FFCP PHASE1:Mm9::chr18:82753941..82753954,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=270|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr18:82753941..82753954,+|id=chr18:82753941..82753954,+|ontology_enrichment_celltype=CL:0000117!1.48e-09!23;CL:0000337!1.48e-09!23;CL:0000221!1.04e-08!44;CL:0000133!1.04e-08!44;CL:0002614!6.11e-08!3;CL:0002319!8.23e-08!43;CL:0002610!9.58e-08!3;CL:0000540!5.66e-07!33;CL:0000047!5.66e-07!33;CL:0000031!5.66e-07!33;CL:0000404!5.66e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,8.68e-15,23;CL:0000337,8.68e-15,23;CL:0002614,1.49e-12,3;CL:0002610,3.21e-12,3;CL:0002319,2.21e-10,43;CL:0000221,4.27e-10,44;CL:0000133,4.27e-10,44;CL:0000540,8.96e-10,33;CL:0000047,8.96e-10,33;CL:0000031,8.96e-10,33;CL:0000404,8.96e-10,33;CL:0002611,1.39e-08,2;CL:0000393,5.31e-08,39;CL:0000211,5.31e-08,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!3.28e-28!75;UBERON:0001016!3.28e-28!75;UBERON:0001017!1.48e-25!73;UBERON:0005743!1.48e-25!73;UBERON:0001049!8.18e-25!52;UBERON:0005068!8.18e-25!52;UBERON:0006241!8.18e-25!52;UBERON:0007135!8.18e-25!52;UBERON:0000955!7.18e-24!50;UBERON:0006238!7.18e-24!50;UBERON:0002616!1.34e-22!49;UBERON:0004121!4.36e-21!102;UBERON:0000924!4.36e-21!102;UBERON:0006601!4.36e-21!102;UBERON:0000033!1.30e-20!63;UBERON:0002020!3.64e-19!34;UBERON:0002346!1.39e-17!71;UBERON:0003075!1.39e-17!71;UBERON:0007284!1.39e-17!71;UBERON:0002021!3.66e-14!10;UBERON:0000411!3.66e-14!10;UBERON:0001950!3.66e-14!10;UBERON:0002791!7.41e-14!29;UBERON:0003528!7.41e-14!29;UBERON:0001893!7.41e-14!29;UBERON:0002298!9.39e-14!6;UBERON:0003080!1.25e-13!40;UBERON:0003076!2.04e-13!12;UBERON:0003057!2.04e-13!12;UBERON:0007811!3.68e-13!86;UBERON:0002780!2.10e-12!39;UBERON:0001890!2.10e-12!39;UBERON:0006240!2.10e-12!39;UBERON:0000153!1.95e-11!94;UBERON:0002619!3.25e-11!17;UBERON:0000956!1.83e-10!21;UBERON:0001869!1.83e-10!21;UBERON:0000203!1.83e-10!21;UBERON:0003056!2.86e-10!49;UBERON:0002950!1.05e-09!4;UBERON:0001891!1.05e-09!4;UBERON:0009616!1.05e-09!4;UBERON:0002240!4.08e-09!6;UBERON:0005174!4.08e-09!6;UBERON:0001137!4.08e-09!6;UBERON:0004111!6.79e-09!122;UBERON:0000025!2.27e-08!114;UBERON:0002038!6.11e-08!3;UBERON:0002308!6.11e-08!3;UBERON:0009663!6.11e-08!3;UBERON:0009661!6.11e-08!3;UBERON:0006331!6.11e-08!3;UBERON:0000125!6.11e-08!3;UBERON:0004684!9.58e-08!3;UBERON:0002275!9.58e-08!3;UBERON:0001948!2.75e-07!5;UBERON:0002315!2.75e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.91e-23,54;UBERON:0001016,6.63e-22,75;UBERON:0001017,1.88e-20,73;UBERON:0001049,3.74e-19,52;UBERON:0005068,3.74e-19,52;UBERON:0006241,3.74e-19,52;UBERON:0007135,3.74e-19,52;UBERON:0003076,1.90e-18,12;UBERON:0003057,1.90e-18,12;UBERON:0004121,1.82e-16,95;UBERON:0000924,1.82e-16,95;UBERON:0006601,1.82e-16,95;UBERON:0002950,1.36e-15,4;UBERON:0001891,1.36e-15,4;UBERON:0009616,1.36e-15,4;UBERON:0010286,1.36e-15,4;UBERON:0002346,6.29e-15,64;UBERON:0003075,6.29e-15,64;UBERON:0007284,6.29e-15,64;UBERON:0002240,7.02e-15,6;UBERON:0005174,7.02e-15,6;UBERON:0001137,7.02e-15,6;UBERON:0010371,1.15e-12,73;UBERON:0002038,1.49e-12,3;UBERON:0009663,1.49e-12,3;UBERON:0009661,1.49e-12,3;UBERON:0000125,1.49e-12,3;UBERON:0002308,1.49e-12,3;UBERON:0004684,3.21e-12,3;UBERON:0002275,3.21e-12,3;UBERON:0001948,1.00e-11,5;UBERON:0002315,1.00e-11,5;UBERON:0002020,7.37e-11,34;UBERON:0002616,7.45e-11,46;UBERON:0000955,1.43e-10,47;UBERON:0006238,1.43e-10,47;UBERON:0010314,2.41e-09,92;UBERON:0001896,1.27e-08,2;UBERON:0002298,1.27e-08,2;UBERON:0005290,1.27e-08,2;UBERON:0010096,1.27e-08,2;UBERON:0002256,1.39e-08,2;UBERON:0000025,7.28e-08,114;UBERON:0003080,3.03e-07,40;UBERON:0004111,4.12e-07,122;UBERON:0011216,9.08e-07,194|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.2264013585371,0,0,0,5.14171771926846,5.07997644188711,0,0.0958454710182364,0,6.60695285996332,4.85211884723713,5.52983519722476,0,0,0,13.6799669510677,8.4414391504752,5.19514042441154,2.06240009831567,1.42371680799103,0,2.72614295999463,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0.704217098883403,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0.220841518460394,0,0,0.585561594023094,3.97948742945565,0,0,0,0,1.9472783122627,0.915001205637253,0,1.04294592115366,1.53429274398198,2.49345653471472,3.73154905055843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.0137647496948,7.03270119553219,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.8939313422207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.920650473014354,2.86447756719698,1.20297227640581,1.37016503954128,0,0.675022500231806,0.45032120322422,0.453142408984205,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0.463735671240843|short_description=p@chr18:82753941..82753954,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=270 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr18:82753941..82753954,+ | |||
|description=CAGE_peak_at_chr18:82753941..82753954,+ | |||
|id=chr18:82753941..82753954,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.48e-09!23;CL:0000337!1.48e-09!23;CL:0000221!1.04e-08!44;CL:0000133!1.04e-08!44;CL:0002614!6.11e-08!3;CL:0002319!8.23e-08!43;CL:0002610!9.58e-08!3;CL:0000540!5.66e-07!33;CL:0000047!5.66e-07!33;CL:0000031!5.66e-07!33;CL:0000404!5.66e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.68e-15,23;CL:0000337,8.68e-15,23;CL:0002614,1.49e-12,3;CL:0002610,3.21e-12,3;CL:0002319,2.21e-10,43;CL:0000221,4.27e-10,44;CL:0000133,4.27e-10,44;CL:0000540,8.96e-10,33;CL:0000047,8.96e-10,33;CL:0000031,8.96e-10,33;CL:0000404,8.96e-10,33;CL:0002611,1.39e-08,2;CL:0000393,5.31e-08,39;CL:0000211,5.31e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.28e-28!75;UBERON:0001016!3.28e-28!75;UBERON:0001017!1.48e-25!73;UBERON:0005743!1.48e-25!73;UBERON:0001049!8.18e-25!52;UBERON:0005068!8.18e-25!52;UBERON:0006241!8.18e-25!52;UBERON:0007135!8.18e-25!52;UBERON:0000955!7.18e-24!50;UBERON:0006238!7.18e-24!50;UBERON:0002616!1.34e-22!49;UBERON:0004121!4.36e-21!102;UBERON:0000924!4.36e-21!102;UBERON:0006601!4.36e-21!102;UBERON:0000033!1.30e-20!63;UBERON:0002020!3.64e-19!34;UBERON:0002346!1.39e-17!71;UBERON:0003075!1.39e-17!71;UBERON:0007284!1.39e-17!71;UBERON:0002021!3.66e-14!10;UBERON:0000411!3.66e-14!10;UBERON:0001950!3.66e-14!10;UBERON:0002791!7.41e-14!29;UBERON:0003528!7.41e-14!29;UBERON:0001893!7.41e-14!29;UBERON:0002298!9.39e-14!6;UBERON:0003080!1.25e-13!40;UBERON:0003076!2.04e-13!12;UBERON:0003057!2.04e-13!12;UBERON:0007811!3.68e-13!86;UBERON:0002780!2.10e-12!39;UBERON:0001890!2.10e-12!39;UBERON:0006240!2.10e-12!39;UBERON:0000153!1.95e-11!94;UBERON:0002619!3.25e-11!17;UBERON:0000956!1.83e-10!21;UBERON:0001869!1.83e-10!21;UBERON:0000203!1.83e-10!21;UBERON:0003056!2.86e-10!49;UBERON:0002950!1.05e-09!4;UBERON:0001891!1.05e-09!4;UBERON:0009616!1.05e-09!4;UBERON:0002240!4.08e-09!6;UBERON:0005174!4.08e-09!6;UBERON:0001137!4.08e-09!6;UBERON:0004111!6.79e-09!122;UBERON:0000025!2.27e-08!114;UBERON:0002038!6.11e-08!3;UBERON:0002308!6.11e-08!3;UBERON:0009663!6.11e-08!3;UBERON:0009661!6.11e-08!3;UBERON:0006331!6.11e-08!3;UBERON:0000125!6.11e-08!3;UBERON:0004684!9.58e-08!3;UBERON:0002275!9.58e-08!3;UBERON:0001948!2.75e-07!5;UBERON:0002315!2.75e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.91e-23,54;UBERON:0001016,6.63e-22,75;UBERON:0001017,1.88e-20,73;UBERON:0001049,3.74e-19,52;UBERON:0005068,3.74e-19,52;UBERON:0006241,3.74e-19,52;UBERON:0007135,3.74e-19,52;UBERON:0003076,1.90e-18,12;UBERON:0003057,1.90e-18,12;UBERON:0004121,1.82e-16,95;UBERON:0000924,1.82e-16,95;UBERON:0006601,1.82e-16,95;UBERON:0002950,1.36e-15,4;UBERON:0001891,1.36e-15,4;UBERON:0009616,1.36e-15,4;UBERON:0010286,1.36e-15,4;UBERON:0002346,6.29e-15,64;UBERON:0003075,6.29e-15,64;UBERON:0007284,6.29e-15,64;UBERON:0002240,7.02e-15,6;UBERON:0005174,7.02e-15,6;UBERON:0001137,7.02e-15,6;UBERON:0010371,1.15e-12,73;UBERON:0002038,1.49e-12,3;UBERON:0009663,1.49e-12,3;UBERON:0009661,1.49e-12,3;UBERON:0000125,1.49e-12,3;UBERON:0002308,1.49e-12,3;UBERON:0004684,3.21e-12,3;UBERON:0002275,3.21e-12,3;UBERON:0001948,1.00e-11,5;UBERON:0002315,1.00e-11,5;UBERON:0002020,7.37e-11,34;UBERON:0002616,7.45e-11,46;UBERON:0000955,1.43e-10,47;UBERON:0006238,1.43e-10,47;UBERON:0010314,2.41e-09,92;UBERON:0001896,1.27e-08,2;UBERON:0002298,1.27e-08,2;UBERON:0005290,1.27e-08,2;UBERON:0010096,1.27e-08,2;UBERON:0002256,1.39e-08,2;UBERON:0000025,7.28e-08,114;UBERON:0003080,3.03e-07,40;UBERON:0004111,4.12e-07,122;UBERON:0011216,9.08e-07,194 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.2264013585371,0,0,0,5.14171771926846,5.07997644188711,0,0.0958454710182364,0,6.60695285996332,4.85211884723713,5.52983519722476,0,0,0,13.6799669510677,8.4414391504752,5.19514042441154,2.06240009831567,1.42371680799103,0,2.72614295999463,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0.704217098883403,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0.220841518460394,0,0,0.585561594023094,3.97948742945565,0,0,0,0,1.9472783122627,0.915001205637253,0,1.04294592115366,1.53429274398198,2.49345653471472,3.73154905055843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.0137647496948,7.03270119553219,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.8939313422207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.920650473014354,2.86447756719698,1.20297227640581,1.37016503954128,0,0.675022500231806,0.45032120322422,0.453142408984205,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0.463735671240843 | |||
|short_description=p@chr18:82753941..82753954,+ | |||
}} |
Latest revision as of 04:50, 6 August 2015
Short description: | p@chr18:82753941..82753954, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:82753941..82753954, + |
Coexpression cluster: | MCL_coexpression_mm9:270 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.68e-15 | 23 |
neuroblast (sensu Vertebrata) | 8.68e-15 | 23 |
neuron of the substantia nigra | 1.49e-12 | 3 |
raphe nuclei neuron | 3.21e-12 | 3 |
neural cell | 2.21e-10 | 43 |
ectodermal cell | 4.27e-10 | 44 |
neurectodermal cell | 4.27e-10 | 44 |
neuron | 8.96e-10 | 33 |
neuronal stem cell | 8.96e-10 | 33 |
neuroblast | 8.96e-10 | 33 |
electrically signaling cell | 8.96e-10 | 33 |
neuron of the dorsal spinal cord | 1.39e-08 | 2 |
electrically responsive cell | 5.31e-08 | 39 |
electrically active cell | 5.31e-08 | 39 |