Personal tools

FFCP PHASE1:Mm9::chr1:178744297..178744320,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP|EntrezGene=545389|HGNC=|MCL_coexpression_id=334|UniProt=Q6A065|association_with_transcript=-99bp_to_ENSMUST00000070119_5end|description=CAGE_peak_3_at_Cep170_5end|id=chr1:178744297..178744320,-|ontology_enrichment_celltype=CL:0000540!4.01e-10!33;CL:0000047!4.01e-10!33;CL:0000031!4.01e-10!33;CL:0000404!4.01e-10!33;CL:0000117!2.25e-08!23;CL:0000337!2.25e-08!23|ontology_enrichment_celltype_v019_2=CL:0000540,8.46e-11,33;CL:0000047,8.46e-11,33;CL:0000031,8.46e-11,33;CL:0000404,8.46e-11,33;CL:0000117,7.39e-09,23;CL:0000337,7.39e-09,23;CL:0000393,3.96e-07,39;CL:0000211,3.96e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!1.87e-09!94;UBERON:0007811!1.16e-08!86;UBERON:0000073!7.38e-08!75;UBERON:0001016!7.38e-08!75;UBERON:0001017!8.90e-08!73;UBERON:0005743!8.90e-08!73;UBERON:0003056!4.76e-07!49;UBERON:0002346!7.76e-07!71;UBERON:0003075!7.76e-07!71;UBERON:0007284!7.76e-07!71|ontology_enrichment_uberon_v019_2=UBERON:0002346,8.67e-08,64;UBERON:0003075,8.67e-08,64;UBERON:0007284,8.67e-08,64;UBERON:0001016,1.15e-07,75;UBERON:0001017,1.42e-07,73;UBERON:0003056,2.51e-07,49;UBERON:0004121,8.97e-07,95;UBERON:0000924,8.97e-07,95;UBERON:0006601,8.97e-07,95|phase1_expression=2.5623815536767,0,0,0,0,0.16787927191189,0,0.645616617207881,1.68946466582,1.87251621057595,0.34243593645101,0.717949430958028,0.856003649656029,0.0874204024189974,0.333109761815663,0.607425802169478,0,1.73504190947031,2.4680598049033,0.42438965179803,2.46625541438102,2.48227378002213,3.13439746966722,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,1.76469446409304,2.73218193983378,0.485510353031154,0.125896817975577,0.506884656097573,0.367093504323363,0.782391344348039,0.218025156380447,0.219686182734472,0,0.139986421625363,1.43752564364972,2.01339127269284,0,2.01656279485478,0,0.286533439938757,0,7.08107613008592,3.70293685490423,8.87363964908651,1.35537812827653,0,0.449949858640699,0,0.7104801149461,0,0.384218305321555,2.38486108309499,2.56511282830212,3.78584930432488,4.28476476605705,3.09215957332259,15.5563315002992,9.77623804386011,14.7075005857603,1.10115880999389,1.65993539510744,3.37934373163736,6.72620067423989,8.14240028061446,5.73004707612436,0.558365998002762,3.37657566019008,3.20876320331301,4.71405736757868,7.68807076315156,8.20157561631323,1.4387976733305,2.19157524309678,0.289864488701678,0,0.679971333707751,0,0,0,0.561777680527007,0.170430322578058,0.519572009205738,0,1.69012103732017,0,0,0,0,0.506719730950197,0,0.91347103775248,1.29468941823586,0.445326417194474,1.56136794089522,0,0.691846491768175,1.20578112442098,1.76383060703557,0.376999773989026,0.247194967734374,0.289198713839823,1.76922110389975,0.647067399789637,0.662524555381181,1.93950101254089,0,0.585561594023094,0.628340120440365,0.255457055208591,0.838705871541442,1.79970819298022,1.39777249780371,2.99581278809645,2.28750301409313,54.7852975212089,1.91206752211504,2.30143911597297,1.66230435647648,4.54275536589721,2.34230536855727,0.870848794270651,0.758168275301024,0.210441855886474,4.42409506073193,6.66716102857071,4.50155324513373,7.08312643827861,9.5251098811859,5.25266253167884,6.37171727006156,1.29351685369508,4.095791865724,5.29497024469894,3.69497360744293,1.53437012699302,1.94633074457919,0.696504333044333,1.23469281844766,3.58261680273288,0,0.257347907114715,0.852490498186778,2.89976081549703,1.40715635988658,1.2604344302271,3.07768156260773,1.96764231747404,0.617068451549513,2.55787339225449,0.804820204198858,0.583826711835847,0.493679549740441,0.492502392237286,0.648550476366846,0.146199987425332,0,0.402619256281115,1.68231958851302,6.79170441703277,0,0.264450566663544,4.47905326123991,4.18026009348789,2.70621668776396,1.00841762311671,1.33426826306922,0.570676878337677,0.474529061544512,0.494096864172033,0.502670417600539,0.795825888164603,0.19496408711912,0,0,0,1.70701110857774,3.19895835307241,1.1270773567308,2.8511185898344,1.55161989734101,2.03393877681924,1.20149420536089,0.442830443938806,0.470996183524124,0.246794327843601,0,2.16898637430922,1.57247196090562,0.899448449539415,0.202860121388503,0.964708639009667,0.25462585178142,0,0.324270453550071,0,0,0.372140947668503,0,0,0,0,0.184753190166605,4.16881105895066,1.95557971730431,3.05541154395339,1.87752198630802,1.84256883185997,0.714130922658041,2.34160377429359,2.20689201748667,0.8858587585951,1.11618338060241,1.47476983244164,1.20879487306127,0.433947175744535,0,0.54390568381871,0,0.551873492609465,1.60550589987792,2.22702204525186,1.3114795630134,0.252470927204373,1.26203287766503,3.51394869866975,3.87762115919038,3.34556317133573,1.33679204449436,4.24614796183249,3.64329631507405,3.50707029493574,3.16230222357219,8.35435422696698,0.851640511249612,1.78065603667255,2.28041743095006,0.494910368917606,0,1.45668381692989,0.906970670894253,1.13163047853539,0,1.22974059177571,0.775284879504663,0.727067458955011,0,0.316036757935816,0,1.03135543248187,1.36175842301515,5.40183282093931,2.71653235943784,4.28674070063185,5.14286677562593,2.67553226403106,1.81003922662333,0.608929898229199,2.81606049676452,2.96564899209348,0.441056796109924,0.32977250588296,0.645857706783622,0.663442174209714,0.477489376012546,0.492422699235184,0,0.927126510052548,0.170870880797853,1.65109494370578,1.29636169158798,0.188368457004691,0.683471138605126,0.686334519619568,1.01987057996313,1.25956307091292,0.967399816630967,0,2.84702394223022,2.03319467126849,1.40406943068342,0.418176592028937,0.655087691238533,0.539457385539283,0.743881101528023,0,0.129614973291793,0,3.38215763210514,2.99033092087958,2.15096037594227,2.72231663681667,1.42075805825504,3.04121025883401,1.5256441023948,1.69265700297135,2.62148361064277,4.1069300540421,4.32045009386798,17.696622755178,1.21635129174099,2.87590680061516,5.3267537420896,6.98204113103178,7.3512101269068,10.4570041082373,12.5536098098391,13.1256384932592,14.78412049107,15.5272325110734,16.8602133679772,15.490106504093,16.4796432076012,0,1.55390167361845,1.97370484540847,1.84673078000486,0,0.375364950902364,0.549454872801795,0.428736758158132,0,5.0827665835536,3.22227665555024,2.29158205375759,1.3748254587495,0,2.2661816921691,0.675022500231806,0.900642406448441,0,0.51776031175182,7.78405106881325,9.97562183502578,5.46347538413229,1.70174701947806,4.82110274044359,6.43452279575049,4.00044110042907,2.88449080134452,3.20919209591815,3.53776096469316,4.05566879824384,3.01802146217722,3.09016974650612,4.09760975391163,4.19278923375977,7.62069906052918,3.47652977834566,3.6652751888104,6.59337441285291,4.56316652416632,3.77156177623957,3.19456451086807,6.43777712857767,3.63366041580821,3.01150017329058,3.13074049199203,4.024415403201,2.63069711437843,3.66671107383827,1.68342681497322,3.79632057997357,3.34915240076916,4.50154147486658,3.87342102964915,2.89359916471712,3.74715866906919,2.33931608445408,3.00819475667618,0.765153328275374,0.441182838239031,0.695603506861264|short_description=p3@Cep170}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:545389
|HGNC=
|MCL_coexpression_id=334
|TSSclassifier=NA
|UniProt=uniprot:Q6A065
|association_with_transcript=-99bp_to_ENSMUST00000070119_5end
|cluster_id=chr1:178744297..178744320,-
|description=CAGE_peak_3_at_Cep170_5end
|id=chr1:178744297..178744320,-
|ontology_enrichment_celltype=CL:0000540!4.01e-10!33;CL:0000047!4.01e-10!33;CL:0000031!4.01e-10!33;CL:0000404!4.01e-10!33;CL:0000117!2.25e-08!23;CL:0000337!2.25e-08!23
|ontology_enrichment_celltype_v019_2=CL:0000540,8.46e-11,33;CL:0000047,8.46e-11,33;CL:0000031,8.46e-11,33;CL:0000404,8.46e-11,33;CL:0000117,7.39e-09,23;CL:0000337,7.39e-09,23;CL:0000393,3.96e-07,39;CL:0000211,3.96e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000153!1.87e-09!94;UBERON:0007811!1.16e-08!86;UBERON:0000073!7.38e-08!75;UBERON:0001016!7.38e-08!75;UBERON:0001017!8.90e-08!73;UBERON:0005743!8.90e-08!73;UBERON:0003056!4.76e-07!49;UBERON:0002346!7.76e-07!71;UBERON:0003075!7.76e-07!71;UBERON:0007284!7.76e-07!71
|ontology_enrichment_uberon_v019_2=UBERON:0002346,8.67e-08,64;UBERON:0003075,8.67e-08,64;UBERON:0007284,8.67e-08,64;UBERON:0001016,1.15e-07,75;UBERON:0001017,1.42e-07,73;UBERON:0003056,2.51e-07,49;UBERON:0004121,8.97e-07,95;UBERON:0000924,8.97e-07,95;UBERON:0006601,8.97e-07,95
|phase1_expression=2.5623815536767,0,0,0,0,0.16787927191189,0,0.645616617207881,1.68946466582,1.87251621057595,0.34243593645101,0.717949430958028,0.856003649656029,0.0874204024189974,0.333109761815663,0.607425802169478,0,1.73504190947031,2.4680598049033,0.42438965179803,2.46625541438102,2.48227378002213,3.13439746966722,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,1.76469446409304,2.73218193983378,0.485510353031154,0.125896817975577,0.506884656097573,0.367093504323363,0.782391344348039,0.218025156380447,0.219686182734472,0,0.139986421625363,1.43752564364972,2.01339127269284,0,2.01656279485478,0,0.286533439938757,0,7.08107613008592,3.70293685490423,8.87363964908651,1.35537812827653,0,0.449949858640699,0,0.7104801149461,0,0.384218305321555,2.38486108309499,2.56511282830212,3.78584930432488,4.28476476605705,3.09215957332259,15.5563315002992,9.77623804386011,14.7075005857603,1.10115880999389,1.65993539510744,3.37934373163736,6.72620067423989,8.14240028061446,5.73004707612436,0.558365998002762,3.37657566019008,3.20876320331301,4.71405736757868,7.68807076315156,8.20157561631323,1.4387976733305,2.19157524309678,0.289864488701678,0,0.679971333707751,0,0,0,0.561777680527007,0.170430322578058,0.519572009205738,0,1.69012103732017,0,0,0,0,0.506719730950197,0,0.91347103775248,1.29468941823586,0.445326417194474,1.56136794089522,0,0.691846491768175,1.20578112442098,1.76383060703557,0.376999773989026,0.247194967734374,0.289198713839823,1.76922110389975,0.647067399789637,0.662524555381181,1.93950101254089,0,0.585561594023094,0.628340120440365,0.255457055208591,0.838705871541442,1.79970819298022,1.39777249780371,2.99581278809645,2.28750301409313,54.7852975212089,1.91206752211504,2.30143911597297,1.66230435647648,4.54275536589721,2.34230536855727,0.870848794270651,0.758168275301024,0.210441855886474,4.42409506073193,6.66716102857071,4.50155324513373,7.08312643827861,9.5251098811859,5.25266253167884,6.37171727006156,1.29351685369508,4.095791865724,5.29497024469894,3.69497360744293,1.53437012699302,1.94633074457919,0.696504333044333,1.23469281844766,3.58261680273288,0,0.257347907114715,0.852490498186778,2.89976081549703,1.40715635988658,1.2604344302271,3.07768156260773,1.96764231747404,0.617068451549513,2.55787339225449,0.804820204198858,0.583826711835847,0.493679549740441,0.492502392237286,0.648550476366846,0.146199987425332,0,0.402619256281115,1.68231958851302,6.79170441703277,0,0.264450566663544,4.47905326123991,4.18026009348789,2.70621668776396,1.00841762311671,1.33426826306922,0.570676878337677,0.474529061544512,0.494096864172033,0.502670417600539,0.795825888164603,0.19496408711912,0,0,0,1.70701110857774,3.19895835307241,1.1270773567308,2.8511185898344,1.55161989734101,2.03393877681924,1.20149420536089,0.442830443938806,0.470996183524124,0.246794327843601,0,2.16898637430922,1.57247196090562,0.899448449539415,0.202860121388503,0.964708639009667,0.25462585178142,0,0.324270453550071,0,0,0.372140947668503,0,0,0,0,0.184753190166605,4.16881105895066,1.95557971730431,3.05541154395339,1.87752198630802,1.84256883185997,0.714130922658041,2.34160377429359,2.20689201748667,0.8858587585951,1.11618338060241,1.47476983244164,1.20879487306127,0.433947175744535,0,0.54390568381871,0,0.551873492609465,1.60550589987792,2.22702204525186,1.3114795630134,0.252470927204373,1.26203287766503,3.51394869866975,3.87762115919038,3.34556317133573,1.33679204449436,4.24614796183249,3.64329631507405,3.50707029493574,3.16230222357219,8.35435422696698,0.851640511249612,1.78065603667255,2.28041743095006,0.494910368917606,0,1.45668381692989,0.906970670894253,1.13163047853539,0,1.22974059177571,0.775284879504663,0.727067458955011,0,0.316036757935816,0,1.03135543248187,1.36175842301515,5.40183282093931,2.71653235943784,4.28674070063185,5.14286677562593,2.67553226403106,1.81003922662333,0.608929898229199,2.81606049676452,2.96564899209348,0.441056796109924,0.32977250588296,0.645857706783622,0.663442174209714,0.477489376012546,0.492422699235184,0,0.927126510052548,0.170870880797853,1.65109494370578,1.29636169158798,0.188368457004691,0.683471138605126,0.686334519619568,1.01987057996313,1.25956307091292,0.967399816630967,0,2.84702394223022,2.03319467126849,1.40406943068342,0.418176592028937,0.655087691238533,0.539457385539283,0.743881101528023,0,0.129614973291793,0,3.38215763210514,2.99033092087958,2.15096037594227,2.72231663681667,1.42075805825504,3.04121025883401,1.5256441023948,1.69265700297135,2.62148361064277,4.1069300540421,4.32045009386798,17.696622755178,1.21635129174099,2.87590680061516,5.3267537420896,6.98204113103178,7.3512101269068,10.4570041082373,12.5536098098391,13.1256384932592,14.78412049107,15.5272325110734,16.8602133679772,15.490106504093,16.4796432076012,0,1.55390167361845,1.97370484540847,1.84673078000486,0,0.375364950902364,0.549454872801795,0.428736758158132,0,5.0827665835536,3.22227665555024,2.29158205375759,1.3748254587495,0,2.2661816921691,0.675022500231806,0.900642406448441,0,0.51776031175182,7.78405106881325,9.97562183502578,5.46347538413229,1.70174701947806,4.82110274044359,6.43452279575049,4.00044110042907,2.88449080134452,3.20919209591815,3.53776096469316,4.05566879824384,3.01802146217722,3.09016974650612,4.09760975391163,4.19278923375977,7.62069906052918,3.47652977834566,3.6652751888104,6.59337441285291,4.56316652416632,3.77156177623957,3.19456451086807,6.43777712857767,3.63366041580821,3.01150017329058,3.13074049199203,4.024415403201,2.63069711437843,3.66671107383827,1.68342681497322,3.79632057997357,3.34915240076916,4.50154147486658,3.87342102964915,2.89359916471712,3.74715866906919,2.33931608445408,3.00819475667618,0.765153328275374,0.441182838239031,0.695603506861264
|short_description=p3@Cep170
}}

Revision as of 08:57, 5 August 2015

Short description:p3@Cep170
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Cep170_5end
Coexpression cluster:MCL_coexpression_mm9:334
Association with transcript: -99bp_to_ENSMUST00000070119_5end
EntrezGene:545389
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Cep170

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.56
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.65
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.69
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.87
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.72
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.86
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.74
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.47
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.47
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.48
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.13
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.73
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.51
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C37.08
Mouse Granule cells, donor2.CNhs12357.11731-123E33.70
Mouse Granule cells, donor3.CNhs12108.11636-122C78.87
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.38
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.57
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.79
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.09
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D215.56
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F29.78
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D614.71
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.66
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.73
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F48.14
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.73
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.21
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.71
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F67.69
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E18.20
Mouse Schwann, donor1.CNhs12507.11728-123D91.44
Mouse Schwann, donor2.CNhs12573.11746-123F92.19
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.69
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.91
accessory axillary lymph node, adult.CNhs10475.1063-29H91.29
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C51.56
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F51.21
adrenal gland, neonate N00.CNhs11191.1311-23C11.76
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.84
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.40
corpora quadrigemina, adult.CNhs10501.16-22A43.00
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F154.79
cortex, adult.CNhs10473.12-14D51.91
cortex, neonate N30.CNhs11107.1392-42F22.30
diencephalon, adult.CNhs10482.20-12F21.66
diencephalon, neonate N30.CNhs11201.1388-42B24.54
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.34
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.87
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C64.42
eyeball, embryo E14.CNhs10521.399-16E26.67
eyeball, embryo E15.CNhs10593.426-16C94.50
eyeball, embryo E17.CNhs11023.1261-18D47.08
eyeball, neonate N00.CNhs11207.633-15C69.53
eyeball, neonate N01.CNhs11140.1532-43E75.25
eyeball, neonate N02.CNhs11205.1551-44G86.37
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E24.10
forelimb, embryo E12.CNhs10600.359-14H25.29
forelimb, embryo E13.CNhs10589.384-1E23.69
forelimb, embryo E14.CNhs10577.413-26A81.53
forelimb, embryo E15.CNhs11007.437-20E71.95
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I63.58
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E92.90
heart, embryo E12.CNhs11015.353-12F51.41
heart, embryo E13.CNhs11013.376-3I91.26
heart, embryo E14.CNhs10597.403-26D43.08
heart, embryo E15.CNhs11017.431-16C81.97
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E52.56
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.65
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E81.68
hippocampus, neonate N00.CNhs11228.627-43G16.79
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I54.48
intestine, embryo E13.CNhs11010.381-16D54.18
intestine, embryo E15.CNhs10602.976-16D82.71
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D31.33
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I91.71
kidney, embryo E15.CNhs10997.434-16F83.20
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I22.85
kidney, embryo E18.CNhs11001.1288-20C71.55
kidney, neonate N00.CNhs11214.646-21G72.03
kidney, neonate N10.CNhs11206.758-6D51.20
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F82.17
liver, embryo E13.CNhs10524.378-3H61.57
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.96
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G24.17
lung, embryo E14.CNhs10604.404-26F81.96
lung, embryo E15.CNhs11020.432-17C53.06
lung, embryo E16.CNhs10998.458-17B61.88
lung, embryo E17.CNhs10605.480-44A61.84
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C62.34
lung, neonate N06.CNhs11212.683-20E52.21
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E61.12
lung, neonate N20.CNhs11109.822-18A41.47
lung, neonate N25.CNhs11119.1359-25C71.21
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C21.61
medulla oblongata, neonate N30.CNhs11200.1396-42A32.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.31
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.51
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.88
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.35
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.25
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.64
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.51
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.16
olfactory brain, adult.CNhs10489.18-22I98.35
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H71.78
ovary, neonate N00.CNhs11217.1299-22I42.28
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.46
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E65.40
pituitary gland, embryo E13.CNhs11009.370-44C72.72
pituitary gland, embryo E14.CNhs11037.398-44A54.29
pituitary gland, embryo E15.CNhs10592.427-16B95.14
pituitary gland, embryo E16.CNhs11036.449-43F62.68
pituitary gland, embryo E17.CNhs11039.1265-44F51.81
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I72.82
placenta, adult pregnant day17.CNhs10464.577-18G32.97
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.66
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.93
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C11.65
spleen, embryo E18.CNhs11011.1271-21F21.30
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.68
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.26
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.97
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E32.85
stomach, embryo E15.CNhs10603.1252-16G82.03
stomach, embryo E16.CNhs11022.459-17D41.40
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.74
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G53.38
testis, embryo E13.CNhs11031.389-23F52.99
testis, embryo E15.CNhs11034.443-27C52.15
testis, embryo E16.CNhs11033.470-26G52.72
testis, embryo E17.CNhs11029.486-18I51.42
testis, embryo E18.CNhs11027.503-18G53.04
testis, neonate N00.CNhs11189.1300-22B71.53
testis, neonate N07.CNhs11222.726-26I41.69
testis, neonate N10.CNhs11204.763-44D92.62
testis, neonate N20.CNhs11110.839-18H34.11
testis, neonate N30.CNhs11130.1391-42E24.32
thymus, adult.CNhs10471.38-12B517.70
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I22.88
thymus, embryo E16.CNhs11002.456-26C55.33
thymus, embryo E17.CNhs10581.478-18C16.98
thymus, embryo E18.CNhs10595.1273-19G47.35
thymus, neonate N02.CNhs11181.1541-43F810.46
thymus, neonate N03.CNhs11137.2104-43C712.55
thymus, neonate N06.CNhs11197.681-26C413.13
thymus, neonate N07.CNhs11211.713-19D314.78
thymus, neonate N10.CNhs11194.748-24E415.53
thymus, neonate N20.CNhs11186.820-7A216.86
thymus, neonate N25.CNhs11125.1362-25G715.49
thymus, neonate N30.CNhs11132.1393-42G216.48
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.97
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.85
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.08
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I87.78
whole body, embryo E12.CNhs10587.857-27C99.98
whole body, embryo E13.CNhs10512.372-23H25.46
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B14.82
whole body, embryo E16.CNhs10514.453-14F26.43
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.54
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.06
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.02
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.10
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.19
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G57.62
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.48
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.67
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.56
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.19
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.44
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.63
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.01
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.13
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.02
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.67
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.35
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.50
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.87
whole body, embryo E17.5.CNhs10513.490-9F92.89
whole body, embryo E17.CNhs10517.475-3I53.75
whole body, embryo E18.CNhs10516.493-3B32.34
whole body, neonate N00.CNhs10525.657-19C23.01
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron8.46e-1133
neuronal stem cell8.46e-1133
neuroblast8.46e-1133
electrically signaling cell8.46e-1133
CNS neuron (sensu Vertebrata)7.39e-0923
neuroblast (sensu Vertebrata)7.39e-0923
electrically responsive cell3.96e-0739
electrically active cell3.96e-0739

Uber anatomy
Ontology termp-valuen
neurectoderm8.67e-0864
neural plate8.67e-0864
presumptive neural plate8.67e-0864
nervous system1.15e-0775
central nervous system1.42e-0773
pre-chordal neural plate2.51e-0749
ectoderm-derived structure8.97e-0795
ectoderm8.97e-0795
presumptive ectoderm8.97e-0795
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr1:178744297..178744320,-&oldid=3881665"