FFCP PHASE1:Hg19::chr5:109025067..109025146,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4124 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6824 | |||
|TSSclassifier=strong | |||
|UniProt=Q16706 | |||
|association_with_transcript=0bp_to_ENST00000261483_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_2_at_MAN2A1_5end | |||
|id=chr5:109025067..109025146,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.20e-18!57;UBERON:0005068!1.20e-18!57;UBERON:0006241!1.20e-18!57;UBERON:0007135!1.20e-18!57;UBERON:0007023!4.07e-18!115;UBERON:0002616!1.18e-17!59;UBERON:0000955!2.36e-17!69;UBERON:0006238!2.36e-17!69;UBERON:0005743!2.45e-17!86;UBERON:0003080!4.13e-17!42;UBERON:0001017!4.86e-17!82;UBERON:0002780!8.26e-17!41;UBERON:0001890!8.26e-17!41;UBERON:0006240!8.26e-17!41;UBERON:0002020!9.27e-17!34;UBERON:0003528!9.27e-17!34;UBERON:0001893!1.00e-16!34;UBERON:0002791!3.78e-16!33;UBERON:0001869!2.12e-15!32;UBERON:0000073!2.17e-15!94;UBERON:0001016!2.17e-15!94;UBERON:0002346!4.19e-14!90;UBERON:0003075!1.37e-13!86;UBERON:0007284!1.37e-13!86;UBERON:0003056!1.63e-13!61;UBERON:0000153!1.79e-13!129;UBERON:0007811!1.79e-13!129;UBERON:0000033!7.51e-13!123;UBERON:0000956!1.11e-11!25;UBERON:0000203!1.11e-11!25;UBERON:0002619!1.41e-11!22;UBERON:0001950!1.80e-10!20;UBERON:0000924!5.56e-08!173;UBERON:0006601!5.56e-08!173;UBERON:0004121!1.51e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.17e-14;34!UBERON:0003528;2.59e-14;34!UBERON:0002020;2.59e-14;34!UBERON:0002791;4.66e-14;32!UBERON:0001869;4.98e-14;32!UBERON:0002780;1.85e-12;41!UBERON:0001890;1.85e-12;41!UBERON:0000956;1.25e-11;25!UBERON:0000203;1.25e-11;25!UBERON:0002619;1.77e-11;22!UBERON:0001950;2.33e-10;20!UBERON:0000073;6.32e-10;53!UBERON:0002616;6.32e-10;53!UBERON:0001017;1.68e-08;75!UBERON:0000955;1.13e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.47e-18,56;UBERON:0005068,2.47e-18,56;UBERON:0006241,2.47e-18,56;UBERON:0007135,2.47e-18,56;UBERON:0007023,1.25e-17,114;UBERON:0000955,4.80e-17,68;UBERON:0006238,4.80e-17,68;UBERON:0002780,8.26e-17,41;UBERON:0001890,8.26e-17,41;UBERON:0003080,8.26e-17,41;UBERON:0006240,8.26e-17,41;UBERON:0003528,9.27e-17,34;UBERON:0002020,9.27e-17,34;UBERON:0001017,9.81e-17,81;UBERON:0001893,1.00e-16,34;UBERON:0000073,1.52e-16,53;UBERON:0002616,1.52e-16,53;UBERON:0002791,1.75e-15,32;UBERON:0001869,2.12e-15,32;UBERON:0002346,5.21e-15,86;UBERON:0001016,9.28e-15,89;UBERON:0003075,1.68e-14,82;UBERON:0007284,1.68e-14,82;UBERON:0003056,8.92e-14,61;UBERON:0000956,1.11e-11,25;UBERON:0000203,1.11e-11,25;UBERON:0002619,1.41e-11,22;UBERON:0001950,1.80e-10,20;UBERON:0010371,2.38e-09,104;UBERON:0004121,4.44e-08,171;UBERON:0000924,4.44e-08,171;UBERON:0006601,4.44e-08,171;UBERON:0010314,1.50e-07,132 | |||
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| |||
|short_description=p2@MAN2A1 | |||
}} |
Revision as of 06:50, 22 January 2014
Short description: | p2@MAN2A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MAN2A1_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000261483_5end |
EntrezGene: | MAN2A1 |
HGNC: | 6824 |
UniProt: | Q16706 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 2.47e-18 | 56 |
neural rod | 2.47e-18 | 56 |
future spinal cord | 2.47e-18 | 56 |
neural keel | 2.47e-18 | 56 |
adult organism | 1.25e-17 | 114 |
brain | 4.80e-17 | 68 |
future brain | 4.80e-17 | 68 |
regional part of forebrain | 8.26e-17 | 41 |
forebrain | 8.26e-17 | 41 |
anterior neural tube | 8.26e-17 | 41 |
future forebrain | 8.26e-17 | 41 |
brain grey matter | 9.27e-17 | 34 |
gray matter | 9.27e-17 | 34 |
central nervous system | 9.81e-17 | 81 |
telencephalon | 1.00e-16 | 34 |
regional part of nervous system | 1.52e-16 | 53 |
regional part of brain | 1.52e-16 | 53 |
regional part of telencephalon | 1.75e-15 | 32 |
cerebral hemisphere | 2.12e-15 | 32 |
neurectoderm | 5.21e-15 | 86 |
nervous system | 9.28e-15 | 89 |
neural plate | 1.68e-14 | 82 |
presumptive neural plate | 1.68e-14 | 82 |
pre-chordal neural plate | 8.92e-14 | 61 |
cerebral cortex | 1.11e-11 | 25 |
pallium | 1.11e-11 | 25 |
regional part of cerebral cortex | 1.41e-11 | 22 |
neocortex | 1.80e-10 | 20 |
ecto-epithelium | 2.38e-09 | 104 |
ectoderm-derived structure | 4.44e-08 | 171 |
ectoderm | 4.44e-08 | 171 |
presumptive ectoderm | 4.44e-08 | 171 |
structure with developmental contribution from neural crest | 1.50e-07 | 132 |