FFCP PHASE1:Mm9::chr15:36723953..36723964,-: Difference between revisions
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{{FFCP|EntrezGene=22631|HGNC=|UniProt=P63101|association_with_transcript=321bp_to_ENSMUST00000110361_5end|description=CAGE_peak_6_at_Ywhaz_5end|id=chr15:36723953..36723964,-|ontology_enrichment_celltype=CL:0000055!1.86e-11!50;CL:0000393!1.03e-10!39;CL:0000211!1.03e-10!39;CL:0002319!1.42e-10!43;CL:0002321!2.93e-10!70;CL:0000220!2.93e-10!70;CL:0000221!5.69e-10!44;CL:0000133!5.69e-10!44;CL:0000540!5.84e-09!33;CL:0000047!5.84e-09!33;CL:0000031!5.84e-09!33;CL:0000404!5.84e-09!33|ontology_enrichment_celltype_v019_2=CL:0000393,6.75e-11,39;CL:0000211,6.75e-11,39;CL:0002321,7.63e-11,70;CL:0002319,9.36e-11,43;CL:0000221,5.16e-10,44;CL:0000133,5.16e-10,44;CL:0000540,4.14e-09,33;CL:0000047,4.14e-09,33;CL:0000031,4.14e-09,33;CL:0000404,4.14e-09,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!3.60e-18!75;UBERON:0001016!3.60e-18!75;UBERON:0001017!7.68e-18!73;UBERON:0005743!7.68e-18!73;UBERON:0004121!1.15e-16!102;UBERON:0000924!1.15e-16!102;UBERON:0006601!1.15e-16!102;UBERON:0002020!2.07e-12!34;UBERON:0002346!2.73e-12!71;UBERON:0003075!2.73e-12!71;UBERON:0007284!2.73e-12!71;UBERON:0001049!2.69e-11!52;UBERON:0005068!2.69e-11!52;UBERON:0006241!2.69e-11!52;UBERON:0007135!2.69e-11!52;UBERON:0000955!1.30e-10!50;UBERON:0006238!1.30e-10!50;UBERON:0002616!3.61e-10!49;UBERON:0002791!4.89e-10!29;UBERON:0003528!4.89e-10!29;UBERON:0001893!4.89e-10!29;UBERON:0000033!6.46e-10!63;UBERON:0000956!1.80e-09!21;UBERON:0001869!1.80e-09!21;UBERON:0000203!1.80e-09!21;UBERON:0002619!8.32e-09!17;UBERON:0002780!1.12e-08!39;UBERON:0001890!1.12e-08!39;UBERON:0006240!1.12e-08!39;UBERON:0003080!2.28e-08!40;UBERON:0003056!2.38e-08!49;UBERON:0002021!3.76e-08!10;UBERON:0000411!3.76e-08!10;UBERON:0001950!3.76e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.67e-18,75;UBERON:0001017,3.61e-18,73;UBERON:0004121,1.43e-16,95;UBERON:0000924,1.43e-16,95;UBERON:0006601,1.43e-16,95;UBERON:0002346,1.22e-12,64;UBERON:0003075,1.22e-12,64;UBERON:0007284,1.22e-12,64;UBERON:0002020,1.25e-12,34;UBERON:0000073,1.26e-12,54;UBERON:0010314,7.19e-12,92;UBERON:0001049,1.71e-11,52;UBERON:0005068,1.71e-11,52;UBERON:0006241,1.71e-11,52;UBERON:0007135,1.71e-11,52;UBERON:0010371,2.53e-10,73;UBERON:0003528,3.30e-10,29;UBERON:0002791,3.30e-10,29;UBERON:0001893,3.30e-10,29;UBERON:0000955,5.97e-10,47;UBERON:0006238,5.97e-10,47;UBERON:0000956,1.25e-09,21;UBERON:0001869,1.25e-09,21;UBERON:0000203,1.25e-09,21;UBERON:0002616,1.66e-09,46;UBERON:0002619,5.94e-09,17;UBERON:0002780,8.05e-09,39;UBERON:0001890,8.05e-09,39;UBERON:0006240,8.05e-09,39;UBERON:0003056,1.34e-08,49;UBERON:0003080,1.66e-08,40;UBERON:0002021,2.77e-08,10;UBERON:0000411,2.77e-08,10;UBERON:0001950,2.77e-08,10|phase1_expression=1.76163731815273,6.63053274514786,6.3699893514535,2.72217790176147,2.50447864973174,2.35030980676646,2.10251376535973,0.903863264091034,1.12630977721333,0.70219357896598,0,0.239316476986009,1.19840510951844,0.786783621770977,0.333109761815663,0.404950534779652,0,1.10411757875383,0.822686601634433,0,3.31668831589172,2.18440092641948,1.30599894569468,3.99981056983517,4.35877634027623,5.7423196411502,6.8921919385452,6.03319451520489,3.6104449696711,3.02436155711917,4.8780712344167,0,0,0,0,0.166234645358492,0.612508068787107,0.418531630736908,0,0,0.588231488031014,0,0.485510353031154,4.65818226509636,3.75094645512204,3.48738829107195,1.56478268869608,4.57852828398938,3.07560655828261,5.44403717407994,2.93971485413261,2.87505128729943,1.67782606057736,0.725362142011344,3.36093799142464,4.11615097657515,2.29226751951005,2.57836046138721,3.84401275633236,8.46385566835253,2.53532561402472,1.0165335962074,0,0.449949858640699,0.988866362566974,0,1.79760066311043,2.68952813725088,3.21437798156281,2.56511282830212,1.89292465216244,5.99867067247988,6.40518768759679,1.5923803897944,2.01275489138296,1.83843757322004,2.20231761998777,4.34136949489638,3.99376986466233,4.74790635828698,8.14240028061446,2.08365348222704,1.3959149950069,2.25105044012672,3.51435969886663,5.59794312399969,7.26095572075425,2.79599168737951,2.19605960666234,2.87171928405785,1.73918693221007,0,3.39985666853875,1.61910957491345,0.649776417447669,2.24013443548668,0.561777680527007,3.2381761289831,3.37721805983729,4.24007489412408,0.845060518660083,0,0,7.11066703153331,2.38140145112336,3.29367825117628,4.04419556011827,2.16949371466214,0.517875767294343,1.92974780784272,1.90833859442749,2.43572382649713,2.7673859670727,1.95939432718409,1.99900802130698,1.50799909595611,5.6854842578906,1.73519228303894,0,1.29413479957927,0.220841518460394,0.969750506270444,1.86391761218122,4.68449275218475,3.35114730901528,2.55457055208591,3.35482348616577,2.39961092397363,2.41433431438823,1.3481157546434,1.37250180845588,3.14135880282161,9.21268897019065,6.39288643325826,3.1168206683934,5.19172041816825,1.32391173005411,0.622034853050465,2.0217820674694,0.210441855886474,1.95180664444056,2.75882525320168,2.16074555766419,2.10986744970001,2.10913147369116,2.94661556655154,2.52994656311268,2.587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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:22631 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P63101 | |||
|association_with_transcript=321bp_to_ENSMUST00000110361_5end | |||
|cluster_id=chr15:36723953..36723964,- | |||
|description=CAGE_peak_6_at_Ywhaz_5end | |||
|id=chr15:36723953..36723964,- | |||
|ontology_enrichment_celltype=CL:0000055!1.86e-11!50;CL:0000393!1.03e-10!39;CL:0000211!1.03e-10!39;CL:0002319!1.42e-10!43;CL:0002321!2.93e-10!70;CL:0000220!2.93e-10!70;CL:0000221!5.69e-10!44;CL:0000133!5.69e-10!44;CL:0000540!5.84e-09!33;CL:0000047!5.84e-09!33;CL:0000031!5.84e-09!33;CL:0000404!5.84e-09!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,6.75e-11,39;CL:0000211,6.75e-11,39;CL:0002321,7.63e-11,70;CL:0002319,9.36e-11,43;CL:0000221,5.16e-10,44;CL:0000133,5.16e-10,44;CL:0000540,4.14e-09,33;CL:0000047,4.14e-09,33;CL:0000031,4.14e-09,33;CL:0000404,4.14e-09,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.60e-18!75;UBERON:0001016!3.60e-18!75;UBERON:0001017!7.68e-18!73;UBERON:0005743!7.68e-18!73;UBERON:0004121!1.15e-16!102;UBERON:0000924!1.15e-16!102;UBERON:0006601!1.15e-16!102;UBERON:0002020!2.07e-12!34;UBERON:0002346!2.73e-12!71;UBERON:0003075!2.73e-12!71;UBERON:0007284!2.73e-12!71;UBERON:0001049!2.69e-11!52;UBERON:0005068!2.69e-11!52;UBERON:0006241!2.69e-11!52;UBERON:0007135!2.69e-11!52;UBERON:0000955!1.30e-10!50;UBERON:0006238!1.30e-10!50;UBERON:0002616!3.61e-10!49;UBERON:0002791!4.89e-10!29;UBERON:0003528!4.89e-10!29;UBERON:0001893!4.89e-10!29;UBERON:0000033!6.46e-10!63;UBERON:0000956!1.80e-09!21;UBERON:0001869!1.80e-09!21;UBERON:0000203!1.80e-09!21;UBERON:0002619!8.32e-09!17;UBERON:0002780!1.12e-08!39;UBERON:0001890!1.12e-08!39;UBERON:0006240!1.12e-08!39;UBERON:0003080!2.28e-08!40;UBERON:0003056!2.38e-08!49;UBERON:0002021!3.76e-08!10;UBERON:0000411!3.76e-08!10;UBERON:0001950!3.76e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.67e-18,75;UBERON:0001017,3.61e-18,73;UBERON:0004121,1.43e-16,95;UBERON:0000924,1.43e-16,95;UBERON:0006601,1.43e-16,95;UBERON:0002346,1.22e-12,64;UBERON:0003075,1.22e-12,64;UBERON:0007284,1.22e-12,64;UBERON:0002020,1.25e-12,34;UBERON:0000073,1.26e-12,54;UBERON:0010314,7.19e-12,92;UBERON:0001049,1.71e-11,52;UBERON:0005068,1.71e-11,52;UBERON:0006241,1.71e-11,52;UBERON:0007135,1.71e-11,52;UBERON:0010371,2.53e-10,73;UBERON:0003528,3.30e-10,29;UBERON:0002791,3.30e-10,29;UBERON:0001893,3.30e-10,29;UBERON:0000955,5.97e-10,47;UBERON:0006238,5.97e-10,47;UBERON:0000956,1.25e-09,21;UBERON:0001869,1.25e-09,21;UBERON:0000203,1.25e-09,21;UBERON:0002616,1.66e-09,46;UBERON:0002619,5.94e-09,17;UBERON:0002780,8.05e-09,39;UBERON:0001890,8.05e-09,39;UBERON:0006240,8.05e-09,39;UBERON:0003056,1.34e-08,49;UBERON:0003080,1.66e-08,40;UBERON:0002021,2.77e-08,10;UBERON:0000411,2.77e-08,10;UBERON:0001950,2.77e-08,10 | |||
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| |||
|short_description=p6@Ywhaz | |||
}} |
Revision as of 05:25, 5 August 2015
Short description: | p6@Ywhaz |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Ywhaz_5end |
Coexpression cluster: | NA |
Association with transcript: | 321bp_to_ENSMUST00000110361_5end |
EntrezGene: | 22631 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 6.75e-11 | 39 |
electrically active cell | 6.75e-11 | 39 |
embryonic cell | 7.63e-11 | 70 |
neural cell | 9.36e-11 | 43 |
ectodermal cell | 5.16e-10 | 44 |
neurectodermal cell | 5.16e-10 | 44 |
neuron | 4.14e-09 | 33 |
neuronal stem cell | 4.14e-09 | 33 |
neuroblast | 4.14e-09 | 33 |
electrically signaling cell | 4.14e-09 | 33 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.67e-18 | 75 |
central nervous system | 3.61e-18 | 73 |
ectoderm-derived structure | 1.43e-16 | 95 |
ectoderm | 1.43e-16 | 95 |
presumptive ectoderm | 1.43e-16 | 95 |
neurectoderm | 1.22e-12 | 64 |
neural plate | 1.22e-12 | 64 |
presumptive neural plate | 1.22e-12 | 64 |
gray matter | 1.25e-12 | 34 |
regional part of nervous system | 1.26e-12 | 54 |
structure with developmental contribution from neural crest | 7.19e-12 | 92 |
neural tube | 1.71e-11 | 52 |
neural rod | 1.71e-11 | 52 |
future spinal cord | 1.71e-11 | 52 |
neural keel | 1.71e-11 | 52 |
ecto-epithelium | 2.53e-10 | 73 |
brain grey matter | 3.30e-10 | 29 |
regional part of telencephalon | 3.30e-10 | 29 |
telencephalon | 3.30e-10 | 29 |
brain | 5.97e-10 | 47 |
future brain | 5.97e-10 | 47 |
cerebral cortex | 1.25e-09 | 21 |
cerebral hemisphere | 1.25e-09 | 21 |
pallium | 1.25e-09 | 21 |
regional part of brain | 1.66e-09 | 46 |
regional part of cerebral cortex | 5.94e-09 | 17 |
regional part of forebrain | 8.05e-09 | 39 |
forebrain | 8.05e-09 | 39 |
future forebrain | 8.05e-09 | 39 |
pre-chordal neural plate | 1.34e-08 | 49 |
anterior neural tube | 1.66e-08 | 40 |
occipital lobe | 2.77e-08 | 10 |
visual cortex | 2.77e-08 | 10 |
neocortex | 2.77e-08 | 10 |