FFCP PHASE1:Mm9::chr13:24743303..24743307,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=177|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:24743303..24743307,+|id=chr13:24743303..24743307,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000553,2.33e-12,6;CL:0000556,2.33e-12,6;CL:0002031,3.10e-12,25;CL:0000988,6.73e-11,32;CL:0002032,6.73e-11,32;CL:0000037,6.73e-11,32;CL:0000837,6.73e-11,32;CL:0000838,2.78e-08,12;CL:0000050,4.02e-08,9;CL:0000542,1.36e-07,13;CL:0000051,1.36e-07,13;CL:0002320,7.63e-07,46;CL:0000134,7.63e-07,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,1.48e-09,3;DOID:4045,1.48e-09,3|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.09e-16,45;UBERON:0003061,1.09e-16,45;UBERON:0002193,2.11e-15,48;UBERON:0002405,2.11e-15,48;UBERON:0004177,1.71e-11,29;UBERON:0005057,1.71e-11,29;UBERON:0000077,4.05e-09,35;UBERON:0002106,5.95e-08,6;UBERON:0004457,5.95e-08,6;UBERON:0000042,5.95e-08,6;UBERON:0004854,5.95e-08,6;UBERON:0009034,5.95e-08,6;UBERON:0002095,5.95e-08,6;UBERON:0004782,5.95e-08,6;UBERON:0003281,5.95e-08,6;UBERON:0009664,5.95e-08,6;UBERON:0002296,5.95e-08,6;UBERON:0005602,5.95e-08,6;UBERON:0001179,5.95e-08,6;UBERON:0006293,5.95e-08,6;UBERON:0003081,9.39e-08,87;UBERON:0000926,6.40e-07,120;UBERON:0004120,6.40e-07,120;UBERON:0006603,6.40e-07,120;UBERON:0002384,7.63e-07,46|phase1_expression=0.320297694209588,0,0,0,0,0,0,3.09895976259783,0.281577444303333,0,0,0.239316476986009,5.30722262786738,5.15780374272085,1.33243904726265,1.82227740650843,0,7.09789872056035,7.54129384831563,3.39511721438424,0.0850432901510698,1.19149141441062,1.56719873483361,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,5.02237956884289,1.5626706890476,5.23523743973798,6.47054636834116,8.87959130445979,1.94204141212461,0,0.202753862439029,0.367093504323363,0,0,0,0,0,0,3.52343472721246,0,0.336093799142464,0,0.286533439938757,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0.210324961351382,0,0,0,0.191690942036473,0,0,0.383062014255563,0,0.131886287730194,0,0,0,0,0.45839474333043,0,0.284743361598206,0.186399445825301,0.075726193333184,0,0,0,0,0,0,0,0.421333260395256,0.170430322578058,0,0,0,0,0,0,0,0,0,0.34255163915718,0.776813650941515,0.148442139064825,0,0,0.230615497256059,0,0.23517741427141,0,0,0.289198713839823,0.884610551949874,0.323533699894818,0.883366073841574,0.969750506270444,0,0,0,0,0.479260498023681,0.599902730993408,0.381210681219194,0,0,0.376963056338593,0.173824320192276,0,0.20778804455956,0,0.407357455401265,0.746441823660558,0,0,0.130120442962704,0,0,0.30140963567143,0.748401490664606,0.896796041993948,0.655912071918102,0.517406741478031,0,0,0,0,0,0.348252166522167,0,0.199034266818493,0.702213187313235,0,1.98914449576915,0.207125772535502,0,0,0.23674473558521,0.393528463494808,0.925602677324269,0.232533944750408,1.60964040839772,0.467061369468678,0.329119699826961,0.32833492815819,0.243206428637567,0.146199987425332,0.439100230582101,0.134206418760372,0.210289948564127,0.617427674275707,0,0,0.213288250535234,0.232236671860439,0,0,0,0,0,0,0,0,0.19496408711912,0.898819408654221,0.216138049874694,0.199141273254367,0,0.228497025219458,0,0,0,0.0701358198903186,0.189709611372772,0.147610147979602,0.156998727841375,0,0,0.166845105716094,0,0,0.202860121388503,0,0,0,0.486405680325106,0,0,0.372140947668503,0.624075346229121,0,0,0,0.739012760666419,0,0,0,0,0,0,0,0.157635144106191,0.44292937929755,0.318909537314974,0.81931657357869,1.55416483679306,0.289298117163023,0,0,0.983528546038072,0.275936746304732,0.160550589987792,0.117211686592203,0,0,0.94652465824877,0.390438744296638,0.215423397732799,0,0,0,0.809621403349789,0.292255857911312,0,0.321321316421807,0,0.534196811001766,0.162886959353576,0.164970122972535,1.32745138339963,0,0,0.188605079755898,0,0,0,0.363533729477506,0,0.316036757935816,0,0,0.680879211507576,0,0,0,0.177340233642274,0.178368817602071,0,0,0,0.21183207086382,0,0.32977250588296,0.807322133479528,0.120625849856312,0.358117032009409,0,0,0,1.70870880797853,0.206386867963223,0.925972636848558,2.26042148405629,2.87057878214153,2.28778173206523,0,0.559805809294632,0.552799895217695,0,0,0,0,0.209088296014469,0,0.134864346384821,0.0826534557253359,0.523511883968059,0,0,0,0.299033092087958,0.165458490457098,0,0.258319646955462,0.844780627453891,0.234714477291508,0.39061315453185,0.314578033277133,0,0,0,0.202725215290164,0.513554785824136,0,0.895133478337407,0.79472541912506,1.08175904567972,0.886137163047463,1.11063094942962,0.533447646584999,1.20991422164209,1.16949456887703,1.44317762460494,2.10378423926824,0.226730383615211,0,0,0,0,0.93841237725591,0.36630324853453,0.643105137237198,0,0.564751842617067,0.460325236507177,1.14579102687879,0.859265911718438,0,0,0,0.45032120322422,0,0,0,0,0.170733605754134,0.486213434136588,0,0,0.666740183404846,0.206035057238894,0,0.505394423527595,0.760437899670719,0.188626341386076,0.37456602987953,0.320125762024346,0.229741875822453,0,0.231768651889711,0.192909220463705,0,0.44159676040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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=177 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:24743303..24743307,+ | |||
|description=CAGE_peak_at_chr13:24743303..24743307,+ | |||
|id=chr13:24743303..24743307,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,2.33e-12,6;CL:0000556,2.33e-12,6;CL:0002031,3.10e-12,25;CL:0000988,6.73e-11,32;CL:0002032,6.73e-11,32;CL:0000037,6.73e-11,32;CL:0000837,6.73e-11,32;CL:0000838,2.78e-08,12;CL:0000050,4.02e-08,9;CL:0000542,1.36e-07,13;CL:0000051,1.36e-07,13;CL:0002320,7.63e-07,46;CL:0000134,7.63e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.48e-09,3;DOID:4045,1.48e-09,3 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.09e-16,45;UBERON:0003061,1.09e-16,45;UBERON:0002193,2.11e-15,48;UBERON:0002405,2.11e-15,48;UBERON:0004177,1.71e-11,29;UBERON:0005057,1.71e-11,29;UBERON:0000077,4.05e-09,35;UBERON:0002106,5.95e-08,6;UBERON:0004457,5.95e-08,6;UBERON:0000042,5.95e-08,6;UBERON:0004854,5.95e-08,6;UBERON:0009034,5.95e-08,6;UBERON:0002095,5.95e-08,6;UBERON:0004782,5.95e-08,6;UBERON:0003281,5.95e-08,6;UBERON:0009664,5.95e-08,6;UBERON:0002296,5.95e-08,6;UBERON:0005602,5.95e-08,6;UBERON:0001179,5.95e-08,6;UBERON:0006293,5.95e-08,6;UBERON:0003081,9.39e-08,87;UBERON:0000926,6.40e-07,120;UBERON:0004120,6.40e-07,120;UBERON:0006603,6.40e-07,120;UBERON:0002384,7.63e-07,46 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,3.09895976259783,0.281577444303333,0,0,0.239316476986009,5.30722262786738,5.15780374272085,1.33243904726265,1.82227740650843,0,7.09789872056035,7.54129384831563,3.39511721438424,0.0850432901510698,1.19149141441062,1.56719873483361,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,5.02237956884289,1.5626706890476,5.23523743973798,6.47054636834116,8.87959130445979,1.94204141212461,0,0.202753862439029,0.367093504323363,0,0,0,0,0,0,3.52343472721246,0,0.336093799142464,0,0.286533439938757,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0.210324961351382,0,0,0,0.191690942036473,0,0,0.383062014255563,0,0.131886287730194,0,0,0,0,0.45839474333043,0,0.284743361598206,0.186399445825301,0.075726193333184,0,0,0,0,0,0,0,0.421333260395256,0.170430322578058,0,0,0,0,0,0,0,0,0,0.34255163915718,0.776813650941515,0.148442139064825,0,0,0.230615497256059,0,0.23517741427141,0,0,0.289198713839823,0.884610551949874,0.323533699894818,0.883366073841574,0.969750506270444,0,0,0,0,0.479260498023681,0.599902730993408,0.381210681219194,0,0,0.376963056338593,0.173824320192276,0,0.20778804455956,0,0.407357455401265,0.746441823660558,0,0,0.130120442962704,0,0,0.30140963567143,0.748401490664606,0.896796041993948,0.655912071918102,0.517406741478031,0,0,0,0,0,0.348252166522167,0,0.199034266818493,0.702213187313235,0,1.98914449576915,0.207125772535502,0,0,0.23674473558521,0.393528463494808,0.925602677324269,0.232533944750408,1.60964040839772,0.467061369468678,0.329119699826961,0.32833492815819,0.243206428637567,0.146199987425332,0.439100230582101,0.134206418760372,0.210289948564127,0.617427674275707,0,0,0.213288250535234,0.232236671860439,0,0,0,0,0,0,0,0,0.19496408711912,0.898819408654221,0.216138049874694,0.199141273254367,0,0.228497025219458,0,0,0,0.0701358198903186,0.189709611372772,0.147610147979602,0.156998727841375,0,0,0.166845105716094,0,0,0.202860121388503,0,0,0,0.486405680325106,0,0,0.372140947668503,0.624075346229121,0,0,0,0.739012760666419,0,0,0,0,0,0,0,0.157635144106191,0.44292937929755,0.318909537314974,0.81931657357869,1.55416483679306,0.289298117163023,0,0,0.983528546038072,0.275936746304732,0.160550589987792,0.117211686592203,0,0,0.94652465824877,0.390438744296638,0.215423397732799,0,0,0,0.809621403349789,0.292255857911312,0,0.321321316421807,0,0.534196811001766,0.162886959353576,0.164970122972535,1.32745138339963,0,0,0.188605079755898,0,0,0,0.363533729477506,0,0.316036757935816,0,0,0.680879211507576,0,0,0,0.177340233642274,0.178368817602071,0,0,0,0.21183207086382,0,0.32977250588296,0.807322133479528,0.120625849856312,0.358117032009409,0,0,0,1.70870880797853,0.206386867963223,0.925972636848558,2.26042148405629,2.87057878214153,2.28778173206523,0,0.559805809294632,0.552799895217695,0,0,0,0,0.209088296014469,0,0.134864346384821,0.0826534557253359,0.523511883968059,0,0,0,0.299033092087958,0.165458490457098,0,0.258319646955462,0.844780627453891,0.234714477291508,0.39061315453185,0.314578033277133,0,0,0,0.202725215290164,0.513554785824136,0,0.895133478337407,0.79472541912506,1.08175904567972,0.886137163047463,1.11063094942962,0.533447646584999,1.20991422164209,1.16949456887703,1.44317762460494,2.10378423926824,0.226730383615211,0,0,0,0,0.93841237725591,0.36630324853453,0.643105137237198,0,0.564751842617067,0.460325236507177,1.14579102687879,0.859265911718438,0,0,0,0.45032120322422,0,0,0,0,0.170733605754134,0.486213434136588,0,0,0.666740183404846,0.206035057238894,0,0.505394423527595,0.760437899670719,0.188626341386076,0.37456602987953,0.320125762024346,0.229741875822453,0,0.231768651889711,0.192909220463705,0,0.441596760403192,0,0.532427418478012,0,0.436039249896986,0.282328141245992,0.423073039458382,0.548783918618318,0.789209134313529,0.135804113845862,0,0.355905054372522,0.394017929502254,0.409231043169689,0.464810523557898,0,0.249810577937946,0.467863216890817,0,0,0.661774257358546,0 | |||
|short_description=p@chr13:24743303..24743307,+ | |||
}} |
Latest revision as of 20:10, 5 August 2015
Short description: | p@chr13:24743303..24743307, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:24743303..24743307, + |
Coexpression cluster: | MCL_coexpression_mm9:177 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 2.33e-12 | 6 |
megakaryocyte | 2.33e-12 | 6 |
hematopoietic lineage restricted progenitor cell | 3.10e-12 | 25 |
hematopoietic cell | 6.73e-11 | 32 |
hematopoietic oligopotent progenitor cell | 6.73e-11 | 32 |
hematopoietic stem cell | 6.73e-11 | 32 |
hematopoietic multipotent progenitor cell | 6.73e-11 | 32 |
lymphoid lineage restricted progenitor cell | 2.78e-08 | 12 |
megakaryocyte-erythroid progenitor cell | 4.02e-08 | 9 |
lymphocyte | 1.36e-07 | 13 |
common lymphoid progenitor | 1.36e-07 | 13 |
connective tissue cell | 7.63e-07 | 46 |
mesenchymal cell | 7.63e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.09e-16 | 45 |
blood island | 1.09e-16 | 45 |
hemolymphoid system | 2.11e-15 | 48 |
immune system | 2.11e-15 | 48 |
hemopoietic organ | 1.71e-11 | 29 |
immune organ | 1.71e-11 | 29 |
mixed endoderm/mesoderm-derived structure | 4.05e-09 | 35 |
spleen | 5.95e-08 | 6 |
cavity lining | 5.95e-08 | 6 |
serous membrane | 5.95e-08 | 6 |
gastrointestinal system mesentery | 5.95e-08 | 6 |
stomach region | 5.95e-08 | 6 |
mesentery | 5.95e-08 | 6 |
gastrointestinal system serosa | 5.95e-08 | 6 |
mesentery of stomach | 5.95e-08 | 6 |
gut mesentery | 5.95e-08 | 6 |
dorsal mesentery | 5.95e-08 | 6 |
dorsal mesogastrium | 5.95e-08 | 6 |
peritoneal cavity | 5.95e-08 | 6 |
spleen primordium | 5.95e-08 | 6 |
lateral plate mesoderm | 9.39e-08 | 87 |
mesoderm | 6.40e-07 | 120 |
mesoderm-derived structure | 6.40e-07 | 120 |
presumptive mesoderm | 6.40e-07 | 120 |
connective tissue | 7.63e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.48e-09 | 3 |
muscle cancer | 1.48e-09 | 3 |