FFCP PHASE1:Hg19::chr4:95375884..95375900,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=10611 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17468 | |||
|TSSclassifier=not | |||
|UniProt=D6RB78 | |||
|association_with_transcript=-495bp_to_ENST00000508216,ENST00000514743_5end | |||
|coexpression_cluster_id=C56 | |||
|description=CAGE_peak_15_at_PDLIM5_5end | |||
|id=chr4:95375884..95375900,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000097;5.92e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,5.73e-08,5;CL:0002028,5.73e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0004140;1.84e-34;1!UBERON:0010227;7.05e-34;1!UBERON:0010226;7.05e-34;1!UBERON:0005062;1.57e-09;4!UBERON:0007284;1.57e-09;4 | |||
|ontology_enrichment_disease=DOID:4362!1.04e-08!5 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!2.03e-11!9;UBERON:0007100!1.80e-07!27;UBERON:0000002!2.90e-07!6;UBERON:0001560!2.90e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0004151;2.38e-44;3!UBERON:0002084;7.05e-34;1!UBERON:0002079;7.05e-34;1!UBERON:0002146;7.05e-34;1!UBERON:0002082;7.05e-34;1!UBERON:0005623;7.05e-34;1!UBERON:0007100;3.03e-33;25!UBERON:0000948;1.93e-24;22!UBERON:0002081;1.07e-17;2!UBERON:0003978;2.89e-12;3!UBERON:0000946;2.89e-12;3!UBERON:0003103;1.88e-08;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,2.38e-44,3;UBERON:0002084,5.05e-34,1;UBERON:0002082,5.05e-34,1;UBERON:0010226,5.05e-34,1;UBERON:0002146,7.06e-34,1;UBERON:0005623,7.06e-34,1;UBERON:0002079,9.85e-34,1;UBERON:0007100,8.03e-31,27;UBERON:0000948,1.82e-22,24;UBERON:0005498,1.82e-22,24;UBERON:0004140,1.82e-22,24;UBERON:0009881,1.82e-22,24;UBERON:0004141,1.82e-22,24;UBERON:0003084,1.82e-22,24;UBERON:0007005,1.82e-22,24;UBERON:0004139,1.82e-22,24;UBERON:0004291,1.82e-22,24;UBERON:0002081,1.27e-17,2;UBERON:0010227,1.27e-17,2;UBERON:0003103,1.39e-12,68;UBERON:0003978,2.89e-12,3;UBERON:0009751,2.89e-12,3;UBERON:0000946,2.89e-12,3;UBERON:0002523,2.89e-12,3;UBERON:0005983,2.89e-12,3;UBERON:0002165,2.89e-12,3;UBERON:0002062,2.89e-12,3;UBERON:0007280,2.89e-12,3;UBERON:0001009,8.45e-08,112;UBERON:0004872,6.74e-07,83 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300476117813194,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0.168584690078102,0.723033089650446,0.220587945464788,0,0,0.269662616320329,0.588664395376038,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.352226082707465,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,2.46331618947972,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196498082026242,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0.251932747854276,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0.508507300585533,0,0,0,0.173624994933292,0,0,0,0,0,0,0.10893846351899,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167821586975843,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.0870592065804026,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0.136905378891993,0,0,0,0.558564802544508,1.60412296808179,0,0,0.429226048136571,2.00854311697685,3.49354056930977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,1.42939065274673,1.98627591109629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.761610424337591,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0.179088841081487,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0.496211178389294,0,0.255524855279191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0.647428837187895,0.307988420568741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0.320182037633146,0,0,0,0.244482888365733,0,0,0,0 | |||
|short_description=p15@PDLIM5 | |||
}} |
Revision as of 02:19, 22 January 2014
Short description: | p15@PDLIM5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_15_at_PDLIM5_5end |
Coexpression cluster: | C56_heart_left_umbilical_skeletal_penis_diaphragm_tongue |
Association with transcript: | -495bp_to_ENST00000508216, ENST00000514743_5end |
EntrezGene: | PDLIM5 |
HGNC: | 17468 |
UniProt: | D6RB78 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 5.73e-08 | 5 |
basophil mast progenitor cell | 5.73e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
cardiac chamber | 2.38e-44 | 3 |
heart left ventricle | 5.05e-34 | 1 |
cardiac ventricle | 5.05e-34 | 1 |
future cardiac ventricle | 5.05e-34 | 1 |
pulmonary valve | 7.06e-34 | 1 |
semi-lunar valve | 7.06e-34 | 1 |
left cardiac atrium | 9.85e-34 | 1 |
primary circulatory organ | 8.03e-31 | 27 |
heart | 1.82e-22 | 24 |
primitive heart tube | 1.82e-22 | 24 |
primary heart field | 1.82e-22 | 24 |
anterior lateral plate mesoderm | 1.82e-22 | 24 |
heart tube | 1.82e-22 | 24 |
heart primordium | 1.82e-22 | 24 |
cardiac mesoderm | 1.82e-22 | 24 |
cardiogenic plate | 1.82e-22 | 24 |
heart rudiment | 1.82e-22 | 24 |
cardiac atrium | 1.27e-17 | 2 |
future cardiac atrium | 1.27e-17 | 2 |
compound organ | 1.39e-12 | 68 |
valve | 2.89e-12 | 3 |
cardiac mesenchyme | 2.89e-12 | 3 |
cardial valve | 2.89e-12 | 3 |
tunica intima | 2.89e-12 | 3 |
heart layer | 2.89e-12 | 3 |
endocardium | 2.89e-12 | 3 |
endocardial cushion | 2.89e-12 | 3 |
presumptive endocardium | 2.89e-12 | 3 |
circulatory system | 8.45e-08 | 112 |
splanchnic layer of lateral plate mesoderm | 6.74e-07 | 83 |