FFCP PHASE1:Hg19::chr4:186661365..186661384,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8470 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24098 | |||
|TSSclassifier=weak | |||
|UniProt=C9IZT7 | |||
|association_with_transcript=99bp_to_ENST00000452351_5end | |||
|coexpression_cluster_id=C275 | |||
|description=CAGE_peak_46_at_SORBS2_5end | |||
|id=chr4:186661365..186661384,- | |||
|ontology_enrichment_celltype=CL:0002601!1.88e-08!1 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000200!2.48e-18!6;UBERON:0007023!6.94e-18!115;UBERON:0001049!1.00e-17!57;UBERON:0005068!1.00e-17!57;UBERON:0006241!1.00e-17!57;UBERON:0007135!1.00e-17!57;UBERON:0003075!4.07e-17!86;UBERON:0007284!4.07e-17!86;UBERON:0002616!4.71e-17!59;UBERON:0002346!3.15e-16!90;UBERON:0000153!2.41e-15!129;UBERON:0007811!2.41e-15!129;UBERON:0002298!1.51e-14!8;UBERON:0001893!1.87e-14!34;UBERON:0000955!4.94e-14!69;UBERON:0006238!4.94e-14!69;UBERON:0001017!2.08e-13!82;UBERON:0005743!1.12e-12!86;UBERON:0000033!1.17e-12!123;UBERON:0001869!3.27e-12!32;UBERON:0002780!8.15e-12!41;UBERON:0001890!8.15e-12!41;UBERON:0006240!8.15e-12!41;UBERON:0002791!9.96e-12!33;UBERON:0003080!1.65e-11!42;UBERON:0002020!2.15e-11!34;UBERON:0003528!2.15e-11!34;UBERON:0001950!2.91e-11!20;UBERON:0000073!2.97e-11!94;UBERON:0001016!2.97e-11!94;UBERON:0001896!1.48e-10!3;UBERON:0005290!1.48e-10!3;UBERON:0010096!1.48e-10!3;UBERON:0000988!1.70e-10!3;UBERON:0002619!3.07e-10!22;UBERON:0002771!6.81e-10!3;UBERON:0004733!9.60e-10!12;UBERON:0002028!9.60e-10!12;UBERON:0007277!9.60e-10!12;UBERON:0000477!1.65e-09!286;UBERON:0004121!1.73e-09!169;UBERON:0003056!2.46e-09!61;UBERON:0000924!3.42e-09!173;UBERON:0006601!3.42e-09!173;UBERON:0004732!5.30e-09!13;UBERON:0000956!5.35e-09!25;UBERON:0000203!5.35e-09!25;UBERON:0007190!1.52e-08!1;UBERON:0001736!1.63e-08!1;UBERON:0006298!1.63e-08!1;UBERON:0002022!2.33e-08!1;UBERON:0002135!2.69e-08!1;UBERON:0002902!3.33e-08!1;UBERON:0009899!3.33e-08!1;UBERON:0003112!3.83e-08!1;UBERON:0000032!3.83e-08!1;UBERON:0005253!3.83e-08!1;UBERON:0003128!3.83e-08!1;UBERON:0002241!3.83e-08!1;UBERON:0001703!3.83e-08!1;UBERON:0004761!3.83e-08!1;UBERON:0009617!3.83e-08!1;UBERON:0002336!4.11e-08!1;UBERON:0001018!4.11e-08!1;UBERON:0002473!4.11e-08!1;UBERON:0005340!4.11e-08!1;UBERON:0002316!4.11e-08!1;UBERON:0003544!4.11e-08!1;UBERON:0001020!4.11e-08!1;UBERON:0005970!4.11e-08!1;UBERON:0002437!4.11e-08!1;UBERON:0001882!4.41e-08!1;UBERON:0005403!4.41e-08!1;UBERON:0000025!4.63e-08!194;UBERON:0002581!6.24e-08!1;UBERON:0002363!6.68e-08!1;UBERON:0007647!6.68e-08!1;UBERON:0010115!6.68e-08!1;UBERON:0003076!8.19e-08!15;UBERON:0003057!8.19e-08!15;UBERON:0004111!1.15e-07!241;UBERON:0000483!1.71e-07!309;UBERON:0000119!2.22e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0000988;2.39e-66;3!UBERON:0002298;4.27e-34;6!UBERON:0002680;2.62e-23;9!UBERON:0001895;2.62e-23;9!UBERON:0004733;6.76e-18;12!UBERON:0002028;6.76e-18;12!UBERON:0004732;1.21e-16;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000988,2.39e-66,3;UBERON:0002298,4.27e-34,6;UBERON:0002680,2.62e-23,9;UBERON:0001895,2.62e-23,9;UBERON:0010092,2.62e-23,9;UBERON:0004733,6.76e-18,12;UBERON:0002028,6.76e-18,12;UBERON:0007277,6.76e-18,12;UBERON:0004732,1.21e-16,13;UBERON:0003076,1.22e-14,15;UBERON:0003057,1.22e-14,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.53746777989381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303747783290123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0.887432412294818,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0.207471757392654,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472763092328763,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,11.9626730039224,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476128862927481,0,0.0620747142958579,0,0,0.202117188958219,0,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p46@SORBS2 | |||
}} |
Revision as of 04:20, 22 January 2014
Short description: | p46@SORBS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_46_at_SORBS2_5end |
Coexpression cluster: | C275_pons_medulla_cerebellum_locus_thalamus_diencephalon_spinal |
Association with transcript: | 99bp_to_ENST00000452351_5end |
EntrezGene: | SORBS2 |
HGNC: | 24098 |
UniProt: | C9IZT7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pons | 2.39e-66 | 3 |
brainstem | 4.27e-34 | 6 |
regional part of metencephalon | 2.62e-23 | 9 |
metencephalon | 2.62e-23 | 9 |
future metencephalon | 2.62e-23 | 9 |
segmental subdivision of hindbrain | 6.76e-18 | 12 |
hindbrain | 6.76e-18 | 12 |
presumptive hindbrain | 6.76e-18 | 12 |
segmental subdivision of nervous system | 1.21e-16 | 13 |
posterior neural tube | 1.22e-14 | 15 |
chordal neural plate | 1.22e-14 | 15 |