FFCP PHASE1:Mm9::chr16:14705668..14705683,+: Difference between revisions
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{{FFCP|EntrezGene=20583|HGNC=|MCL_coexpression_id=243|UniProt=P97469|association_with_transcript=-261bp_to_ENSMUST00000023356_5end|description=CAGE_peak_3_at_Snai2_5end|id=chr16:14705668..14705683,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002293,1.44e-16,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000926!1.52e-08!193;UBERON:0004120!1.52e-08!193;UBERON:0006603!1.52e-08!193;UBERON:0002048!1.55e-08!14;UBERON:0000117!1.55e-08!14;UBERON:0000171!1.55e-08!14;UBERON:0000170!1.55e-08!14;UBERON:0005597!1.55e-08!14;UBERON:0000118!1.55e-08!14;UBERON:0005178!1.72e-08!17;UBERON:0005181!1.72e-08!17;UBERON:0002224!1.72e-08!17;UBERON:0000915!1.72e-08!17;UBERON:0008947!1.72e-08!17;UBERON:0003258!1.72e-08!17;UBERON:0005153!2.52e-08!17|ontology_enrichment_uberon_v019_2=UBERON:0000310,3.68e-13,6;UBERON:0001443,3.68e-13,6;UBERON:0002048,1.37e-08,14;UBERON:0000117,1.37e-08,14;UBERON:0000171,1.37e-08,14;UBERON:0000170,1.37e-08,14;UBERON:0005597,1.37e-08,14;UBERON:0000118,1.37e-08,14;UBERON:0001004,1.75e-08,42;UBERON:0005153,4.81e-07,17;UBERON:0005178,4.81e-07,17;UBERON:0005181,4.81e-07,17;UBERON:0002224,4.81e-07,17;UBERON:0000915,4.81e-07,17;UBERON:0008947,4.81e-07,17;UBERON:0003258,4.81e-07,17;UBERON:0000065,6.79e-07,41|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00717454380462,0.608261587317087,0.367093504323363,0,0,0,0,0,0,0,0,0,0.514518872071894,0.286533439938757,0,0,0,0,0.338844532069132,0,0.449949858640699,0,0,0.299600110518405,0,0.103689612308478,0,0.210324961351382,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0.15279824777681,0,0.142371680799103,0,0,0.0755715601067855,0.869593466105033,0,0.679971333707751,0.539703191637817,0.649776417447669,0,0.140444420131752,8.52151612890289,7.01422212427746,5.3000936176551,0,19.2489716121477,30.5766287647975,7.11066703153331,0.432982082022428,0.506719730950197,0,0.34255163915718,0,0,0,0.304465478312141,0,0.150722640552623,0.470354828542819,0,0.247194967734374,1.01219549843938,1.76922110389975,0.161766849947409,0.441683036920787,1.45462575940567,0,0,0,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0.203678727700633,0.248813941220186,0,0,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0.258703370739016,0.431135985865684,0.189106080167819,0.703804496655795,0.876782929710299,0.834141747676794,0,0,0.59710280045548,0,0,0,0.207125772535502,0.703578179943289,0.36012412292203,0,0.393528463494808,0.154267112887378,0.465067889500816,0,0.116765342367169,0,0,0,0.146199987425332,0.658650345873152,0.134206418760372,0,0,0,0,0.853153002140936,0.696710015581316,0.257734922644187,0.403367049246685,0.22237804384487,0.190225626112559,0,0,0,0,0,0,0,0,0.379335801906163,0.114248512609729,1.1270773567308,0,0.193952487167626,0.350679099451593,0.126473074248515,0.147610147979602,0,0.123397163921801,0,0.500535317148282,0,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0,0,0,0.179397413521912,0,0.184753190166605,1.13694847062291,1.95557971730431,1.01847051465113,1.17345124144251,0.837531287209079,0.238043640886014,0.975668239288994,0.630540576424764,0.8858587585951,1.43509291791738,0.327726629431476,0.172684981865896,0.578596234326046,0,0,0,0.827810238914197,0,0.117211686592203,0.327869890753351,0.504941854408746,0,0.390438744296638,0,0,0,0,0,0,0.395287777946524,0,0.567760340833074,0.178065603667255,0.325773918707152,0.494910368917606,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0,0,0.363533729477506,0,0,0,0,0,0,0,0.214337035031592,0,0,0.329098041204242,0,0,0,0.220528398054962,0.32977250588296,0.484393280087717,0.241251699712623,0,0.492422699235184,0,0,0,0.206386867963223,0.370389054739423,0,0.136694227721025,0,0,0,0,0,1.10717597753397,0.609958401380546,0.540026704109006,0.418176592028937,0.218362563746178,0.269728692769641,0.0826534557253359,0,0.129614973291793,1.24267862617385,0,0.897099276263873,0.165458490457098,0.777804753376191,0.387479470433193,0.168956125490778,0.234714477291508,0,0.419437377702843,0,0,0.316011120628178,0,0.308132871494482,0.25984164595559,0.358053391334963,0,0,0,0,0.15241361331,0.100826185136841,0.0974578807397524,0,0.233753804363138,0,0,0,0,0,0.750729901804728,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0.798049746802062,0.512200817262403,0.486213434136588,0.209613162627982,0.183843508450014,0,0.206035057238894,0,0.252697211763798,0,0,0.187283014939765,0.320125762024346,0.114870937911227,0.476293691283074,0.115884325944855,0,0.412085900803307,0.441596760403192,0.342869252385415,0,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0,0,0.118635018124174,0.0985044823755635,0,0,0.192906610981141,0.249810577937946,0,0.214871054048298,0.57386499620653,0.441182838239031,0.463735671240843|short_description=p3@Snai2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:20583 | |||
|HGNC= | |||
|MCL_coexpression_id=243 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P97469 | |||
|association_with_transcript=-261bp_to_ENSMUST00000023356_5end | |||
|cluster_id=chr16:14705668..14705683,+ | |||
|description=CAGE_peak_3_at_Snai2_5end | |||
|id=chr16:14705668..14705683,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002293,1.44e-16,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!1.52e-08!193;UBERON:0004120!1.52e-08!193;UBERON:0006603!1.52e-08!193;UBERON:0002048!1.55e-08!14;UBERON:0000117!1.55e-08!14;UBERON:0000171!1.55e-08!14;UBERON:0000170!1.55e-08!14;UBERON:0005597!1.55e-08!14;UBERON:0000118!1.55e-08!14;UBERON:0005178!1.72e-08!17;UBERON:0005181!1.72e-08!17;UBERON:0002224!1.72e-08!17;UBERON:0000915!1.72e-08!17;UBERON:0008947!1.72e-08!17;UBERON:0003258!1.72e-08!17;UBERON:0005153!2.52e-08!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,3.68e-13,6;UBERON:0001443,3.68e-13,6;UBERON:0002048,1.37e-08,14;UBERON:0000117,1.37e-08,14;UBERON:0000171,1.37e-08,14;UBERON:0000170,1.37e-08,14;UBERON:0005597,1.37e-08,14;UBERON:0000118,1.37e-08,14;UBERON:0001004,1.75e-08,42;UBERON:0005153,4.81e-07,17;UBERON:0005178,4.81e-07,17;UBERON:0005181,4.81e-07,17;UBERON:0002224,4.81e-07,17;UBERON:0000915,4.81e-07,17;UBERON:0008947,4.81e-07,17;UBERON:0003258,4.81e-07,17;UBERON:0000065,6.79e-07,41 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00717454380462,0.608261587317087,0.367093504323363,0,0,0,0,0,0,0,0,0,0.514518872071894,0.286533439938757,0,0,0,0,0.338844532069132,0,0.449949858640699,0,0,0.299600110518405,0,0.103689612308478,0,0.210324961351382,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0.15279824777681,0,0.142371680799103,0,0,0.0755715601067855,0.869593466105033,0,0.679971333707751,0.539703191637817,0.649776417447669,0,0.140444420131752,8.52151612890289,7.01422212427746,5.3000936176551,0,19.2489716121477,30.5766287647975,7.11066703153331,0.432982082022428,0.506719730950197,0,0.34255163915718,0,0,0,0.304465478312141,0,0.150722640552623,0.470354828542819,0,0.247194967734374,1.01219549843938,1.76922110389975,0.161766849947409,0.441683036920787,1.45462575940567,0,0,0,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0.203678727700633,0.248813941220186,0,0,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0.258703370739016,0.431135985865684,0.189106080167819,0.703804496655795,0.876782929710299,0.834141747676794,0,0,0.59710280045548,0,0,0,0.207125772535502,0.703578179943289,0.36012412292203,0,0.393528463494808,0.154267112887378,0.465067889500816,0,0.116765342367169,0,0,0,0.146199987425332,0.658650345873152,0.134206418760372,0,0,0,0,0.853153002140936,0.696710015581316,0.257734922644187,0.403367049246685,0.22237804384487,0.190225626112559,0,0,0,0,0,0,0,0,0.379335801906163,0.114248512609729,1.1270773567308,0,0.193952487167626,0.350679099451593,0.126473074248515,0.147610147979602,0,0.123397163921801,0,0.500535317148282,0,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0,0,0,0.179397413521912,0,0.184753190166605,1.13694847062291,1.95557971730431,1.01847051465113,1.17345124144251,0.837531287209079,0.238043640886014,0.975668239288994,0.630540576424764,0.8858587585951,1.43509291791738,0.327726629431476,0.172684981865896,0.578596234326046,0,0,0,0.827810238914197,0,0.117211686592203,0.327869890753351,0.504941854408746,0,0.390438744296638,0,0,0,0,0,0,0.395287777946524,0,0.567760340833074,0.178065603667255,0.325773918707152,0.494910368917606,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0,0,0.363533729477506,0,0,0,0,0,0,0,0.214337035031592,0,0,0.329098041204242,0,0,0,0.220528398054962,0.32977250588296,0.484393280087717,0.241251699712623,0,0.492422699235184,0,0,0,0.206386867963223,0.370389054739423,0,0.136694227721025,0,0,0,0,0,1.10717597753397,0.609958401380546,0.540026704109006,0.418176592028937,0.218362563746178,0.269728692769641,0.0826534557253359,0,0.129614973291793,1.24267862617385,0,0.897099276263873,0.165458490457098,0.777804753376191,0.387479470433193,0.168956125490778,0.234714477291508,0,0.419437377702843,0,0,0.316011120628178,0,0.308132871494482,0.25984164595559,0.358053391334963,0,0,0,0,0.15241361331,0.100826185136841,0.0974578807397524,0,0.233753804363138,0,0,0,0,0,0.750729901804728,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0.798049746802062,0.512200817262403,0.486213434136588,0.209613162627982,0.183843508450014,0,0.206035057238894,0,0.252697211763798,0,0,0.187283014939765,0.320125762024346,0.114870937911227,0.476293691283074,0.115884325944855,0,0.412085900803307,0.441596760403192,0.342869252385415,0,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0,0,0.118635018124174,0.0985044823755635,0,0,0.192906610981141,0.249810577937946,0,0.214871054048298,0.57386499620653,0.441182838239031,0.463735671240843 | |||
|short_description=p3@Snai2 | |||
}} |
Revision as of 01:51, 6 August 2015
Short description: | p3@Snai2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Snai2_5end |
Coexpression cluster: | MCL_coexpression_mm9:243 |
Association with transcript: | -261bp_to_ENSMUST00000023356_5end |
EntrezGene: | 20583 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of thymus | 1.44e-16 | 3 |
Ontology term | p-value | n |
---|---|---|
breast | 3.68e-13 | 6 |
chest | 3.68e-13 | 6 |
lung | 1.37e-08 | 14 |
respiratory tube | 1.37e-08 | 14 |
respiration organ | 1.37e-08 | 14 |
pair of lungs | 1.37e-08 | 14 |
lung primordium | 1.37e-08 | 14 |
lung bud | 1.37e-08 | 14 |
respiratory system | 1.75e-08 | 42 |
epithelial bud | 4.81e-07 | 17 |
thoracic cavity element | 4.81e-07 | 17 |
thoracic segment organ | 4.81e-07 | 17 |
thoracic cavity | 4.81e-07 | 17 |
thoracic segment of trunk | 4.81e-07 | 17 |
respiratory primordium | 4.81e-07 | 17 |
endoderm of foregut | 4.81e-07 | 17 |
respiratory tract | 6.79e-07 | 41 |