FFCP PHASE1:Hg19::chr3:112218304..112218325,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=151888 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21087 | |||
|TSSclassifier=strong | |||
|UniProt=Q7Z6A9 | |||
|association_with_transcript=82bp_to_ENST00000334529,NM_001085357,NM_181780,uc003dza.3,uc003dzb.3_5end | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_1_at_BTLA_5end | |||
|id=chr3:112218304..112218325,- | |||
|ontology_enrichment_celltype=CL:0000542!4.40e-42!53;CL:0000051!4.40e-42!53;CL:0000838!6.81e-41!52;CL:0000738!2.22e-31!140;CL:0002087!2.09e-30!119;CL:0000037!4.47e-25!172;CL:0000566!4.47e-25!172;CL:0002031!1.68e-24!124;CL:0000988!3.12e-23!182;CL:0000945!1.41e-22!24;CL:0000826!1.41e-22!24;CL:0002032!6.19e-21!165;CL:0000837!6.19e-21!165;CL:0000791!1.55e-20!18;CL:0000789!1.55e-20!18;CL:0002420!1.55e-20!18;CL:0002419!1.55e-20!18;CL:0000790!1.55e-20!18;CL:0000236!1.88e-18!14;CL:0000084!1.65e-16!25;CL:0000827!1.65e-16!25;CL:0000625!4.25e-15!11;CL:0000624!1.31e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0000542;2.30e-32;53!CL:0000945;9.47e-32;24!CL:0000791;8.11e-30;18!CL:0000789;8.11e-30;18!CL:0002419;8.11e-30;18!CL:0000236;7.41e-28;13!CL:0000084;7.14e-23;25!CL:0000625;3.09e-20;11!CL:0000624;3.06e-13;6!CL:0002087;9.70e-10;104!CL:0000784;3.50e-08;3!CL:0000898;2.34e-07;3!CL:0000226;2.83e-07;3!CL:0000842;2.83e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,9.22e-58,53;CL:0000051,9.22e-58,53;CL:0000838,7.51e-56,52;CL:0000945,8.44e-32,24;CL:0000826,8.44e-32,24;CL:0000236,4.74e-30,14;CL:0000791,5.99e-30,18;CL:0000789,5.99e-30,18;CL:0002420,5.99e-30,18;CL:0002419,5.99e-30,18;CL:0000790,5.99e-30,18;CL:0002087,7.50e-29,115;CL:0000738,9.97e-27,136;CL:0000084,6.69e-23,25;CL:0000827,6.69e-23,25;CL:0002031,1.55e-21,120;CL:0000037,2.24e-21,168;CL:0000625,2.48e-20,11;CL:0000988,1.24e-19,177;CL:0002032,4.18e-17,161;CL:0000837,4.18e-17,161;CL:0000624,2.77e-13,6;CL:0000784,3.22e-08,3;CL:0000898,1.86e-07,3;CL:0000226,2.39e-07,3;CL:0000842,2.39e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000051;2.30e-32;53!CL:0000790;8.11e-30;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.14e-14!15;UBERON:0000179!1.14e-14!15;UBERON:0000463!1.14e-14!15;UBERON:0002390!2.58e-09!102;UBERON:0003061!2.58e-09!102;UBERON:0002193!5.22e-09!112;UBERON:0007023!1.16e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.56e-21;15!UBERON:0000179;4.56e-21;15!UBERON:0000463;4.56e-21;15!UBERON:0002390;2.68e-18;32!UBERON:0002193;7.44e-13;42!UBERON:0004177;6.89e-08;5!UBERON:0005057;6.89e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.72e-21,15;UBERON:0000179,3.72e-21,15;UBERON:0000463,3.72e-21,15;UBERON:0004177,2.17e-08,7;UBERON:0005057,2.17e-08,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.5419546956456,18.8010349840376,22.826126580967,0,0.767658796194425,0.309632246632152,0,0.30120591877825,0,0.619737604642413,0.142169232487422,0.587200878669695,0,0.601633342410425,0.651032612147555,0.447830948479849,0.971680998056939,0,0.145398238779565,0,0,0.232429036905685,0.411167888021826,0,0.28769239232215,0.256160706529101,0,0,1.29096936716765,0,0,0,0,0,1.28371610830437,0,0,0.398927315243264,0.426224750532694,0,0,0.622822248995575,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0,80.9582724522084,73.1825739091256,80.9453421015835,75.5312493942718,85.6847412257067,68.3955403545835,64.1213526601316,71.5540315901523,36.4296300230047,24.0767247642085,25.6123062843903,1.32171328579026,0,1.84368859342554,4.52432471261816,3.14408610199332,3.28962398399215,1.33749196312542,2.60737813306872,2.36723902867367,0,0.891283655081389,1.76763544484902,3.32300841875432,0.812411591295047,1.0247305578054,0.390178042679635,3.4531959966772,0.829050053357545,8.11448640058147,8.45233410023744,9.09638815505025,8.36284190439814,6.79856056185397,6.51474839123266,3.4362744548263,6.32549230048757,10.5126586726952,7.1619179924206,6.65316431113862,9.18508226374414,12.9266477265963,3.74792179657038,8.05042656949657,9.03240796613151,0.80642697289893,1.87208137048455,1.30341963494519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.96226560763355,9.15191857248205,9.65789503456869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37921532141349,0.431255149719035,1.15508732651774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.9624326269493,2.37285620900479,1.60091336705167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,14.2085330585007,11.4695581071356,6.83576624608995,16.4379925065874,13.5749550118444,7.13320642311989,10.2605973075242,8.72437693923697,0,0,0,3.34445715226294,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,1.4098700508785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.7750727057148,0,0,4.80030741298171,0,0,0,0,0.887790650732402,2.3948309234694,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0.796118080530053,1.22206028986725,0,0.123563938946503,0,0.067401132980677,0.802577647298789,0,1.64209310294099,0,0,0,2.41981432097328,0.30607276163049,0.252746318513952,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.969890164884194,0,0.225980740780532,0,0,0,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0,0,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0.472834243795189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.961086713109252,0.471612915298998,0.828478110694391,12.9003165671107,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,7.02927324090253,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.926089897295336,0.874238242015829,0,0.245148321753905,0,0,0.297046400327086,0,0,7.14277776646887,5.15663103788617,0,0,0,0,0,2.2936464170227,0,0,0,0,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,1.0661699095049,0,5.10252387704448,4.34523000071005,0,0.0636471582781649,0.202117188958219,0.653150243690884,0,5.45551629418159,0.717222053926764,0,0,0,0,0,0,0.122241444182866,0,0,8.65477312441413,15.3872876305552 | |||
|short_description=p1@BTLA | |||
}} |
Revision as of 20:30, 21 January 2014
Short description: | p1@BTLA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BTLA_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | 82bp_to_ENST00000334529, NM_001085357, NM_181780, uc003dza.3, uc003dzb.3_5end |
EntrezGene: | BTLA |
HGNC: | 21087 |
UniProt: | Q7Z6A9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 9.22e-58 | 53 |
common lymphoid progenitor | 9.22e-58 | 53 |
lymphoid lineage restricted progenitor cell | 7.51e-56 | 52 |
lymphocyte of B lineage | 8.44e-32 | 24 |
pro-B cell | 8.44e-32 | 24 |
B cell | 4.74e-30 | 14 |
mature alpha-beta T cell | 5.99e-30 | 18 |
alpha-beta T cell | 5.99e-30 | 18 |
immature T cell | 5.99e-30 | 18 |
mature T cell | 5.99e-30 | 18 |
immature alpha-beta T cell | 5.99e-30 | 18 |
nongranular leukocyte | 7.50e-29 | 115 |
leukocyte | 9.97e-27 | 136 |
T cell | 6.69e-23 | 25 |
pro-T cell | 6.69e-23 | 25 |
hematopoietic lineage restricted progenitor cell | 1.55e-21 | 120 |
hematopoietic stem cell | 2.24e-21 | 168 |
CD8-positive, alpha-beta T cell | 2.48e-20 | 11 |
hematopoietic cell | 1.24e-19 | 177 |
hematopoietic oligopotent progenitor cell | 4.18e-17 | 161 |
hematopoietic multipotent progenitor cell | 4.18e-17 | 161 |
CD4-positive, alpha-beta T cell | 2.77e-13 | 6 |
plasmacytoid dendritic cell | 3.22e-08 | 3 |
naive T cell | 1.86e-07 | 3 |
single nucleate cell | 2.39e-07 | 3 |
mononuclear cell | 2.39e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 3.72e-21 | 15 |
haemolymphatic fluid | 3.72e-21 | 15 |
organism substance | 3.72e-21 | 15 |
hemopoietic organ | 2.17e-08 | 7 |
immune organ | 2.17e-08 | 7 |