FFCP PHASE1:Hg19::chr3:97483430..97483457,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84100 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13210 | |||
|TSSclassifier=strong | |||
|UniProt=C9IZ13 | |||
|association_with_transcript=53bp_to_ENST00000462412_5end | |||
|description=CAGE_peak_3_at_ARL6_5end | |||
|id=chr3:97483430..97483457,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000511;3.00e-07;1!CL:0002625;3.00e-07;1!CL:0000216;3.00e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,1.36e-07,1;CL:0002625,1.36e-07,1;CL:0000216,1.36e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0005425;3.00e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;7.95e-13;2!UBERON:0002757;7.95e-13;2!UBERON:0010134;7.95e-13;2!UBERON:0005408;7.95e-13;2!UBERON:0001899;7.95e-13;2!UBERON:0001136;3.00e-07;1!UBERON:0000941;3.00e-07;1!UBERON:0001343;3.00e-07;1!UBERON:0007195;3.00e-07;1!UBERON:0001785;3.00e-07;1!UBERON:0002464;3.00e-07;1!UBERON:0004904;3.00e-07;1!UBERON:0001021;3.00e-07;1!UBERON:0004910;3.00e-07;1!UBERON:0004813;3.00e-07;1!UBERON:0003296;7.83e-07;4!UBERON:0010133;7.83e-07;4!UBERON:0002784;7.83e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,2.33e-12,2;UBERON:0002757,2.33e-12,2;UBERON:0010134,2.33e-12,2;UBERON:0005408,2.33e-12,2;UBERON:0001899,2.33e-12,2;UBERON:0001136,1.36e-07,1;UBERON:0001343,1.36e-07,1;UBERON:0004910,1.36e-07,1;UBERON:0005154,1.36e-07,1;UBERON:0005295,1.36e-07,1;UBERON:0004813,1.36e-07,1;UBERON:0005297,1.36e-07,1;UBERON:0005294,1.36e-07,1;UBERON:0010141,1.36e-07,1;UBERON:0005891,1.36e-07,1;UBERON:0000941,1.63e-07,1;UBERON:0001785,1.63e-07,1;UBERON:0002464,1.63e-07,1;UBERON:0004904,1.63e-07,1;UBERON:0001021,1.63e-07,1;UBERON:0003902,1.63e-07,1;UBERON:0005425,1.63e-07,1;UBERON:0007195,3.41e-07,1 | |||
|phase1_expression=0,0,0.563817616383885,0,0,0,0,0,0,0,0,0,0.527533956456907,0,0,0,0,0,0.487932798790507,0,0.204000691244253,0,0,0.136874425072884,0.125542639594803,0.229240217243854,0.410502947249729,0.236132343941038,0,0,0.154816123316076,0,0,0,1.39440961044543,0.426507697462265,0,0,0,0.434021741431704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0.224723484445085,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0.546138611262131,0,0,0.400395987036012,0.574752439954483,0,0,0,1.17447437874188,0.764546456250458,0,0,0.263384084775077,0.590129310341499,0.786021525498329,0.205601498999509,0.83593247695339,1.30368906653436,0,0,0.222820913770347,0.589211814949674,0.443067789167242,0,0.25618263945135,0.390178042679635,0.328875809207352,0,0.289803085735052,0,0,1.04535523804977,0.113309342697566,0.383220493601921,0,0.759059076058509,0,0,0.950452044448374,0.301150238155546,0.255973222308837,1.24930726552346,0,0,0.604820229674197,0,0.724122019413995,0,0.670700859703636,0,0,0,0.434539556882471,0,0.486634870302636,0.0945348171640679,0,0.087834785693126,0.261958150995425,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0.71153252537342,0.66944122552934,0,0,0.24406205754817,0,0,0.535798369704479,0,0.337834441449967,0,0,0.549605231791222,0,0,0,0,0.12663051166458,0.132409180813219,1.14734648299525,0.709336764396714,0,0,0.74000264525148,0,0.269421344139376,0.163461903113459,0,0,0,0,0,0.149448680551801,0.117434498643765,0.323745888736263,0.280901613404497,0,0.245668634623536,0.103325781175765,0,0.247266929278557,0,0,0,0,0.277064115484183,0,0.30648779579902,0,0.226864366320042,0.179389635688862,0.213557388818567,0.211931901159562,0,0.206105058476878,0,0.18611685633159,0.168776332241266,0.292311015483596,0.252433774244115,0,0,0,0.201504196455281,0,0.386521706326594,0.545492241181669,0.573609190778008,0.487894824518382,0.265059536642971,0.348581828608555,0.207322110030741,0.252320850875628,0.36497735907583,0,0,0,0,0,0.236613600079688,0.505754070234305,0.241011029883482,0.330881918197182,0.435758888184812,0.237270619111097,0.674156540800822,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0,0,0.245976877086227,0.171567810298526,0.219500570817251,0,0.301586917234893,0.462942225792648,0,0,0,0,0.234817388471643,0,0,0,0.790204397959275,0,0,0.234004265139238,0.148631162288728,0,0.16798212819886,0.141775097242386,0.0895585227028483,0,0,0.492663237895943,0,0,0.144119953416961,0.12624243342638,0.063497894292169,0,0,0,0.308482478109971,0,0,0,0,0.2933531432838,0.258543431515556,0,0,0,0,0,0,0.266422179016099,0.285955987316295,0,0,0,0.710783897485092,0,0.301439377059586,0,0.099972991182057,0,0,0,0,1.14861935834114,0,0,0,0.716243852959582,0.224170287987055,0.197030760201927,0.431255149719035,0.77005821767849,0.254094624222463,1.30139853857622,0.773288812777695,0.335032530668698,0,0,0,0.414415513436035,0.24538298343828,0,0.542530047399471,0.207970861530807,0.356857977594324,0.157702415033935,0.234282829985426,0,0,0,0,0,0.521301686808497,0,0,0,0,0.213455115606889,0,0,0.30239029332968,0,0.306923946576125,0.280660094433074,0.512556597022804,1.02341449813341,0,0,0.462629081407967,0,0.410635780069046,0,0.348631135379878,0.241718899183244,0.601519410909855,0.0920809889358963,0.229628896329213,0.546273504020151,0,0,0.15403067420883,0,0,0,0,0.170093705276516,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0.082509499920588,0,0,1.6068392984416,0.096670718292122,0.154048617114644,0.15350367472613,0,0.107420244868274,0.580066775656914,0.0852266274161009,0.178064071293475,0.661139661443912,0.192190067365106,0.382838137483752,0.10115778085555,0,0,0,0.308033580176089,0,0,0,0.429374660225974,0,0,0,0,0,0,0,0.359744915166629,0,0.589062011728432,0,0,0,0,0.487426979262569,0,0.136499911407986,0.282810863907425,0,0,0.66343897524122,0.438450885253763,0.578775534266688,0,0.202910376962704,0.30982349809975,0,0.286822704408103,0.0982490410131212,0,0.354761064070598,0,0,0.379473173765715,0,0.192444225451024,0,0,0.188287601553558,0.43050537267123,0,0,0.459446800413919,0,0.764637207142375,0,0.476463550915578,0.822724546172388,0,0,0,0,0,0.245040215981032,0.371606350251437,0,0.355709216742071,0,0,0,0.211673582723883,0,0,0,0.156679895773023,0,0,0,0,0.425846237690326,0.343505344755765,0,0,0.166849141711909,0.19538809540204,0,0,0.270455678475983,0,0,0,0,0,0.222886768554957,0.284136146806413,0.23874448473769,0.296964680832639,0,1.9882952955326,0.562677665642051,0.333926115068718,0.329607748453519,0,0.398495976502139,0.276283915531148,1.0077309914171,0.20453736500431,0.369254416383208,0,0.269605053441981,0.179021174675609,0,0,0,1.11136990144637,0,1.02044907978036,0,0,0,0,0.227586896570999,0,1.18193840883968,0.344743373241465,0.583209226766509,0,0,0.482385754501632,1.52581736317083,0.552896299656123,0.886642856860642,0.219385397153973,0.10893846351899,0.139423744278603,0.307801034015188,0.455768223388005,0,0.269272933229316,0,0.31900115973192,0.274792780205587,0.533034776018635,1.02193298195737,0,0,0,0,0,0,0.158936578980379,0.210998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| |||
|short_description=p3@ARL6 | |||
}} |
Revision as of 20:02, 21 January 2014
Short description: | p3@ARL6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ARL6_5end |
Coexpression cluster: | NA |
Association with transcript: | 53bp_to_ENST00000462412_5end |
EntrezGene: | ARL6 |
HGNC: | 13210 |
UniProt: | C9IZ13 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 1.36e-07 | 1 |
seminiferous tubule epithelial cell | 1.36e-07 | 1 |
Sertoli cell | 1.36e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
pineal body | 2.33e-12 | 2 |
regional part of epithalamus | 2.33e-12 | 2 |
secretory circumventricular organ | 2.33e-12 | 2 |
circumventricular organ | 2.33e-12 | 2 |
epithalamus | 2.33e-12 | 2 |
mesothelium | 1.36e-07 | 1 |
seminiferous tubule of testis | 1.36e-07 | 1 |
epithelium of male gonad | 1.36e-07 | 1 |
epithelial cord | 1.36e-07 | 1 |
sex cord | 1.36e-07 | 1 |
seminiferous tubule epithelium | 1.36e-07 | 1 |
testis sex cord | 1.36e-07 | 1 |
genital ridge | 1.36e-07 | 1 |
primitive sex cord of indifferent gonad | 1.36e-07 | 1 |
coelomic epithelium | 1.36e-07 | 1 |
cranial nerve II | 1.63e-07 | 1 |
cranial nerve | 1.63e-07 | 1 |
nerve trunk | 1.63e-07 | 1 |
nerve connecting eye with brain | 1.63e-07 | 1 |
nerve | 1.63e-07 | 1 |
retinal neural layer | 1.63e-07 | 1 |
presumptive neural retina | 1.63e-07 | 1 |
stroma of bone marrow | 3.41e-07 | 1 |