FFCP PHASE1:Mm9::chr11:59355080..59355093,+: Difference between revisions
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{{FFCP|EntrezGene=216799|HGNC=|MCL_coexpression_id=6|UniProt=Q8R4B8|association_with_transcript=0bp_to_uc007jeh.1_5end|description=CAGE_peak_1_at_Nlrp3_5end|id=chr11:59355080..59355093,+|ontology_enrichment_celltype=CL:0000049!1.23e-08!19;CL:0000988!2.63e-07!32;CL:0002032!2.63e-07!32;CL:0000037!2.63e-07!32;CL:0000566!2.63e-07!32;CL:0000837!2.63e-07!32|ontology_enrichment_celltype_v019_2=CL:0000049,1.06e-14,19;CL:0000557,1.94e-13,7;CL:0002476,3.24e-08,2;CL:0000988,3.69e-08,32;CL:0002032,3.69e-08,32;CL:0000037,3.69e-08,32;CL:0000837,3.69e-08,32;CL:0000763,6.70e-08,16;CL:0000034,4.92e-07,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,1.37e-12,3;DOID:4045,1.37e-12,3|ontology_enrichment_uberon=UBERON:0001474!3.90e-09!22;UBERON:0004765!3.90e-09!22;UBERON:0001434!3.90e-09!22;UBERON:0002371!5.94e-09!16;UBERON:0002204!3.92e-08!32|ontology_enrichment_uberon_v019_2=UBERON:0002204,2.45e-12,32;UBERON:0002371,1.52e-10,16;UBERON:0001474,1.25e-09,22;UBERON:0004765,1.25e-09,22;UBERON:0001434,1.25e-09,22|phase1_expression=0.640595388419176,0,0,0,0,0,0,0.129123323441576,0.140788722151667,0,0,0,0,0,0.999329285446988,0.404950534779652,0,0.473193248037357,1.09691546884591,0,0.0850432901510698,0,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.9489611056883,12.5013655123808,15.1821885752402,359.997670674981,111.336414048227,60.203283775863,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0.672187598284928,0,0,0,0,0,0,0,0,0,0.988866362566974,1.4209602298922,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0,0,0,0,0,0,0,0,0,1.76922110389975,0,0.220841518460394,0,0,0,0,0,4.91242010474273,17.9970819298022,5.20987930999565,0.149790639404823,0,0,0.173824320192276,0,0,0.324482526135515,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.7464769335779,14.1541348913093,7.10408748488982,0,0.234526059981096,0,0.23674473558521,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0.474529061544512,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0.156998727841375,0.246794327843601,0.592905254174298,0,0.196558995113203,0,0.202860121388503,0.241177159752417,0,0.287696137450811,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0.167506257441816,0,0.195133647857799,0,0.44292937929755,0.318909537314974,0.983179888294428,0,0.433947175744535,3.01582567878545,2.71952841909355,0,0,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.329940245945071,0,0,0,0.377210159511796,0,0,0,0,0,0,0,1.03135543248187,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0.18542530201051,0.341741761595705,0,1.11116716421827,0.188368457004691,0.136694227721025,0,3.73952545986482,8.39708713941948,2.76399947608848,0,0,0,0,0,0,0,0,0.26175594198403,0.259229946583586,1.24267862617385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0.375364950902364,0.183151624267265,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0.222246727801615,0,0,0.252697211763798,0.25347929989024,0,0.0936415074698824,0,0,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0,1.12228454331548,0,0,0,0,0,0,0,0.214871054048298,0.191288332068843,0,0|short_description=p1@Nlrp3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:216799 | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8R4B8 | |||
|association_with_transcript=0bp_to_uc007jeh.1_5end | |||
|cluster_id=chr11:59355080..59355093,+ | |||
|description=CAGE_peak_1_at_Nlrp3_5end | |||
|id=chr11:59355080..59355093,+ | |||
|ontology_enrichment_celltype=CL:0000049!1.23e-08!19;CL:0000988!2.63e-07!32;CL:0002032!2.63e-07!32;CL:0000037!2.63e-07!32;CL:0000566!2.63e-07!32;CL:0000837!2.63e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,1.06e-14,19;CL:0000557,1.94e-13,7;CL:0002476,3.24e-08,2;CL:0000988,3.69e-08,32;CL:0002032,3.69e-08,32;CL:0000037,3.69e-08,32;CL:0000837,3.69e-08,32;CL:0000763,6.70e-08,16;CL:0000034,4.92e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.37e-12,3;DOID:4045,1.37e-12,3 | |||
|ontology_enrichment_uberon=UBERON:0001474!3.90e-09!22;UBERON:0004765!3.90e-09!22;UBERON:0001434!3.90e-09!22;UBERON:0002371!5.94e-09!16;UBERON:0002204!3.92e-08!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,2.45e-12,32;UBERON:0002371,1.52e-10,16;UBERON:0001474,1.25e-09,22;UBERON:0004765,1.25e-09,22;UBERON:0001434,1.25e-09,22 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0.129123323441576,0.140788722151667,0,0,0,0,0,0.999329285446988,0.404950534779652,0,0.473193248037357,1.09691546884591,0,0.0850432901510698,0,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.9489611056883,12.5013655123808,15.1821885752402,359.997670674981,111.336414048227,60.203283775863,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0.672187598284928,0,0,0,0,0,0,0,0,0,0.988866362566974,1.4209602298922,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0,0,0,0,0,0,0,0,0,1.76922110389975,0,0.220841518460394,0,0,0,0,0,4.91242010474273,17.9970819298022,5.20987930999565,0.149790639404823,0,0,0.173824320192276,0,0,0.324482526135515,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.7464769335779,14.1541348913093,7.10408748488982,0,0.234526059981096,0,0.23674473558521,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0.474529061544512,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0.156998727841375,0.246794327843601,0.592905254174298,0,0.196558995113203,0,0.202860121388503,0.241177159752417,0,0.287696137450811,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0.167506257441816,0,0.195133647857799,0,0.44292937929755,0.318909537314974,0.983179888294428,0,0.433947175744535,3.01582567878545,2.71952841909355,0,0,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.329940245945071,0,0,0,0.377210159511796,0,0,0,0,0,0,0,1.03135543248187,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0.18542530201051,0.341741761595705,0,1.11116716421827,0.188368457004691,0.136694227721025,0,3.73952545986482,8.39708713941948,2.76399947608848,0,0,0,0,0,0,0,0,0.26175594198403,0.259229946583586,1.24267862617385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0.375364950902364,0.183151624267265,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0.222246727801615,0,0,0.252697211763798,0.25347929989024,0,0.0936415074698824,0,0,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0,1.12228454331548,0,0,0,0,0,0,0,0.214871054048298,0.191288332068843,0,0 | |||
|short_description=p1@Nlrp3 | |||
}} |
Revision as of 04:51, 6 August 2015
Short description: | p1@Nlrp3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Nlrp3_5end |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | 0bp_to_uc007jeh.1_5end |
EntrezGene: | 216799 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 1.06e-14 | 19 |
granulocyte monocyte progenitor cell | 1.94e-13 | 7 |
bone marrow macrophage | 3.24e-08 | 2 |
hematopoietic cell | 3.69e-08 | 32 |
hematopoietic oligopotent progenitor cell | 3.69e-08 | 32 |
hematopoietic stem cell | 3.69e-08 | 32 |
hematopoietic multipotent progenitor cell | 3.69e-08 | 32 |
myeloid cell | 6.70e-08 | 16 |
stem cell | 4.92e-07 | 97 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 2.45e-12 | 32 |
bone marrow | 1.52e-10 | 16 |
bone element | 1.25e-09 | 22 |
skeletal element | 1.25e-09 | 22 |
skeletal system | 1.25e-09 | 22 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.37e-12 | 3 |
muscle cancer | 1.37e-12 | 3 |