FFCP PHASE1:Mm9::chr13:12199124..12199135,-: Difference between revisions
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{{FFCP|EntrezGene=20191|HGNC=|MCL_coexpression_id=405|UniProt=E9Q401,Q80ZZ5,Q60835,Q9ERN6|association_with_transcript=76bp_to_ENSMUST00000021750,ENSMUST00000170156,NM_023868,uc007pld.1,uc007plf.1,uc011ywc.1_5end|description=CAGE_peak_3_at_Ryr2_5end|id=chr13:12199124..12199135,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!7.22e-15!71;UBERON:0003075!7.22e-15!71;UBERON:0007284!7.22e-15!71;UBERON:0001017!2.10e-14!73;UBERON:0005743!2.10e-14!73;UBERON:0000025!3.45e-14!114;UBERON:0001049!8.09e-14!52;UBERON:0005068!8.09e-14!52;UBERON:0006241!8.09e-14!52;UBERON:0007135!8.09e-14!52;UBERON:0000073!1.79e-13!75;UBERON:0001016!1.79e-13!75;UBERON:0004111!3.11e-13!122;UBERON:0004121!9.88e-13!102;UBERON:0000924!9.88e-13!102;UBERON:0006601!9.88e-13!102;UBERON:0007100!3.46e-12!18;UBERON:0000948!3.46e-12!18;UBERON:0005498!3.46e-12!18;UBERON:0004140!3.46e-12!18;UBERON:0009881!3.46e-12!18;UBERON:0004141!3.46e-12!18;UBERON:0003084!3.46e-12!18;UBERON:0007005!3.46e-12!18;UBERON:0004139!3.46e-12!18;UBERON:0004291!3.46e-12!18;UBERON:0002020!5.29e-12!34;UBERON:0000955!8.04e-12!50;UBERON:0006238!8.04e-12!50;UBERON:0002616!2.99e-11!49;UBERON:0000033!5.61e-10!63;UBERON:0003080!1.44e-09!40;UBERON:0002791!2.26e-09!29;UBERON:0003528!2.26e-09!29;UBERON:0001893!2.26e-09!29;UBERON:0002780!5.06e-09!39;UBERON:0001890!5.06e-09!39;UBERON:0006240!5.06e-09!39;UBERON:0002021!8.41e-09!10;UBERON:0000411!8.41e-09!10;UBERON:0001950!8.41e-09!10;UBERON:0004535!1.60e-08!23;UBERON:0001009!1.60e-08!23;UBERON:0003056!2.99e-08!49;UBERON:0000483!4.80e-08!181;UBERON:0000477!1.17e-07!154;UBERON:0000119!1.19e-07!183;UBERON:0000956!9.25e-07!21;UBERON:0001869!9.25e-07!21;UBERON:0000203!9.25e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0010314,6.12e-32,92;UBERON:0000025,7.64e-24,114;UBERON:0000073,1.75e-23,54;UBERON:0007100,2.87e-23,18;UBERON:0000948,2.87e-23,18;UBERON:0005498,2.87e-23,18;UBERON:0004140,2.87e-23,18;UBERON:0009881,2.87e-23,18;UBERON:0004141,2.87e-23,18;UBERON:0003084,2.87e-23,18;UBERON:0007005,2.87e-23,18;UBERON:0004139,2.87e-23,18;UBERON:0004291,2.87e-23,18;UBERON:0001049,8.33e-23,52;UBERON:0005068,8.33e-23,52;UBERON:0006241,8.33e-23,52;UBERON:0007135,8.33e-23,52;UBERON:0004111,1.28e-21,122;UBERON:0001017,2.40e-19,73;UBERON:0002020,4.40e-19,34;UBERON:0002021,9.66e-19,10;UBERON:0000411,9.66e-19,10;UBERON:0001950,9.66e-19,10;UBERON:0001016,1.30e-18,75;UBERON:0000955,1.77e-17,47;UBERON:0006238,1.77e-17,47;UBERON:0004535,2.59e-17,23;UBERON:0001009,2.59e-17,23;UBERON:0002346,3.76e-17,64;UBERON:0003075,3.76e-17,64;UBERON:0007284,3.76e-17,64;UBERON:0002616,2.67e-16,46;UBERON:0003103,6.94e-15,43;UBERON:0010371,3.83e-14,73;UBERON:0003528,1.80e-13,29;UBERON:0002791,1.80e-13,29;UBERON:0001893,1.80e-13,29;UBERON:0004121,5.32e-13,95;UBERON:0000924,5.32e-13,95;UBERON:0006601,5.32e-13,95;UBERON:0003080,1.03e-12,40;UBERON:0002619,2.58e-12,17;UBERON:0003076,3.53e-12,12;UBERON:0003057,3.53e-12,12;UBERON:0000483,3.92e-12,174;UBERON:0000119,7.03e-12,176;UBERON:0002780,1.19e-11,39;UBERON:0001890,1.19e-11,39;UBERON:0006240,1.19e-11,39;UBERON:0000956,2.24e-11,21;UBERON:0001869,2.24e-11,21;UBERON:0000203,2.24e-11,21;UBERON:0004872,7.37e-11,33;UBERON:0003056,1.65e-09,49;UBERON:0002240,5.45e-09,6;UBERON:0005174,5.45e-09,6;UBERON:0001137,5.45e-09,6;UBERON:0001948,8.35e-08,5;UBERON:0002315,8.35e-08,5;UBERON:0002950,3.02e-07,4;UBERON:0001891,3.02e-07,4;UBERON:0009616,3.02e-07,4;UBERON:0010286,3.02e-07,4|phase1_expression=0.320297694209588,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0.315462165358238,0.274228867211478,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0.515672092277442,0.606949382578793,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,0.311068836925433,0,0.210324961351382,1.14260393761521,1.32521124570968,0.244981598429908,0.0958454710182364,0,0,1.40456071893706,1.84327839907492,0.527545150920775,0.365950574409639,0,1.67509799400829,2.8138130501584,2.59757021220577,1.17851434189467,1.70846016958924,1.4911955666024,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0.593768556259299,0.520455980298408,0,0.691846491768175,0.150722640552623,0.352766121407114,0.125666591329675,0.247194967734374,0.144599356919912,0,0,0,0,0,5.27005434620785,5.86450779077674,0,0,0,0,3.14560342750128,1.83000241127451,0.502617408451458,5.21472960576829,5.37002460393694,1.87009240103604,2.10913641988085,0.203678727700633,0,0,0,0,0,0,0.150704817835715,0.680364991513279,0.2562274405697,0.374806898238915,0,0,0,0,0,0,0,0,0,0,0,0,2.89976081549703,1.87620847984877,3.78130329068131,5.44512891845984,5.70616272067471,4.31947916084659,6.27841650826101,8.31647544338819,10.8591768401468,12.341988743511,8.70087559619205,10.133601193232,6.87139940899062,7.24515380460467,6.97873377553933,5.67782861123144,0.102904612379284,0,0,0.213288250535234,0.232236671860439,0.257734922644187,0,0,0,0,0.16469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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:20191 | |||
|HGNC= | |||
|MCL_coexpression_id=405 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9Q401,uniprot:Q80ZZ5,uniprot:Q60835,uniprot:Q9ERN6 | |||
|association_with_transcript=76bp_to_ENSMUST00000021750,ENSMUST00000170156,NM_023868,uc007pld.1,uc007plf.1,uc011ywc.1_5end | |||
|cluster_id=chr13:12199124..12199135,- | |||
|description=CAGE_peak_3_at_Ryr2_5end | |||
|id=chr13:12199124..12199135,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!7.22e-15!71;UBERON:0003075!7.22e-15!71;UBERON:0007284!7.22e-15!71;UBERON:0001017!2.10e-14!73;UBERON:0005743!2.10e-14!73;UBERON:0000025!3.45e-14!114;UBERON:0001049!8.09e-14!52;UBERON:0005068!8.09e-14!52;UBERON:0006241!8.09e-14!52;UBERON:0007135!8.09e-14!52;UBERON:0000073!1.79e-13!75;UBERON:0001016!1.79e-13!75;UBERON:0004111!3.11e-13!122;UBERON:0004121!9.88e-13!102;UBERON:0000924!9.88e-13!102;UBERON:0006601!9.88e-13!102;UBERON:0007100!3.46e-12!18;UBERON:0000948!3.46e-12!18;UBERON:0005498!3.46e-12!18;UBERON:0004140!3.46e-12!18;UBERON:0009881!3.46e-12!18;UBERON:0004141!3.46e-12!18;UBERON:0003084!3.46e-12!18;UBERON:0007005!3.46e-12!18;UBERON:0004139!3.46e-12!18;UBERON:0004291!3.46e-12!18;UBERON:0002020!5.29e-12!34;UBERON:0000955!8.04e-12!50;UBERON:0006238!8.04e-12!50;UBERON:0002616!2.99e-11!49;UBERON:0000033!5.61e-10!63;UBERON:0003080!1.44e-09!40;UBERON:0002791!2.26e-09!29;UBERON:0003528!2.26e-09!29;UBERON:0001893!2.26e-09!29;UBERON:0002780!5.06e-09!39;UBERON:0001890!5.06e-09!39;UBERON:0006240!5.06e-09!39;UBERON:0002021!8.41e-09!10;UBERON:0000411!8.41e-09!10;UBERON:0001950!8.41e-09!10;UBERON:0004535!1.60e-08!23;UBERON:0001009!1.60e-08!23;UBERON:0003056!2.99e-08!49;UBERON:0000483!4.80e-08!181;UBERON:0000477!1.17e-07!154;UBERON:0000119!1.19e-07!183;UBERON:0000956!9.25e-07!21;UBERON:0001869!9.25e-07!21;UBERON:0000203!9.25e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,6.12e-32,92;UBERON:0000025,7.64e-24,114;UBERON:0000073,1.75e-23,54;UBERON:0007100,2.87e-23,18;UBERON:0000948,2.87e-23,18;UBERON:0005498,2.87e-23,18;UBERON:0004140,2.87e-23,18;UBERON:0009881,2.87e-23,18;UBERON:0004141,2.87e-23,18;UBERON:0003084,2.87e-23,18;UBERON:0007005,2.87e-23,18;UBERON:0004139,2.87e-23,18;UBERON:0004291,2.87e-23,18;UBERON:0001049,8.33e-23,52;UBERON:0005068,8.33e-23,52;UBERON:0006241,8.33e-23,52;UBERON:0007135,8.33e-23,52;UBERON:0004111,1.28e-21,122;UBERON:0001017,2.40e-19,73;UBERON:0002020,4.40e-19,34;UBERON:0002021,9.66e-19,10;UBERON:0000411,9.66e-19,10;UBERON:0001950,9.66e-19,10;UBERON:0001016,1.30e-18,75;UBERON:0000955,1.77e-17,47;UBERON:0006238,1.77e-17,47;UBERON:0004535,2.59e-17,23;UBERON:0001009,2.59e-17,23;UBERON:0002346,3.76e-17,64;UBERON:0003075,3.76e-17,64;UBERON:0007284,3.76e-17,64;UBERON:0002616,2.67e-16,46;UBERON:0003103,6.94e-15,43;UBERON:0010371,3.83e-14,73;UBERON:0003528,1.80e-13,29;UBERON:0002791,1.80e-13,29;UBERON:0001893,1.80e-13,29;UBERON:0004121,5.32e-13,95;UBERON:0000924,5.32e-13,95;UBERON:0006601,5.32e-13,95;UBERON:0003080,1.03e-12,40;UBERON:0002619,2.58e-12,17;UBERON:0003076,3.53e-12,12;UBERON:0003057,3.53e-12,12;UBERON:0000483,3.92e-12,174;UBERON:0000119,7.03e-12,176;UBERON:0002780,1.19e-11,39;UBERON:0001890,1.19e-11,39;UBERON:0006240,1.19e-11,39;UBERON:0000956,2.24e-11,21;UBERON:0001869,2.24e-11,21;UBERON:0000203,2.24e-11,21;UBERON:0004872,7.37e-11,33;UBERON:0003056,1.65e-09,49;UBERON:0002240,5.45e-09,6;UBERON:0005174,5.45e-09,6;UBERON:0001137,5.45e-09,6;UBERON:0001948,8.35e-08,5;UBERON:0002315,8.35e-08,5;UBERON:0002950,3.02e-07,4;UBERON:0001891,3.02e-07,4;UBERON:0009616,3.02e-07,4;UBERON:0010286,3.02e-07,4 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0.315462165358238,0.274228867211478,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0.515672092277442,0.606949382578793,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,0.311068836925433,0,0.210324961351382,1.14260393761521,1.32521124570968,0.244981598429908,0.0958454710182364,0,0,1.40456071893706,1.84327839907492,0.527545150920775,0.365950574409639,0,1.67509799400829,2.8138130501584,2.59757021220577,1.17851434189467,1.70846016958924,1.4911955666024,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0.593768556259299,0.520455980298408,0,0.691846491768175,0.150722640552623,0.352766121407114,0.125666591329675,0.247194967734374,0.144599356919912,0,0,0,0,0,5.27005434620785,5.86450779077674,0,0,0,0,3.14560342750128,1.83000241127451,0.502617408451458,5.21472960576829,5.37002460393694,1.87009240103604,2.10913641988085,0.203678727700633,0,0,0,0,0,0,0.150704817835715,0.680364991513279,0.2562274405697,0.374806898238915,0,0,0,0,0,0,0,0,0,0,0,0,2.89976081549703,1.87620847984877,3.78130329068131,5.44512891845984,5.70616272067471,4.31947916084659,6.27841650826101,8.31647544338819,10.8591768401468,12.341988743511,8.70087559619205,10.133601193232,6.87139940899062,7.24515380460467,6.97873377553933,5.67782861123144,0.102904612379284,0,0,0.213288250535234,0.232236671860439,0.257734922644187,0,0,0,0,0.164698954724011,0.251335208800269,0,0.38992817423824,0,0,0.199141273254367,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.37898282354097,0.162964976442026,0,0.234690248288502,0.335012514883631,0.952174563544055,0,0.315270288212382,0.44292937929755,0.478364305972461,0.327726629431476,0.345369963731791,0,0,0,0,0,1.76605648986571,1.52375192569864,0,0,0.631016438832513,0.390438744296638,0.861693590931196,0,0,0.283076530788832,0.404810701674894,0,0,3.21321316421807,0.141940085208269,0,0.488660878060728,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0.177340233642274,0.178368817602071,0.493647061806363,0,0,0,0,0.16488625294148,0,0.0603129249281559,0.119372344003136,0.164140899745061,0,1.11255181206306,0.170870880797853,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.216010681643603,0.209088296014469,0,0.404593039154462,0.41326727862668,0,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0,0.129159823477731,0.168956125490778,0.352071715937262,0,0.104859344425711,0,0,0,0,0.205421914329655,0,0.179026695667481,0.198681354781265,0.120195449519969,0.147689527174577,0,0,0.100826185136841,0,0,0,0,0,0,0,0.386379188064381,0,0,0,0,5.0827665835536,6.44455331110048,4.01026859407578,4.29632955859219,6.16574267793578,6.7985450765073,5.40018000185445,3.60256962579376,7.25027854374727,5.69536342927002,0,0,0,0.243106717068294,0,0.551530525350042,0.222246727801615,0.206035057238894,0.320919209591815,0.505394423527595,0,0.377252682772152,0.0936415074698824,0.192075457214608,0.229741875822453,0,0.579421629724277,0.192909220463705,0.824171801606613,0,0,0,0.238436189947321,0,0.376437521661322,0.0846146078916765,0,0,0.135804113845862,0.561142271657738,0.593175090620871,0.29551344712669,0,0.309873682371932,0,0.749431733813838,0.701794825336225,0.429742108096597,0,0,0 | |||
|short_description=p3@Ryr2 | |||
}} |
Revision as of 16:15, 5 August 2015
Short description: | p3@Ryr2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ryr2_5end |
Coexpression cluster: | MCL_coexpression_mm9:405 |
Association with transcript: | 76bp_to_ENSMUST00000021750, ENSMUST00000170156, NM_023868, uc007pld.1, uc007plf.1, uc011ywc.1_5end |
EntrezGene: | 20191 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data