FFCP PHASE1:Mm9::chr17:35153463..35153491,+: Difference between revisions
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{{FFCP|EntrezGene=27762|HGNC=|MCL_coexpression_id=30|UniProt=Q9JHA8,B2RQ76,B9EJA5|association_with_transcript=-32bp_to_ENSMUST00000007245,NM_138582,uc008cfa.1,uc012aqs.1_5end|description=CAGE_peak_1_at_D17H6S56E-3_5end|id=chr17:35153463..35153491,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002453,2.60e-11,8;CL:0000333,8.10e-09,10;CL:0000095,8.10e-09,10;CL:0000243,8.10e-09,10;CL:0000123,8.10e-09,10;CL:0000125,8.10e-09,10;CL:0000030,8.10e-09,10;CL:0000339,8.10e-09,10;CL:0000128,2.95e-08,6;CL:0000126,2.95e-08,6;CL:0000127,2.95e-08,6;CL:0002319,1.04e-07,43;CL:0000221,1.89e-07,44;CL:0000133,1.89e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.64e-10,73;UBERON:0001016,2.01e-09,75;UBERON:0004733,3.20e-09,6;UBERON:0004732,3.20e-09,6;UBERON:0002028,3.20e-09,6;UBERON:0007277,3.20e-09,6;UBERON:0004121,1.03e-08,95;UBERON:0000924,1.03e-08,95;UBERON:0006601,1.03e-08,95;UBERON:0003076,7.34e-08,12;UBERON:0003057,7.34e-08,12|phase1_expression=0,0.348975407639361,0.454999239389536,0.60492842261366,0,0,0.233612640595526,0.129123323441576,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.935476191661768,0,0,0.319984845586813,0.91763712426868,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,1.96222640742402,2.19686182734472,4.47188767870852,1.53985063787899,5.75010257459886,0,0,0,0,0.286533439938757,1.03134418455488,0.202316460859598,0,0,0.338844532069132,1.77858959222228,0,0,0,1.19840044207362,3.45796474789399,0,0,0,0.571301968807607,1.10434270475807,0,0,0,1.10115880999389,1.27687338085188,2.76491759861238,0,0,0,9.21303896704557,0,2.13917546887534,0,0.427115042397309,0,0,0.604572480854284,2.6087803983151,0,0,0,0,0,2.10666630197628,0,0,0,0.14084341977668,0,0,0,0.865964164044856,0.506719730950197,1.51657333504435,0,0.258937883647172,0.29688427812965,0,0,0.230615497256059,0.60289056221049,0.587943535678524,0.125666591329675,0,0.289198713839823,2.65383165584962,1.7794353494215,0.883366073841574,0.969750506270444,0,20.4946557908083,13.823482649688,0,0,0,0,1.64769703345305,2.28750301409313,0,0,0.255715457330331,1.66230435647648,0.973447578406546,0,0.870848794270651,0.758168275301024,1.47309299120532,0,0,0,0,0,0,0.0937017245597288,0.258703370739016,0,0,0,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0.473489471170421,0,0,0,0,0.116765342367169,0.658239399653922,1.31333971263276,2.99954595319666,4.5321996101853,3.95190207523891,6.44190810049784,0,0,0.660837565967596,1.05780226665418,0,0,0,0,0.22237804384487,0,0,0,0.251335208800269,0.198956472041151,0.38992817423824,1.79763881730844,0,0.597423819763102,0,0,1.1270773567308,0.203651327845314,0,0,0.632365371242573,0.147610147979602,0,0.370191491765402,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717589654087649,0,0.369506380333209,0,0,0,0,0,0,0,0,0.44292937929755,0.159454768657487,0.163863314715738,0.518054945597687,0.433947175744535,0,0,0,0,10.2752377592187,6.91548950893999,0,11.6136626514012,0.315508219416257,1.95219372148319,0.646270193198397,0,0.891194696329576,0.849229592366497,2.02405350837447,2.04579100537918,0.790575555893047,0,0.283880170416537,0,0,1.31976098378028,0,0,0,0.377210159511796,0,0,0,0.363533729477506,1.06949213515416,0,0,0,0.680879211507576,0,0,0,0,0,0.164549020602121,0,0.23467170806371,0,0.882113592219848,1.97863503529776,0.161464426695906,0.241251699712623,0.119372344003136,0.656563598980245,0,10.7546675166096,0,0,0,0,0,0,0,0,0.414599921413271,0,0,0,0.108005340821801,0,0.218362563746178,0.404593039154462,0.41326727862668,0.785267825952089,0.388844919875379,0,0,0,0,0,0,0,0,0.2604087696879,0,0,1.44015003128933,0.632022241256357,0,0,0,0,0,0,0,0.201932899896295,0,0,0,0,0.116876902181569,12.6969014824518,0,0,0,1.54551675225752,0.187682475451182,0,0.428736758158132,0.501572104035363,0.564751842617067,0,0,0,0,0.755393897389701,0,0,0,0,0,0,0,0,0,0,0,0.412070114477788,0.320919209591815,0.252697211763798,0,0,0.187283014939765,0.192075457214608,0.0574354689556133,0,0,0,0,0.147198920134397,0.342869252385415,0,0,0.145346416632329,0.188218760830661,0.0846146078916765,0.182927972872773,0.263069711437843,0,0,0.237270036248348,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0,0.214871054048298,0.191288332068843,1.98532277207564,0.695603506861264|short_description=p1@D17H6S56E-3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:27762 | |||
|HGNC= | |||
|MCL_coexpression_id=30 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9JHA8,uniprot:B2RQ76,uniprot:B9EJA5 | |||
|association_with_transcript=-32bp_to_ENSMUST00000007245,NM_138582,uc008cfa.1,uc012aqs.1_5end | |||
|cluster_id=chr17:35153463..35153491,+ | |||
|description=CAGE_peak_1_at_D17H6S56E-3_5end | |||
|id=chr17:35153463..35153491,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,2.60e-11,8;CL:0000333,8.10e-09,10;CL:0000095,8.10e-09,10;CL:0000243,8.10e-09,10;CL:0000123,8.10e-09,10;CL:0000125,8.10e-09,10;CL:0000030,8.10e-09,10;CL:0000339,8.10e-09,10;CL:0000128,2.95e-08,6;CL:0000126,2.95e-08,6;CL:0000127,2.95e-08,6;CL:0002319,1.04e-07,43;CL:0000221,1.89e-07,44;CL:0000133,1.89e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.64e-10,73;UBERON:0001016,2.01e-09,75;UBERON:0004733,3.20e-09,6;UBERON:0004732,3.20e-09,6;UBERON:0002028,3.20e-09,6;UBERON:0007277,3.20e-09,6;UBERON:0004121,1.03e-08,95;UBERON:0000924,1.03e-08,95;UBERON:0006601,1.03e-08,95;UBERON:0003076,7.34e-08,12;UBERON:0003057,7.34e-08,12 | |||
|phase1_expression=0,0.348975407639361,0.454999239389536,0.60492842261366,0,0,0.233612640595526,0.129123323441576,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.935476191661768,0,0,0.319984845586813,0.91763712426868,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,1.96222640742402,2.19686182734472,4.47188767870852,1.53985063787899,5.75010257459886,0,0,0,0,0.286533439938757,1.03134418455488,0.202316460859598,0,0,0.338844532069132,1.77858959222228,0,0,0,1.19840044207362,3.45796474789399,0,0,0,0.571301968807607,1.10434270475807,0,0,0,1.10115880999389,1.27687338085188,2.76491759861238,0,0,0,9.21303896704557,0,2.13917546887534,0,0.427115042397309,0,0,0.604572480854284,2.6087803983151,0,0,0,0,0,2.10666630197628,0,0,0,0.14084341977668,0,0,0,0.865964164044856,0.506719730950197,1.51657333504435,0,0.258937883647172,0.29688427812965,0,0,0.230615497256059,0.60289056221049,0.587943535678524,0.125666591329675,0,0.289198713839823,2.65383165584962,1.7794353494215,0.883366073841574,0.969750506270444,0,20.4946557908083,13.823482649688,0,0,0,0,1.64769703345305,2.28750301409313,0,0,0.255715457330331,1.66230435647648,0.973447578406546,0,0.870848794270651,0.758168275301024,1.47309299120532,0,0,0,0,0,0,0.0937017245597288,0.258703370739016,0,0,0,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0.473489471170421,0,0,0,0,0.116765342367169,0.658239399653922,1.31333971263276,2.99954595319666,4.5321996101853,3.95190207523891,6.44190810049784,0,0,0.660837565967596,1.05780226665418,0,0,0,0,0.22237804384487,0,0,0,0.251335208800269,0.198956472041151,0.38992817423824,1.79763881730844,0,0.597423819763102,0,0,1.1270773567308,0.203651327845314,0,0,0.632365371242573,0.147610147979602,0,0.370191491765402,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717589654087649,0,0.369506380333209,0,0,0,0,0,0,0,0,0.44292937929755,0.159454768657487,0.163863314715738,0.518054945597687,0.433947175744535,0,0,0,0,10.2752377592187,6.91548950893999,0,11.6136626514012,0.315508219416257,1.95219372148319,0.646270193198397,0,0.891194696329576,0.849229592366497,2.02405350837447,2.04579100537918,0.790575555893047,0,0.283880170416537,0,0,1.31976098378028,0,0,0,0.377210159511796,0,0,0,0.363533729477506,1.06949213515416,0,0,0,0.680879211507576,0,0,0,0,0,0.164549020602121,0,0.23467170806371,0,0.882113592219848,1.97863503529776,0.161464426695906,0.241251699712623,0.119372344003136,0.656563598980245,0,10.7546675166096,0,0,0,0,0,0,0,0,0.414599921413271,0,0,0,0.108005340821801,0,0.218362563746178,0.404593039154462,0.41326727862668,0.785267825952089,0.388844919875379,0,0,0,0,0,0,0,0,0.2604087696879,0,0,1.44015003128933,0.632022241256357,0,0,0,0,0,0,0,0.201932899896295,0,0,0,0,0.116876902181569,12.6969014824518,0,0,0,1.54551675225752,0.187682475451182,0,0.428736758158132,0.501572104035363,0.564751842617067,0,0,0,0,0.755393897389701,0,0,0,0,0,0,0,0,0,0,0,0.412070114477788,0.320919209591815,0.252697211763798,0,0,0.187283014939765,0.192075457214608,0.0574354689556133,0,0,0,0,0.147198920134397,0.342869252385415,0,0,0.145346416632329,0.188218760830661,0.0846146078916765,0.182927972872773,0.263069711437843,0,0,0.237270036248348,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0,0.214871054048298,0.191288332068843,1.98532277207564,0.695603506861264 | |||
|short_description=p1@D17H6S56E-3 | |||
}} |
Revision as of 18:28, 4 August 2015
Short description: | p1@D17H6S56E-3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_D17H6S56E-3_5end |
Coexpression cluster: | MCL_coexpression_mm9:30 |
Association with transcript: | -32bp_to_ENSMUST00000007245, NM_138582, uc008cfa.1, uc012aqs.1_5end |
EntrezGene: | 27762 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 2.60e-11 | 8 |
migratory neural crest cell | 8.10e-09 | 10 |
neuron associated cell | 8.10e-09 | 10 |
glial cell (sensu Vertebrata) | 8.10e-09 | 10 |
neuron associated cell (sensu Vertebrata) | 8.10e-09 | 10 |
glial cell | 8.10e-09 | 10 |
glioblast | 8.10e-09 | 10 |
glioblast (sensu Vertebrata) | 8.10e-09 | 10 |
oligodendrocyte | 2.95e-08 | 6 |
macroglial cell | 2.95e-08 | 6 |
astrocyte | 2.95e-08 | 6 |
neural cell | 1.04e-07 | 43 |
ectodermal cell | 1.89e-07 | 44 |
neurectodermal cell | 1.89e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 7.64e-10 | 73 |
nervous system | 2.01e-09 | 75 |
segmental subdivision of hindbrain | 3.20e-09 | 6 |
segmental subdivision of nervous system | 3.20e-09 | 6 |
hindbrain | 3.20e-09 | 6 |
presumptive hindbrain | 3.20e-09 | 6 |
ectoderm-derived structure | 1.03e-08 | 95 |
ectoderm | 1.03e-08 | 95 |
presumptive ectoderm | 1.03e-08 | 95 |
posterior neural tube | 7.34e-08 | 12 |
chordal neural plate | 7.34e-08 | 12 |