FFCP PHASE1:Hg19::chr2:87018470..87018477,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=925 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1706 | |||
|TSSclassifier=weak | |||
|UniProt=P01732 | |||
|association_with_transcript=325bp_to_ENST00000283635_5end | |||
|coexpression_cluster_id=C1077 | |||
|description=CAGE_peak_7_at_CD8A_5end | |||
|id=chr2:87018470..87018477,- | |||
|ontology_enrichment_celltype=CL:0000625!4.17e-24!11;CL:0000623!8.83e-23!3;CL:0000825!8.83e-23!3;CL:0002087!1.09e-14!119;CL:0000791!1.47e-14!18;CL:0000789!1.47e-14!18;CL:0002420!1.47e-14!18;CL:0002419!1.47e-14!18;CL:0000790!1.47e-14!18;CL:0000084!5.34e-14!25;CL:0000827!5.34e-14!25;CL:0000738!1.08e-13!140;CL:0000838!9.57e-13!52;CL:0000542!1.79e-12!53;CL:0000051!1.79e-12!53;CL:0000842!1.26e-10!3;CL:0002031!1.34e-10!124;CL:0000037!1.57e-10!172;CL:0000566!1.57e-10!172;CL:0000988!9.07e-10!182;CL:0002032!1.79e-08!165;CL:0000837!1.79e-08!165;CL:0000224!3.46e-08!4 | |||
|ontology_enrichment_celltype_v019=CL:0000625;6.20e-25;11!CL:0000791;9.75e-16;18!CL:0000789;9.75e-16;18!CL:0002419;9.75e-16;18!CL:0000084;1.15e-11;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,6.20e-25,11;CL:0000791,9.75e-16,18;CL:0000789,9.75e-16,18;CL:0002420,9.75e-16,18;CL:0002419,9.75e-16,18;CL:0000790,9.75e-16,18;CL:0000084,1.15e-11,25;CL:0000827,1.15e-11,25 | |||
|ontology_enrichment_development_v019=CL:0000790;9.75e-16;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.58e-17!7;UBERON:0002106!8.06e-11!3;UBERON:0004854!8.06e-11!3;UBERON:0009034!8.06e-11!3;UBERON:0002095!8.06e-11!3;UBERON:0004782!8.06e-11!3;UBERON:0003281!8.06e-11!3;UBERON:0009664!8.06e-11!3;UBERON:0002296!8.06e-11!3;UBERON:0005602!8.06e-11!3;UBERON:0001179!8.06e-11!3;UBERON:0006293!8.06e-11!3;UBERON:0002193!3.03e-10!112;UBERON:0000029!7.75e-09!1;UBERON:0002370!1.05e-08!4;UBERON:0005058!1.05e-08!4;UBERON:0009113!1.05e-08!4;UBERON:0003295!1.05e-08!4;UBERON:0005562!1.05e-08!4;UBERON:0002372!1.78e-08!1;UBERON:0001961!1.78e-08!1;UBERON:0001744!1.78e-08!1;UBERON:0001735!1.78e-08!1;UBERON:0002390!3.01e-08!102;UBERON:0003061!3.01e-08!102;UBERON:0000974!2.17e-07!10;UBERON:0001042!2.47e-07!10;UBERON:0009145!2.47e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;3.61e-34;2!UBERON:0005058;3.61e-34;2!UBERON:0009113;3.61e-34;2!UBERON:0004177;1.40e-14;5!UBERON:0005057;1.40e-14;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,7.35e-18,4;UBERON:0005058,7.35e-18,4;UBERON:0009113,7.35e-18,4;UBERON:0003295,7.35e-18,4;UBERON:0005562,7.35e-18,4;UBERON:0003351,2.19e-12,6;UBERON:0004177,8.16e-11,7;UBERON:0005057,8.16e-11,7;UBERON:0000974,5.73e-08,10;UBERON:0003408,5.73e-08,10;UBERON:0001042,5.73e-08,10;UBERON:0009145,5.73e-08,10;UBERON:0006562,2.32e-07,11;UBERON:0009722,2.32e-07,11;UBERON:0007690,2.32e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0.434021741431704,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0.689491361473237,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0.821127996921047,1.00803371612366,1.33720097891754,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0.862510299438069,0.128343036279748,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0.995985806877798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.939839179798536,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,2.45437857376823,0.744896571550295,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p7@CD8A | |||
}} |
Revision as of 04:19, 21 January 2014
Short description: | p7@CD8A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_CD8A_5end |
Coexpression cluster: | C1077_thymus_CD8_Natural_blood_NK_Peripheral_acute |
Association with transcript: | 325bp_to_ENST00000283635_5end |
EntrezGene: | CD8A |
HGNC: | 1706 |
UniProt: | P01732 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 6.20e-25 | 11 |
mature alpha-beta T cell | 9.75e-16 | 18 |
alpha-beta T cell | 9.75e-16 | 18 |
immature T cell | 9.75e-16 | 18 |
mature T cell | 9.75e-16 | 18 |
immature alpha-beta T cell | 9.75e-16 | 18 |
T cell | 1.15e-11 | 25 |
pro-T cell | 1.15e-11 | 25 |
Ontology term | p-value | n |
---|---|---|
thymus | 7.35e-18 | 4 |
hemolymphoid system gland | 7.35e-18 | 4 |
thymic region | 7.35e-18 | 4 |
pharyngeal gland | 7.35e-18 | 4 |
thymus primordium | 7.35e-18 | 4 |
pharyngeal epithelium | 2.19e-12 | 6 |
hemopoietic organ | 8.16e-11 | 7 |
immune organ | 8.16e-11 | 7 |
neck | 5.73e-08 | 10 |
gland of gut | 5.73e-08 | 10 |
chordate pharynx | 5.73e-08 | 10 |
pharyngeal region of foregut | 5.73e-08 | 10 |
pharynx | 2.32e-07 | 11 |
entire pharyngeal arch endoderm | 2.32e-07 | 11 |
early pharyngeal endoderm | 2.32e-07 | 11 |