FFCP PHASE1:Mm9::chr15:79377009..79377018,-: Difference between revisions
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{{FFCP|EntrezGene=67040|HGNC=|UniProt=Q501J6|association_with_transcript=-20bp_to_NM_199079_5end|description=CAGE_peak_2_at_Ddx17_5end|id=chr15:79377009..79377018,-|ontology_enrichment_celltype=CL:0000393!2.24e-11!39;CL:0000211!2.24e-11!39;CL:0000540!2.84e-10!33;CL:0000047!2.84e-10!33;CL:0000031!2.84e-10!33;CL:0000404!2.84e-10!33;CL:0000117!1.06e-07!23;CL:0000337!1.06e-07!23;CL:0000055!5.25e-07!50|ontology_enrichment_celltype_v019_2=CL:0000393,2.24e-11,39;CL:0000211,2.24e-11,39;CL:0000540,2.84e-10,33;CL:0000047,2.84e-10,33;CL:0000031,2.84e-10,33;CL:0000404,2.84e-10,33;CL:0000117,1.06e-07,23;CL:0000337,1.06e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!9.38e-15!73;UBERON:0005743!9.38e-15!73;UBERON:0000073!1.29e-14!75;UBERON:0001016!1.29e-14!75;UBERON:0000033!6.40e-14!63;UBERON:0007811!4.90e-13!86;UBERON:0004121!5.62e-13!102;UBERON:0000924!5.62e-13!102;UBERON:0006601!5.62e-13!102;UBERON:0000955!1.82e-12!50;UBERON:0006238!1.82e-12!50;UBERON:0000153!2.54e-12!94;UBERON:0002616!7.35e-12!49;UBERON:0003056!1.26e-11!49;UBERON:0002346!2.93e-11!71;UBERON:0003075!2.93e-11!71;UBERON:0007284!2.93e-11!71;UBERON:0001049!3.25e-11!52;UBERON:0005068!3.25e-11!52;UBERON:0006241!3.25e-11!52;UBERON:0007135!3.25e-11!52;UBERON:0003080!1.70e-10!40;UBERON:0002780!5.32e-10!39;UBERON:0001890!5.32e-10!39;UBERON:0006240!5.32e-10!39;UBERON:0002791!4.55e-09!29;UBERON:0003528!4.55e-09!29;UBERON:0001893!4.55e-09!29;UBERON:0002020!8.19e-09!34|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.38e-15,73;UBERON:0001016,1.29e-14,75;UBERON:0004121,1.79e-14,95;UBERON:0000924,1.79e-14,95;UBERON:0006601,1.79e-14,95;UBERON:0002346,4.05e-13,64;UBERON:0003075,4.05e-13,64;UBERON:0007284,4.05e-13,64;UBERON:0010371,2.14e-12,73;UBERON:0000073,8.78e-12,54;UBERON:0003056,1.26e-11,49;UBERON:0000955,1.36e-11,47;UBERON:0006238,1.36e-11,47;UBERON:0001049,3.25e-11,52;UBERON:0005068,3.25e-11,52;UBERON:0006241,3.25e-11,52;UBERON:0007135,3.25e-11,52;UBERON:0002616,5.35e-11,46;UBERON:0003080,1.70e-10,40;UBERON:0002780,5.32e-10,39;UBERON:0001890,5.32e-10,39;UBERON:0006240,5.32e-10,39;UBERON:0003528,4.55e-09,29;UBERON:0002791,4.55e-09,29;UBERON:0001893,4.55e-09,29;UBERON:0002020,8.19e-09,34;UBERON:0010314,9.70e-09,92|phase1_expression=8.64803774365887,5.23463111459042,5.0049916332849,5.74682001482977,4.00716583957078,7.72244650794693,5.37309073369709,4.77756296733832,1.267098499365,0.468129052643987,2.91070545983358,3.74929147278081,5.30722262786738,4.80812213304486,2.33176833270964,2.22722794128809,4.89693314689703,4.41647031501533,6.17014951225825,4.66828616977833,7.82398269389842,4.46809280403984,3.6567970479451,2.87986361028132,4.35877634027623,8.03924749761028,5.59990595006797,5.817723282519,2.66032787238923,4.28451220591882,3.54768817048488,3.81018404075779,2.46025915033828,15.8481681015439,4.62162591602039,2.82598897109437,6.12508068787107,5.02237956884289,2.3440060335714,4.18818995179039,7.64700934440319,4.09827290975067,6.311634589405,9.56815816614387,11.9624778839027,14.3166466686112,7.82391344348039,2.39827672018491,5.71184075109627,3.4997381833371,2.2397827460058,5.75010257459886,4.19456515144341,1.45072428402269,4.7053131879945,6.43148590089868,2.86533439938757,9.7977697532714,13.3528864167335,8.46385566835253,12.0427966666174,6.43804610931351,2.66788438833342,4.49949858640699,1.97773272513395,2.1314403448383,3.59520132622086,3.45796474789399,12.2353742524004,8.23536223823313,13.0401476037857,7.42692559449889,4.19650227808066,12.8615339175702,11.5973019932066,9.19218786610021,9.91042928994498,8.42736431362239,7.21950706304344,16.4857859662742,8.59983849862651,9.37644067002168,6.42120897703176,6.19038871034848,9.93188610549266,5.89257170947335,6.12198227436143,10.6247684120421,7.72407171998477,4.83657984683427,3.76823835312181,3.44169550792555,3.39985666853875,3.77792234146472,4.54843492213368,5.37632264516803,1.82577746171277,4.09032774187339,6.75443611967459,3.18005617059306,7.04217098883402,10.2661181931454,5.09610479413291,7.11066703153331,5.62876706629157,4.05375784760158,5.56076889516262,2.74041311325744,4.91981978929626,5.64080128446334,5.55153045651635,2.13125834818499,4.15107895060905,5.42601505989441,4.23319345688537,9.04799457573663,3.46072954828123,4.77177877835708,6.19227386364912,5.3383060482645,6.40440403535141,5.81850303762267,1.86391761218122,7.90508151931177,9.00620839297857,4.08731288333746,2.15667224110656,0.599902730993408,2.66847476853436,10.4853447583376,10.980014467647,10.3036568732549,8.8650403298061,13.2972037811772,10.5971902725376,12.1680947300818,6.61955865027056,6.22034853050465,7.32895999457657,4.8401626853889,5.46505860443356,6.89706313300419,7.38254732201932,7.38453607395004,9.18492738542926,10.1209839025031,10.026084527891,7.50239775143145,5.17363183038821,10.5899404893979,7.2139960907219,7.23345917010997,6.39508673218875,3.83077383174383,3.49829631893504,9.35461054046918,1.40442637462647,1.02939162845886,0.852490498186778,3.93538967817454,6.56672967947069,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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:67040 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q501J6 | |||
|association_with_transcript=-20bp_to_NM_199079_5end | |||
|cluster_id=chr15:79377009..79377018,- | |||
|description=CAGE_peak_2_at_Ddx17_5end | |||
|id=chr15:79377009..79377018,- | |||
|ontology_enrichment_celltype=CL:0000393!2.24e-11!39;CL:0000211!2.24e-11!39;CL:0000540!2.84e-10!33;CL:0000047!2.84e-10!33;CL:0000031!2.84e-10!33;CL:0000404!2.84e-10!33;CL:0000117!1.06e-07!23;CL:0000337!1.06e-07!23;CL:0000055!5.25e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,2.24e-11,39;CL:0000211,2.24e-11,39;CL:0000540,2.84e-10,33;CL:0000047,2.84e-10,33;CL:0000031,2.84e-10,33;CL:0000404,2.84e-10,33;CL:0000117,1.06e-07,23;CL:0000337,1.06e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!9.38e-15!73;UBERON:0005743!9.38e-15!73;UBERON:0000073!1.29e-14!75;UBERON:0001016!1.29e-14!75;UBERON:0000033!6.40e-14!63;UBERON:0007811!4.90e-13!86;UBERON:0004121!5.62e-13!102;UBERON:0000924!5.62e-13!102;UBERON:0006601!5.62e-13!102;UBERON:0000955!1.82e-12!50;UBERON:0006238!1.82e-12!50;UBERON:0000153!2.54e-12!94;UBERON:0002616!7.35e-12!49;UBERON:0003056!1.26e-11!49;UBERON:0002346!2.93e-11!71;UBERON:0003075!2.93e-11!71;UBERON:0007284!2.93e-11!71;UBERON:0001049!3.25e-11!52;UBERON:0005068!3.25e-11!52;UBERON:0006241!3.25e-11!52;UBERON:0007135!3.25e-11!52;UBERON:0003080!1.70e-10!40;UBERON:0002780!5.32e-10!39;UBERON:0001890!5.32e-10!39;UBERON:0006240!5.32e-10!39;UBERON:0002791!4.55e-09!29;UBERON:0003528!4.55e-09!29;UBERON:0001893!4.55e-09!29;UBERON:0002020!8.19e-09!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.38e-15,73;UBERON:0001016,1.29e-14,75;UBERON:0004121,1.79e-14,95;UBERON:0000924,1.79e-14,95;UBERON:0006601,1.79e-14,95;UBERON:0002346,4.05e-13,64;UBERON:0003075,4.05e-13,64;UBERON:0007284,4.05e-13,64;UBERON:0010371,2.14e-12,73;UBERON:0000073,8.78e-12,54;UBERON:0003056,1.26e-11,49;UBERON:0000955,1.36e-11,47;UBERON:0006238,1.36e-11,47;UBERON:0001049,3.25e-11,52;UBERON:0005068,3.25e-11,52;UBERON:0006241,3.25e-11,52;UBERON:0007135,3.25e-11,52;UBERON:0002616,5.35e-11,46;UBERON:0003080,1.70e-10,40;UBERON:0002780,5.32e-10,39;UBERON:0001890,5.32e-10,39;UBERON:0006240,5.32e-10,39;UBERON:0003528,4.55e-09,29;UBERON:0002791,4.55e-09,29;UBERON:0001893,4.55e-09,29;UBERON:0002020,8.19e-09,34;UBERON:0010314,9.70e-09,92 | |||
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| |||
|short_description=p2@Ddx17 | |||
}} |
Revision as of 15:26, 5 August 2015
Short description: | p2@Ddx17 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ddx17_5end |
Coexpression cluster: | NA |
Association with transcript: | -20bp_to_NM_199079_5end |
EntrezGene: | 67040 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 2.24e-11 | 39 |
electrically active cell | 2.24e-11 | 39 |
neuron | 2.84e-10 | 33 |
neuronal stem cell | 2.84e-10 | 33 |
neuroblast | 2.84e-10 | 33 |
electrically signaling cell | 2.84e-10 | 33 |
CNS neuron (sensu Vertebrata) | 1.06e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.06e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 9.38e-15 | 73 |
nervous system | 1.29e-14 | 75 |
ectoderm-derived structure | 1.79e-14 | 95 |
ectoderm | 1.79e-14 | 95 |
presumptive ectoderm | 1.79e-14 | 95 |
neurectoderm | 4.05e-13 | 64 |
neural plate | 4.05e-13 | 64 |
presumptive neural plate | 4.05e-13 | 64 |
ecto-epithelium | 2.14e-12 | 73 |
regional part of nervous system | 8.78e-12 | 54 |
pre-chordal neural plate | 1.26e-11 | 49 |
brain | 1.36e-11 | 47 |
future brain | 1.36e-11 | 47 |
neural tube | 3.25e-11 | 52 |
neural rod | 3.25e-11 | 52 |
future spinal cord | 3.25e-11 | 52 |
neural keel | 3.25e-11 | 52 |
regional part of brain | 5.35e-11 | 46 |
anterior neural tube | 1.70e-10 | 40 |
regional part of forebrain | 5.32e-10 | 39 |
forebrain | 5.32e-10 | 39 |
future forebrain | 5.32e-10 | 39 |
brain grey matter | 4.55e-09 | 29 |
regional part of telencephalon | 4.55e-09 | 29 |
telencephalon | 4.55e-09 | 29 |
gray matter | 8.19e-09 | 34 |
structure with developmental contribution from neural crest | 9.70e-09 | 92 |