FFCP PHASE1:Hg19::chr3:195163834..195163851,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23527 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16469 | |||
|TSSclassifier=strong | |||
|UniProt=Q15057 | |||
|association_with_transcript=-17bp_to_NM_012287,uc003fun.3,uc003fuo.2_5end | |||
|coexpression_cluster_id=C3488 | |||
|description=CAGE_peak_6_at_ACAP2_5end | |||
|id=chr3:195163834..195163851,- | |||
|ontology_enrichment_celltype=CL:0000542!1.05e-16!53;CL:0000051!1.05e-16!53;CL:0000838!1.17e-16!52;CL:0000037!2.55e-15!172;CL:0000566!2.55e-15!172;CL:0000738!5.70e-14!140;CL:0000988!2.23e-13!182;CL:0002032!1.08e-12!165;CL:0000837!1.08e-12!165;CL:0000791!3.19e-12!18;CL:0000789!3.19e-12!18;CL:0002420!3.19e-12!18;CL:0002419!3.19e-12!18;CL:0000790!3.19e-12!18;CL:0002087!2.71e-11!119;CL:0000084!3.73e-11!25;CL:0000827!3.73e-11!25;CL:0002031!2.42e-10!124;CL:0000625!1.82e-08!11;CL:0000236!5.56e-08!14 | |||
|ontology_enrichment_celltype_v019=CL:0000791;5.94e-29;18!CL:0000789;5.94e-29;18!CL:0002419;5.94e-29;18!CL:0000084;2.46e-24;25!CL:0000625;9.26e-20;11!CL:0000542;1.19e-19;53!CL:0000236;6.88e-18;13!CL:0000624;7.22e-13;6!CL:0000945;2.66e-08;24!CL:0000898;3.00e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.46e-33,52;CL:0000542,1.02e-32,53;CL:0000051,1.02e-32,53;CL:0000791,3.95e-29,18;CL:0000789,3.95e-29,18;CL:0002420,3.95e-29,18;CL:0002419,3.95e-29,18;CL:0000790,3.95e-29,18;CL:0000084,1.95e-24,25;CL:0000827,1.95e-24,25;CL:0000625,6.81e-20,11;CL:0000738,7.22e-20,136;CL:0002087,1.07e-17,115;CL:0000037,1.19e-17,168;CL:0000236,1.60e-16,14;CL:0000988,5.44e-16,177;CL:0002031,2.17e-13,120;CL:0000624,6.38e-13,6;CL:0002032,7.32e-13,161;CL:0000837,7.32e-13,161;CL:0000945,2.25e-08,24;CL:0000826,2.25e-08,24;CL:0000898,2.85e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;5.94e-29;18!CL:0000051;1.19e-19;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.02e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.02e-15;15!UBERON:0000179;1.02e-15;15!UBERON:0000463;1.02e-15;15!UBERON:0002390;2.92e-13;32!UBERON:0002193;5.77e-09;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,7.72e-16,15;UBERON:0000179,7.72e-16,15;UBERON:0000463,7.72e-16,15 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0.626909442956176,0.286235987131057,0.273748850145768,0.502170558379211,0.534893840235659,0.246301768349837,0.236132343941038,0.393364276848904,0.767658796194425,0.154816123316076,0,0,0.369754010166788,0.542270404062111,0,1.17440175733939,1.10799081706375,0.601633342410425,1.30206522429511,0.447830948479849,1.6194683300949,1.54545340580512,0.145398238779565,0,0.242584061187816,0,0.411167888021826,0.619412741790207,0,0.512321413058201,0,0.344745680736619,0,0,0,0.272906150057846,0.224723484445085,0,0.320929027076094,0.639337125799041,0,0.797854630486527,0.426224750532694,0,0,0,0.502497330513487,0.521482918420201,0.217188844705117,0,0.736555271975129,0,0.633765858935825,0.212604299965044,0,0,0.600707571366025,0.48217676009124,0.285012743741249,0.39783335439818,0.365328307529268,3.51992488922645,2.73069305631066,3.55803701545422,2.13365111283254,1.20118796110804,4.59801951963587,3.96626923670917,2.86216126360609,2.84606484554724,3.52342313622563,1.52909291250092,1.32171328579026,1.68152568894461,0.263384084775077,9.24535919535015,5.50215067848831,5.96244347098577,5.3499678525017,5.86660079940463,5.20792586308207,1.94826728407911,4.01077644786625,5.59751224202191,3.1014745241707,2.16643091012012,1.15282187753108,1.95089021339817,0.657751618414705,0.276350017785848,0.289803085735052,5.6348894001583,8.02622484269139,2.09071047609954,1.35971211237079,6.13152789763074,4.12352934579156,2.27717722817553,6.37130828648194,4.55758417699493,4.75226022224187,3.01150238155546,3.07167866770604,4.99722906209383,2.60454977248419,4.10563998460523,3.83052812126992,1.60464117470104,2.75166367377318,0,0,0.12786256184353,0.361439152384566,0.50133791063589,0.144846518960824,0,0,0.189069634328136,0.221729397462564,0,1.11332214173056,0,0,0.324547393654683,1.0447784237956,0.26591592103773,5.24679373471752,1.14398982156026,3.71457501329565,0,0,0,0,0,0.550236083880135,0.208994966536811,0,0,0.33472061276467,0.402829317109147,0,0.24406205754817,0.367663080345869,0.81014194788176,0.0892997282840798,0.22452937262617,0.112611480483322,0,0,0,1.31780417436063,3.87780264148325,0,0,0.12663051166458,0.132409180813219,0.286836620748814,0,0,0,0,0.311211035399766,0.134710672069688,0.163461903113459,0,0.576175924479999,0.234321431833797,0,0,0,0.939475989150119,0.323745888736263,0.280901613404497,0,0,0.309977343527296,0,0,0,0,0.336672227908132,0,0,0,0,0.150238058906597,0,0.538168907066586,0,0,0,0,0.257640540045629,0.558350568994769,0,0.194874010322397,0,0.0920498986422993,0.161646056818812,0.355009592516614,0,0,0,0,0.286804595389004,0,0,0.232387885739037,0.207322110030741,0.252320850875628,0,0,0,0,0.464367928031979,0,0.118306800039844,0,0,0.220587945464788,0.435758888184812,0,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0.122988438543114,0,0.109750285408626,0,0.703702806881416,0.277765335475589,0,0,0,0.231860809950154,0.117408694235822,0,0.462985512576611,0,0,0,0.246217006087397,0.234004265139238,0.148631162288728,0,0.503946384596579,0.141775097242386,0.447792613514241,0,0,0.985326475791887,0.088048434013226,0.621984346622316,0.432359860250884,0.12624243342638,0.190493682876507,0.763976851116555,0,0,0.205654985406647,0,0,0.112131084345361,0,0.2933531432838,0.129271715757778,0,0,0.797814349754612,0,0,0,0.266422179016099,0.142977993658148,0,0,0.65147236858747,0,0,0,0,0.099972991182057,0,0,0,0.479249710983165,0,0,0,0,0.358121926479791,0.224170287987055,2.56139988262505,1.94064817373566,2.95188983443421,0,1.30139853857622,0.773288812777695,0.670065061337395,0.637938751653163,2.24702107184155,0,2.90090859405225,0.613457458595699,0,0,0.207970861530807,0,0,0,0.601892199455438,0,0,0,0,0.0868836144680828,0.195801157462741,0,6.20304078368662,1.94142780736755,3.09509917629989,0,0,0,0.496215615637554,0,0,0,0,0,0,0.154209693802656,0,0.246381468041427,0,0,0.483437798366489,0,0.460404944679482,0,0,0,0,0.231046011313244,0,0,0.633309773357254,0,0.170093705276516,0,0,0,0,0.254876273045038,0,0,0.219259876645935,0.261435451024901,0.769350375349168,0,0.325378394664303,0.103041011647722,0.183138929636687,0.165018999841176,0,0,0,0.290012154876366,0.154048617114644,0.15350367472613,0,0.322260734604821,0.290033387828457,0.170453254832202,0.0890320356467374,0.165284915360978,0.192190067365106,0.382838137483752,0.809262246844399,0,0.31481234683064,0.6970372701606,0,0.532306030317022,0,0.18532421910392,0,0,0.316379424718726,0,0.255897791311334,0,0.318203247925937,0,0.359744915166629,0,0.235624804691373,0,0,0,0,0,0,0.136499911407986,0.565621727814851,0,0,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0.384888450902048,0,0,0.0941438007767792,0,0,0,0,3.04468565539302,2.29391162142713,3.41788312304498,2.38231775457789,4.11362273086194,3.8908398671563,1.62009431171434,3.17250070517708,0.106824071127473,0,0,0.371606350251437,1.15415370381156,0.782560276832555,2.71024663638998,0.199579371432817,0,1.05836791361941,1.29848776109822,0.561594356226918,0.456469358066384,0.4700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| |||
|short_description=p6@ACAP2 | |||
}} |
Revision as of 23:28, 21 January 2014
Short description: | p6@ACAP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ACAP2_5end |
Coexpression cluster: | C3488_thymus_CD4_giant_Peripheral_CD8_CD19_Dendritic |
Association with transcript: | -17bp_to_NM_012287, uc003fun.3, uc003fuo.2_5end |
EntrezGene: | ACAP2 |
HGNC: | 16469 |
UniProt: | Q15057 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.46e-33 | 52 |
lymphocyte | 1.02e-32 | 53 |
common lymphoid progenitor | 1.02e-32 | 53 |
mature alpha-beta T cell | 3.95e-29 | 18 |
alpha-beta T cell | 3.95e-29 | 18 |
immature T cell | 3.95e-29 | 18 |
mature T cell | 3.95e-29 | 18 |
immature alpha-beta T cell | 3.95e-29 | 18 |
T cell | 1.95e-24 | 25 |
pro-T cell | 1.95e-24 | 25 |
CD8-positive, alpha-beta T cell | 6.81e-20 | 11 |
leukocyte | 7.22e-20 | 136 |
nongranular leukocyte | 1.07e-17 | 115 |
hematopoietic stem cell | 1.19e-17 | 168 |
B cell | 1.60e-16 | 14 |
hematopoietic cell | 5.44e-16 | 177 |
hematopoietic lineage restricted progenitor cell | 2.17e-13 | 120 |
CD4-positive, alpha-beta T cell | 6.38e-13 | 6 |
hematopoietic oligopotent progenitor cell | 7.32e-13 | 161 |
hematopoietic multipotent progenitor cell | 7.32e-13 | 161 |
lymphocyte of B lineage | 2.25e-08 | 24 |
pro-B cell | 2.25e-08 | 24 |
naive T cell | 2.85e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 7.72e-16 | 15 |
haemolymphatic fluid | 7.72e-16 | 15 |
organism substance | 7.72e-16 | 15 |