FFCP PHASE1:Mm9::chr1:182926224..182926235,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=859|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:182926224..182926235,-|id=chr1:182926224..182926235,-|ontology_enrichment_celltype=CL:0000219!1.75e-12!54;CL:0000548!5.35e-11!115;CL:0000004!5.35e-11!115;CL:0000255!5.35e-11!115;CL:0002371!2.52e-10!118;CL:0000144!1.09e-09!121;CL:0000012!1.09e-09!121;CL:0002453!3.62e-09!8;CL:0002320!5.71e-09!46;CL:0000134!5.71e-09!46;CL:0000723!1.67e-08!91;CL:0000048!1.67e-08!91;CL:0000222!5.08e-08!7;CL:0000063!7.73e-08!66;CL:0002321!1.09e-07!70;CL:0000220!1.09e-07!70;CL:0000680!2.03e-07!6;CL:0000183!2.03e-07!6;CL:0000187!2.03e-07!6;CL:0000056!2.03e-07!6;CL:0000128!2.41e-07!6;CL:0000126!2.41e-07!6;CL:0000127!2.41e-07!6;CL:0000034!2.91e-07!97;CL:0000333!7.29e-07!10;CL:0000095!7.29e-07!10;CL:0000243!7.29e-07!10;CL:0000123!7.29e-07!10;CL:0000125!7.29e-07!10;CL:0000030!7.29e-07!10;CL:0000339!7.29e-07!10|ontology_enrichment_celltype_v019_2=CL:0002453,1.77e-19,8;CL:0000128,2.13e-19,6;CL:0000126,2.13e-19,6;CL:0000127,2.13e-19,6;CL:0000333,1.99e-15,10;CL:0000095,1.99e-15,10;CL:0000243,1.99e-15,10;CL:0000123,1.99e-15,10;CL:0000125,1.99e-15,10;CL:0000030,1.99e-15,10;CL:0000339,1.99e-15,10;CL:0002321,3.72e-14,70;CL:0000219,1.03e-11,54;CL:0000192,1.35e-11,3;CL:0000359,1.35e-11,3;CL:0002539,1.35e-11,3;CL:0000514,1.35e-11,3;CL:0000680,9.54e-10,6;CL:0000187,9.54e-10,6;CL:0000056,9.54e-10,6;CL:0000222,2.31e-08,7;CL:0002605,1.53e-07,2;CL:0002604,1.53e-07,2;CL:0002603,1.66e-07,2;CL:0000182,2.51e-07,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005256!4.08e-09!47;UBERON:0002384!5.71e-09!46;UBERON:0003914!2.98e-07!47|ontology_enrichment_uberon_v019_2=UBERON:0001135,1.35e-11,3;UBERON:0004237,1.35e-11,3;UBERON:0004695,1.35e-11,3;UBERON:0002111,1.35e-11,3;UBERON:0004178,1.35e-11,3;UBERON:0000947,8.37e-09,4;UBERON:0001637,8.37e-09,4;UBERON:0004573,8.37e-09,4;UBERON:0003509,8.37e-09,4;UBERON:0004571,8.37e-09,4;UBERON:0010191,8.37e-09,4;UBERON:0004572,8.37e-09,4;UBERON:0000055,4.04e-07,5;UBERON:0007500,4.04e-07,5;UBERON:0001981,4.04e-07,5;UBERON:0002049,4.04e-07,5;UBERON:0007798,4.04e-07,5;UBERON:0004537,4.04e-07,5;UBERON:0006965,4.04e-07,5|phase1_expression=0.160148847104794,0,0.454999239389536,0,0,0,0,0.903863264091034,0.281577444303333,0.936258105287974,0,0.0797721589953364,0,0.174840804837995,0,0,0,0.630924330716475,0.137114433605739,0,0.255129870453209,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,5.79125362687656,4.1564541800001,1.46837401729345,1.56478268869608,1.30815093828268,1.09843091367236,2.13872888981712,1.81982348112971,1.43752564364972,0.838913030288682,2.17608642603403,0,0.771778308107841,0.85960031981627,1.54701627683233,0.202316460859598,0,0,0.338844532069132,2.66788438833342,0.449949858640699,1.97773272513395,3.5524005747305,0.898800331555214,1.53687322128622,0.103689612308478,0,0,0,0,0,0,0,2.20231761998777,0,0,0,0,0,0.279182999001381,0.56276261003168,0,0,0,0,0,0,0.289864488701678,2.58127163094416,0.679971333707751,4.31762553310254,5.19821133958135,2.24013443548668,0,0.681721290312231,0.519572009205738,0.70667914902068,0,2.56652954828636,0,0,0,1.26679932737549,1.01104889002957,0.11418387971906,0.258937883647172,0.445326417194474,0,0,0,0.150722640552623,0.23517741427141,0.376999773989026,0,0.433798070759735,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0.123397163921801,0.592905254174298,0,0,0,0,0,0,0,0.162135226775035,0,2.87536413054709,0,0.312037673114561,0.252578877947112,1.61457672169721,0.482443521363367,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0.327869890753351,0,0,0.780877488593277,0,0,0,0,1.21443210502468,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0.0603129249281559,0.119372344003136,0.164140899745061,0,0,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0,0,0,0,0.165306911450672,0,0,0.621339313086926,0,0.149516546043979,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0.226730383615211,0,0,0,0.386379188064381,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0.0640251524048693,0,0,0.115884325944855,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0|short_description=p@chr1:182926224..182926235,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=859 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:182926224..182926235,- | |||
|description=CAGE_peak_at_chr1:182926224..182926235,- | |||
|id=chr1:182926224..182926235,- | |||
|ontology_enrichment_celltype=CL:0000219!1.75e-12!54;CL:0000548!5.35e-11!115;CL:0000004!5.35e-11!115;CL:0000255!5.35e-11!115;CL:0002371!2.52e-10!118;CL:0000144!1.09e-09!121;CL:0000012!1.09e-09!121;CL:0002453!3.62e-09!8;CL:0002320!5.71e-09!46;CL:0000134!5.71e-09!46;CL:0000723!1.67e-08!91;CL:0000048!1.67e-08!91;CL:0000222!5.08e-08!7;CL:0000063!7.73e-08!66;CL:0002321!1.09e-07!70;CL:0000220!1.09e-07!70;CL:0000680!2.03e-07!6;CL:0000183!2.03e-07!6;CL:0000187!2.03e-07!6;CL:0000056!2.03e-07!6;CL:0000128!2.41e-07!6;CL:0000126!2.41e-07!6;CL:0000127!2.41e-07!6;CL:0000034!2.91e-07!97;CL:0000333!7.29e-07!10;CL:0000095!7.29e-07!10;CL:0000243!7.29e-07!10;CL:0000123!7.29e-07!10;CL:0000125!7.29e-07!10;CL:0000030!7.29e-07!10;CL:0000339!7.29e-07!10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,1.77e-19,8;CL:0000128,2.13e-19,6;CL:0000126,2.13e-19,6;CL:0000127,2.13e-19,6;CL:0000333,1.99e-15,10;CL:0000095,1.99e-15,10;CL:0000243,1.99e-15,10;CL:0000123,1.99e-15,10;CL:0000125,1.99e-15,10;CL:0000030,1.99e-15,10;CL:0000339,1.99e-15,10;CL:0002321,3.72e-14,70;CL:0000219,1.03e-11,54;CL:0000192,1.35e-11,3;CL:0000359,1.35e-11,3;CL:0002539,1.35e-11,3;CL:0000514,1.35e-11,3;CL:0000680,9.54e-10,6;CL:0000187,9.54e-10,6;CL:0000056,9.54e-10,6;CL:0000222,2.31e-08,7;CL:0002605,1.53e-07,2;CL:0002604,1.53e-07,2;CL:0002603,1.66e-07,2;CL:0000182,2.51e-07,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!4.08e-09!47;UBERON:0002384!5.71e-09!46;UBERON:0003914!2.98e-07!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,1.35e-11,3;UBERON:0004237,1.35e-11,3;UBERON:0004695,1.35e-11,3;UBERON:0002111,1.35e-11,3;UBERON:0004178,1.35e-11,3;UBERON:0000947,8.37e-09,4;UBERON:0001637,8.37e-09,4;UBERON:0004573,8.37e-09,4;UBERON:0003509,8.37e-09,4;UBERON:0004571,8.37e-09,4;UBERON:0010191,8.37e-09,4;UBERON:0004572,8.37e-09,4;UBERON:0000055,4.04e-07,5;UBERON:0007500,4.04e-07,5;UBERON:0001981,4.04e-07,5;UBERON:0002049,4.04e-07,5;UBERON:0007798,4.04e-07,5;UBERON:0004537,4.04e-07,5;UBERON:0006965,4.04e-07,5 | |||
|phase1_expression=0.160148847104794,0,0.454999239389536,0,0,0,0,0.903863264091034,0.281577444303333,0.936258105287974,0,0.0797721589953364,0,0.174840804837995,0,0,0,0.630924330716475,0.137114433605739,0,0.255129870453209,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,5.79125362687656,4.1564541800001,1.46837401729345,1.56478268869608,1.30815093828268,1.09843091367236,2.13872888981712,1.81982348112971,1.43752564364972,0.838913030288682,2.17608642603403,0,0.771778308107841,0.85960031981627,1.54701627683233,0.202316460859598,0,0,0.338844532069132,2.66788438833342,0.449949858640699,1.97773272513395,3.5524005747305,0.898800331555214,1.53687322128622,0.103689612308478,0,0,0,0,0,0,0,2.20231761998777,0,0,0,0,0,0.279182999001381,0.56276261003168,0,0,0,0,0,0,0.289864488701678,2.58127163094416,0.679971333707751,4.31762553310254,5.19821133958135,2.24013443548668,0,0.681721290312231,0.519572009205738,0.70667914902068,0,2.56652954828636,0,0,0,1.26679932737549,1.01104889002957,0.11418387971906,0.258937883647172,0.445326417194474,0,0,0,0.150722640552623,0.23517741427141,0.376999773989026,0,0.433798070759735,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0.123397163921801,0.592905254174298,0,0,0,0,0,0,0,0.162135226775035,0,2.87536413054709,0,0.312037673114561,0.252578877947112,1.61457672169721,0.482443521363367,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0.327869890753351,0,0,0.780877488593277,0,0,0,0,1.21443210502468,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0.0603129249281559,0.119372344003136,0.164140899745061,0,0,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0,0,0,0,0.165306911450672,0,0,0.621339313086926,0,0.149516546043979,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0.226730383615211,0,0,0,0.386379188064381,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0.0640251524048693,0,0,0.115884325944855,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0 | |||
|short_description=p@chr1:182926224..182926235,- | |||
}} |
Latest revision as of 10:16, 5 August 2015
Short description: | p@chr1:182926224..182926235, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:182926224..182926235, - |
Coexpression cluster: | MCL_coexpression_mm9:859 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 1.77e-19 | 8 |
oligodendrocyte | 2.13e-19 | 6 |
macroglial cell | 2.13e-19 | 6 |
astrocyte | 2.13e-19 | 6 |
migratory neural crest cell | 1.99e-15 | 10 |
neuron associated cell | 1.99e-15 | 10 |
glial cell (sensu Vertebrata) | 1.99e-15 | 10 |
neuron associated cell (sensu Vertebrata) | 1.99e-15 | 10 |
glial cell | 1.99e-15 | 10 |
glioblast | 1.99e-15 | 10 |
glioblast (sensu Vertebrata) | 1.99e-15 | 10 |
embryonic cell | 3.72e-14 | 70 |
motile cell | 1.03e-11 | 54 |
smooth muscle cell | 1.35e-11 | 3 |
vascular associated smooth muscle cell | 1.35e-11 | 3 |
aortic smooth muscle cell | 1.35e-11 | 3 |
smooth muscle myoblast | 1.35e-11 | 3 |
muscle precursor cell | 9.54e-10 | 6 |
muscle cell | 9.54e-10 | 6 |
myoblast | 9.54e-10 | 6 |
mesodermal cell | 2.31e-08 | 7 |
astrocyte of the cerebral cortex | 1.53e-07 | 2 |
astrocyte of the hippocampus | 1.53e-07 | 2 |
astrocyte of the cerebellum | 1.66e-07 | 2 |
hepatocyte | 2.51e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 1.35e-11 | 3 |
blood vessel smooth muscle | 1.35e-11 | 3 |
arterial system smooth muscle | 1.35e-11 | 3 |
artery smooth muscle tissue | 1.35e-11 | 3 |
aorta smooth muscle tissue | 1.35e-11 | 3 |
aorta | 8.37e-09 | 4 |
artery | 8.37e-09 | 4 |
systemic artery | 8.37e-09 | 4 |
arterial blood vessel | 8.37e-09 | 4 |
systemic arterial system | 8.37e-09 | 4 |
aortic system | 8.37e-09 | 4 |
arterial system | 8.37e-09 | 4 |
vessel | 4.04e-07 | 5 |
epithelial tube open at both ends | 4.04e-07 | 5 |
blood vessel | 4.04e-07 | 5 |
vasculature | 4.04e-07 | 5 |
vascular system | 4.04e-07 | 5 |
blood vasculature | 4.04e-07 | 5 |
vascular cord | 4.04e-07 | 5 |