:0000125!5.43e-08!3;UBERON:0002257!5.43e-08!3|ontology_enrichment_uberon_v019_2=UBERON:0001896,4.77e-30,2;UBERON:0002298,4.77e-30,2;UBERON:0005290,4.77e-30,2;UBERON:0010096,4.77e-30,2;UBERON:0004684,6.06e-20,3;UBERON:0002275,6.06e-20,3;UBERON:0003076,8.73e-12,12;UBERON:0003057,8.73e-12,12;UBERON:0004733,9.54e-11,6;UBERON:0004732,9.54e-11,6;UBERON:0002028,9.54e-11,6;UBERON:0007277,9.54e-11,6;UBERON:0001017,1.48e-07,73;UBERON:0001016,2.31e-07,75;UBERON:0000073,4.03e-07,54|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,1.14918604276669,1.22885226604995,0,0,0,1.67509799400829,0,0.30559649555362,0.589257170947335,0.711858403995515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599162557619291,0,0,0,0,0.41557608911912,0.162241263067758,0,0,0,0.420883711772948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60550589987792,2.10981035865966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.96680483216816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p9@Glra1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:14654 | |||
|HGNC= | |||
|MCL_coexpression_id=218 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q64018 | |||
|association_with_transcript=-424bp_to_ENSMUST00000102716_5end | |||
|cluster_id=chr11:55422124..55422129,- | |||
|description=CAGE_peak_9_at_Glra1_5end | |||
|id=chr11:55422124..55422129,- | |||
|ontology_enrichment_celltype=CL:0000117!1.06e-13!23;CL:0000337!1.06e-13!23;CL:0002611!6.94e-11!2;CL:0000540!2.85e-09!33;CL:0000047!2.85e-09!33;CL:0000031!2.85e-09!33;CL:0000404!2.85e-09!33;CL:0002610!3.63e-08!3;CL:0002612!5.43e-08!3;CL:0002614!5.43e-08!3;CL:0000393!1.06e-07!39;CL:0000211!1.06e-07!39;CL:0002319!6.78e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,6.06e-20,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002298!2.03e-22!6;UBERON:0002240!1.01e-21!6;UBERON:0005174!1.01e-21!6;UBERON:0001137!1.01e-21!6;UBERON:0003076!4.35e-21!12;UBERON:0003057!4.35e-21!12;UBERON:0001948!1.15e-16!5;UBERON:0002315!1.15e-16!5;UBERON:0001049!2.92e-15!52;UBERON:0005068!2.92e-15!52;UBERON:0006241!2.92e-15!52;UBERON:0007135!2.92e-15!52;UBERON:0001017!2.86e-14!73;UBERON:0005743!2.86e-14!73;UBERON:0000073!7.80e-14!75;UBERON:0001016!7.80e-14!75;UBERON:0002346!1.44e-12!71;UBERON:0003075!1.44e-12!71;UBERON:0007284!1.44e-12!71;UBERON:0002950!1.63e-12!4;UBERON:0001891!1.63e-12!4;UBERON:0009616!1.63e-12!4;UBERON:0001896!4.35e-12!2;UBERON:0005290!4.35e-12!2;UBERON:0010096!4.35e-12!2;UBERON:0004121!3.59e-11!102;UBERON:0000924!3.59e-11!102;UBERON:0006601!3.59e-11!102;UBERON:0002256!6.94e-11!2;UBERON:0002616!1.85e-09!49;UBERON:0000955!3.05e-09!50;UBERON:0006238!3.05e-09!50;UBERON:0000033!1.28e-08!63;UBERON:0004684!3.63e-08!3;UBERON:0002275!3.63e-08!3;UBERON:0002038!5.43e-08!3;UBERON:0002308!5.43e-08!3;UBERON:0009663!5.43e-08!3;UBERON:0009661!5.43e-08!3;UBERON:0006331!5.43e-08!3;UBERON:0000125!5.43e-08!3;UBERON:0002257!5.43e-08!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,4.77e-30,2;UBERON:0002298,4.77e-30,2;UBERON:0005290,4.77e-30,2;UBERON:0010096,4.77e-30,2;UBERON:0004684,6.06e-20,3;UBERON:0002275,6.06e-20,3;UBERON:0003076,8.73e-12,12;UBERON:0003057,8.73e-12,12;UBERON:0004733,9.54e-11,6;UBERON:0004732,9.54e-11,6;UBERON:0002028,9.54e-11,6;UBERON:0007277,9.54e-11,6;UBERON:0001017,1.48e-07,73;UBERON:0001016,2.31e-07,75;UBERON:0000073,4.03e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,1.14918604276669,1.22885226604995,0,0,0,1.67509799400829,0,0.30559649555362,0.589257170947335,0.711858403995515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599162557619291,0,0,0,0,0.41557608911912,0.162241263067758,0,0,0,0.420883711772948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60550589987792,2.10981035865966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.96680483216816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p9@Glra1 | |||
}} |
Revision as of 03:16, 6 August 2015
Short description: | p9@Glra1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Glra1_5end |
Coexpression cluster: | MCL_coexpression_mm9:218 |
Association with transcript: | -424bp_to_ENSMUST00000102716_5end |
EntrezGene: | 14654 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 6.06e-20 | 3 |
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 4.77e-30 | 2 |
brainstem | 4.77e-30 | 2 |
myelencephalon | 4.77e-30 | 2 |
future myelencephalon | 4.77e-30 | 2 |
raphe nuclei | 6.06e-20 | 3 |
reticular formation | 6.06e-20 | 3 |
posterior neural tube | 8.73e-12 | 12 |
chordal neural plate | 8.73e-12 | 12 |
segmental subdivision of hindbrain | 9.54e-11 | 6 |
segmental subdivision of nervous system | 9.54e-11 | 6 |
hindbrain | 9.54e-11 | 6 |
presumptive hindbrain | 9.54e-11 | 6 |
central nervous system | 1.48e-07 | 73 |
nervous system | 2.31e-07 | 75 |
regional part of nervous system | 4.03e-07 | 54 |