FFCP PHASE1:Mm9::chr13:5860402..5860419,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:5860402..5860419,-|id=chr13:5860402..5860419,-|ontology_enrichment_celltype=CL:0000144!3.89e-21!121;CL:0000012!3.89e-21!121;CL:0002371!1.74e-19!118;CL:0000548!1.39e-17!115;CL:0000004!1.39e-17!115;CL:0000255!1.39e-17!115;CL:0000034!1.59e-16!97;CL:0000063!1.81e-16!66;CL:0000723!1.68e-14!91;CL:0000048!1.68e-14!91;CL:0002320!2.27e-10!46;CL:0000134!2.27e-10!46;CL:0000988!1.12e-09!32;CL:0002032!1.12e-09!32;CL:0000037!1.12e-09!32;CL:0000566!1.12e-09!32;CL:0000837!1.12e-09!32;CL:0000219!1.72e-09!54;CL:0002031!2.42e-07!25|ontology_enrichment_celltype_v019_2=CL:0002320,2.21e-18,46;CL:0000134,2.21e-18,46;CL:0000988,2.72e-18,32;CL:0002032,2.72e-18,32;CL:0000037,2.72e-18,32;CL:0000837,2.72e-18,32;CL:0000034,2.77e-15,97;CL:0000219,1.46e-14,54;CL:0000049,7.25e-14,19;CL:0000723,1.24e-13,91;CL:0000048,1.24e-13,91;CL:0002563,1.04e-12,9;CL:0002251,1.04e-12,9;CL:0002076,6.98e-12,15;CL:0002031,8.60e-12,25;CL:0000066,3.26e-10,25;CL:0000075,3.87e-10,7;CL:0000223,4.36e-10,20;CL:0000763,4.91e-10,16;CL:0000239,4.34e-09,6;CL:0000677,4.34e-09,6;CL:0000584,4.34e-09,6;CL:0000738,7.21e-07,17;CL:0002087,7.21e-07,17|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0050686,1.09e-07,6|ontology_enrichment_uberon=UBERON:0002384!2.27e-10!46;UBERON:0002204!2.70e-07!32;UBERON:0000485!8.81e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.21e-18,46;UBERON:0003350,1.04e-12,9;UBERON:0004808,1.04e-12,9;UBERON:0001277,1.04e-12,9;UBERON:0000485,2.60e-12,11;UBERON:0002371,6.60e-10,16;UBERON:0002204,3.48e-09,32;UBERON:0001242,3.24e-08,13;UBERON:0001262,3.24e-08,13;UBERON:0004786,3.24e-08,13;UBERON:0001474,8.84e-08,22;UBERON:0004765,8.84e-08,22;UBERON:0001434,8.84e-08,22;UBERON:0000344,7.04e-07,15|phase1_expression=0.80074423552397,2.09385244583617,1.36499771816861,5.74682001482977,3.50627010962443,1.00727563147134,1.86890112476421,5.68142623142936,1.40788722151667,0.70219357896598,0.68487187290202,0.558405112967355,8.9024379564227,4.19617931611188,0.333109761815663,0,1.39912375625629,1.57731082679119,1.64537320326887,1.69755860719212,0.17008658030214,0.595745707205312,0,0.159992422793407,0,0.57423196411502,0.430761996159075,1.72376986148711,0.190023419456374,0,0.665191531965914,5.08024538767705,2.46025915033828,0,2.59966457776147,1.16364251750945,1.83752420636132,9.62622750694888,13.2827008569046,4.71171369576418,57.6466858270394,17.7591826089196,5.82612423637384,0.251793635951155,0.405507724878058,0.367093504323363,0.782391344348039,0.65407546914134,0,0.194429899074283,0.139986421625363,0,5.36904339384756,4.35217285206807,7.39406358113421,0.771778308107841,1.14613375975503,0.515672092277442,0.606949382578793,1.05798195854407,0.633831403506179,1.35537812827653,2.66788438833342,0.899899717281399,1.97773272513395,2.8419204597844,0.599200221036809,0.384218305321555,0.207379224616955,0.405017814995072,0.210324961351382,0.571301968807607,0.883474163806454,0,0.0958454710182364,0.919218786610021,0,0.255374676170375,0,0.395658863190582,0.640413505216868,1.04182674111352,0.837548997004143,0,0,0.883885756421003,0.284743361598206,0.745597783301202,0.605809546665472,0.906858721281426,9.85539261585705,0.860423876981386,0,0,0,0,0.140444420131752,0.681721290312231,0.779358013808606,0.35333957451034,1.26759077799012,1.28326477414318,0,0,0.649473123033642,1.01343946190039,1.01104889002957,0.22836775943812,0.258937883647172,0.148442139064825,0.693941307064543,0,0.230615497256059,0,0.117588707135705,0.125666591329675,1.23597483867187,0.289198713839823,0,0.323533699894818,0,0.484875253135222,0,0.292780797011547,0,0.255457055208591,1.7972268675888,5.99902730993408,3.17675567682662,0.149790639404823,0,0.251308704225729,0,0,0,0,0.407357455401265,0.373220911830279,0,0,0.260240885925407,0.459804208866946,0.180062129805349,0.452114453507145,0.408218994907967,0.512454881139399,0.281105173679186,0,0,0.567318240503458,0.175951124163949,0.219195732427575,0.278047249225598,0.348252166522167,1.02891068203972,0.398068533636986,1.40442637462647,3.08817488537658,3.9782889915383,0.207125772535502,0,0.36012412292203,0,0,0,0,1.07309360559848,0.350296027101508,0.16455984991348,0,0.56748166682099,0.292399974850665,0.219550115291051,0.402619256281115,0,0.205809224758569,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0.198956472041151,0,0,0.432276099749388,0.199141273254367,0.379335801906163,0.114248512609729,0,0,0.193952487167626,0.561086559122548,0.126473074248515,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757736633841335,0,0.482443521363367,0.184753190166605,0.189491411770485,0.325929952884052,0.339490171550376,0.234690248288502,0.837531287209079,0.952174563544055,0.975668239288994,0.788175720530955,1.10732344824387,0.159454768657487,0.81931657357869,0.345369963731791,1.01254341007058,3.01582567878545,2.17562273527484,0,0,0,0.117211686592203,0.163934945376675,0.252470927204373,0.631016438832513,0.390438744296638,0.4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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:5860402..5860419,- | |||
|description=CAGE_peak_at_chr13:5860402..5860419,- | |||
|id=chr13:5860402..5860419,- | |||
|ontology_enrichment_celltype=CL:0000144!3.89e-21!121;CL:0000012!3.89e-21!121;CL:0002371!1.74e-19!118;CL:0000548!1.39e-17!115;CL:0000004!1.39e-17!115;CL:0000255!1.39e-17!115;CL:0000034!1.59e-16!97;CL:0000063!1.81e-16!66;CL:0000723!1.68e-14!91;CL:0000048!1.68e-14!91;CL:0002320!2.27e-10!46;CL:0000134!2.27e-10!46;CL:0000988!1.12e-09!32;CL:0002032!1.12e-09!32;CL:0000037!1.12e-09!32;CL:0000566!1.12e-09!32;CL:0000837!1.12e-09!32;CL:0000219!1.72e-09!54;CL:0002031!2.42e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002320,2.21e-18,46;CL:0000134,2.21e-18,46;CL:0000988,2.72e-18,32;CL:0002032,2.72e-18,32;CL:0000037,2.72e-18,32;CL:0000837,2.72e-18,32;CL:0000034,2.77e-15,97;CL:0000219,1.46e-14,54;CL:0000049,7.25e-14,19;CL:0000723,1.24e-13,91;CL:0000048,1.24e-13,91;CL:0002563,1.04e-12,9;CL:0002251,1.04e-12,9;CL:0002076,6.98e-12,15;CL:0002031,8.60e-12,25;CL:0000066,3.26e-10,25;CL:0000075,3.87e-10,7;CL:0000223,4.36e-10,20;CL:0000763,4.91e-10,16;CL:0000239,4.34e-09,6;CL:0000677,4.34e-09,6;CL:0000584,4.34e-09,6;CL:0000738,7.21e-07,17;CL:0002087,7.21e-07,17 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0050686,1.09e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0002384!2.27e-10!46;UBERON:0002204!2.70e-07!32;UBERON:0000485!8.81e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.21e-18,46;UBERON:0003350,1.04e-12,9;UBERON:0004808,1.04e-12,9;UBERON:0001277,1.04e-12,9;UBERON:0000485,2.60e-12,11;UBERON:0002371,6.60e-10,16;UBERON:0002204,3.48e-09,32;UBERON:0001242,3.24e-08,13;UBERON:0001262,3.24e-08,13;UBERON:0004786,3.24e-08,13;UBERON:0001474,8.84e-08,22;UBERON:0004765,8.84e-08,22;UBERON:0001434,8.84e-08,22;UBERON:0000344,7.04e-07,15 | |||
|phase1_expression=0.80074423552397,2.09385244583617,1.36499771816861,5.74682001482977,3.50627010962443,1.00727563147134,1.86890112476421,5.68142623142936,1.40788722151667,0.70219357896598,0.68487187290202,0.558405112967355,8.9024379564227,4.19617931611188,0.333109761815663,0,1.39912375625629,1.57731082679119,1.64537320326887,1.69755860719212,0.17008658030214,0.595745707205312,0,0.159992422793407,0,0.57423196411502,0.430761996159075,1.72376986148711,0.190023419456374,0,0.665191531965914,5.08024538767705,2.46025915033828,0,2.59966457776147,1.16364251750945,1.83752420636132,9.62622750694888,13.2827008569046,4.71171369576418,57.6466858270394,17.7591826089196,5.82612423637384,0.251793635951155,0.405507724878058,0.367093504323363,0.782391344348039,0.65407546914134,0,0.194429899074283,0.139986421625363,0,5.36904339384756,4.35217285206807,7.39406358113421,0.771778308107841,1.14613375975503,0.515672092277442,0.606949382578793,1.05798195854407,0.633831403506179,1.35537812827653,2.66788438833342,0.899899717281399,1.97773272513395,2.8419204597844,0.599200221036809,0.384218305321555,0.207379224616955,0.405017814995072,0.210324961351382,0.571301968807607,0.883474163806454,0,0.0958454710182364,0.919218786610021,0,0.255374676170375,0,0.395658863190582,0.640413505216868,1.04182674111352,0.837548997004143,0,0,0.883885756421003,0.284743361598206,0.745597783301202,0.605809546665472,0.906858721281426,9.85539261585705,0.860423876981386,0,0,0,0,0.140444420131752,0.681721290312231,0.779358013808606,0.35333957451034,1.26759077799012,1.28326477414318,0,0,0.649473123033642,1.01343946190039,1.01104889002957,0.22836775943812,0.258937883647172,0.148442139064825,0.693941307064543,0,0.230615497256059,0,0.117588707135705,0.125666591329675,1.23597483867187,0.289198713839823,0,0.323533699894818,0,0.484875253135222,0,0.292780797011547,0,0.255457055208591,1.7972268675888,5.99902730993408,3.17675567682662,0.149790639404823,0,0.251308704225729,0,0,0,0,0.407357455401265,0.373220911830279,0,0,0.260240885925407,0.459804208866946,0.180062129805349,0.452114453507145,0.408218994907967,0.512454881139399,0.281105173679186,0,0,0.567318240503458,0.175951124163949,0.219195732427575,0.278047249225598,0.348252166522167,1.02891068203972,0.398068533636986,1.40442637462647,3.08817488537658,3.9782889915383,0.207125772535502,0,0.36012412292203,0,0,0,0,1.07309360559848,0.350296027101508,0.16455984991348,0,0.56748166682099,0.292399974850665,0.219550115291051,0.402619256281115,0,0.205809224758569,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0.198956472041151,0,0,0.432276099749388,0.199141273254367,0.379335801906163,0.114248512609729,0,0,0.193952487167626,0.561086559122548,0.126473074248515,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757736633841335,0,0.482443521363367,0.184753190166605,0.189491411770485,0.325929952884052,0.339490171550376,0.234690248288502,0.837531287209079,0.952174563544055,0.975668239288994,0.788175720530955,1.10732344824387,0.159454768657487,0.81931657357869,0.345369963731791,1.01254341007058,3.01582567878545,2.17562273527484,0,0,0,0.117211686592203,0.163934945376675,0.252470927204373,0.631016438832513,0.390438744296638,0.430846795465598,0.716906393857656,0.222798674082394,0.283076530788832,0.404810701674894,0.584511715822624,0.395287777946524,0.321321316421807,0.141940085208269,0.178065603667255,0.488660878060728,0.494910368917606,0,0.485561272309963,0.302323556964751,0,0,0.307435147943927,0,0,0.356497378384721,0.632073515871632,1.05418608574999,0,1.70219802876894,0.18006109403131,0,0.428674070063185,0.709360934569094,0.356737635204141,0.493647061806363,0,0.704015124191131,0.63549621259146,0.220528398054962,0.65954501176592,0.161464426695906,0.663442174209714,0.477489376012546,0,0.291480836629851,0,0.170870880797853,0.412773735926445,0.185194527369712,0,0,0,1.01987057996313,3.07893195112048,1.93479963326193,0,0.158167996790568,0,0.432021363287205,0.209088296014469,0.218362563746178,0.404593039154462,0.0826534557253359,0,0.259229946583586,0,0,0,0.330916980914195,0.194451188344048,0.387479470433193,0.675824501963113,0.117357238645754,0.39061315453185,0.209718688851422,0,0.288030006257865,0.948033361884535,0.202725215290164,0.308132871494482,0.129920822977795,0.179026695667481,0.198681354781265,0.240390899039938,0.443068581523732,0.504832249740738,0.228620419965,0.201652370273681,0,0.577271049841977,0.701261413089414,0.226730383615211,0.887943813496259,0.538283139656854,0.335769232728157,0.19318959403219,0.563047426353546,0.549454872801795,0.428736758158132,0,0.564751842617067,0,0,0.515559547031063,0,0,0,0,0.453142408984205,0,0.103787347584177,0.798049746802062,0,0.243106717068294,0.419226325255965,0.367687016900028,0.666740183404846,0.412070114477788,0,0,0,0,0.655490552289177,0.128050304809739,0.114870937911227,0.476293691283074,0.231768651889711,0.38581844092741,0,0,0,0.177475806159338,0.476872379894642,0.145346416632329,0.188218760830661,0.338458431566706,0,0,0,0,0.118635018124174,0.197008964751127,0,0.15493684118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| |||
|short_description=p@chr13:5860402..5860419,- | |||
}} |
Latest revision as of 05:05, 6 August 2015
Short description: | p@chr13:5860402..5860419, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:5860402..5860419, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue cell | 2.21e-18 | 46 |
mesenchymal cell | 2.21e-18 | 46 |
hematopoietic cell | 2.72e-18 | 32 |
hematopoietic oligopotent progenitor cell | 2.72e-18 | 32 |
hematopoietic stem cell | 2.72e-18 | 32 |
hematopoietic multipotent progenitor cell | 2.72e-18 | 32 |
stem cell | 2.77e-15 | 97 |
motile cell | 1.46e-14 | 54 |
common myeloid progenitor | 7.25e-14 | 19 |
somatic stem cell | 1.24e-13 | 91 |
multi fate stem cell | 1.24e-13 | 91 |
intestinal epithelial cell | 1.04e-12 | 9 |
epithelial cell of alimentary canal | 1.04e-12 | 9 |
endo-epithelial cell | 6.98e-12 | 15 |
hematopoietic lineage restricted progenitor cell | 8.60e-12 | 25 |
epithelial cell | 3.26e-10 | 25 |
columnar/cuboidal epithelial cell | 3.87e-10 | 7 |
endodermal cell | 4.36e-10 | 20 |
myeloid cell | 4.91e-10 | 16 |
brush border epithelial cell | 4.34e-09 | 6 |
gut absorptive cell | 4.34e-09 | 6 |
enterocyte | 4.34e-09 | 6 |
leukocyte | 7.21e-07 | 17 |
nongranular leukocyte | 7.21e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.21e-18 | 46 |
epithelium of mucosa | 1.04e-12 | 9 |
gastrointestinal system epithelium | 1.04e-12 | 9 |
intestinal epithelium | 1.04e-12 | 9 |
simple columnar epithelium | 2.60e-12 | 11 |
bone marrow | 6.60e-10 | 16 |
musculoskeletal system | 3.48e-09 | 32 |
intestinal mucosa | 3.24e-08 | 13 |
wall of intestine | 3.24e-08 | 13 |
gastrointestinal system mucosa | 3.24e-08 | 13 |
bone element | 8.84e-08 | 22 |
skeletal element | 8.84e-08 | 22 |
skeletal system | 8.84e-08 | 22 |
mucosa | 7.04e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
organ system cancer | 1.09e-07 | 6 |