FFCP PHASE1:Hg19::chr6:32489707..32489737,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3127 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=4953 | |||
|TSSclassifier=strong | |||
|UniProt=Q29973,Q30009 | |||
|association_with_transcript=96bp_to_M16086,M30182_5end | |||
|description=CAGE_peak_6_at_HLA-DRB5_5end | |||
|id=chr6:32489707..32489737,- | |||
|ontology_enrichment_celltype=CL:0002087!9.65e-37!119;CL:0000738!2.95e-36!140;CL:0002009!1.07e-33!65;CL:0002031!2.54e-33!124;CL:0002194!1.93e-31!63;CL:0000576!1.93e-31!63;CL:0000040!1.93e-31!63;CL:0000559!1.93e-31!63;CL:0000557!8.19e-31!71;CL:0000037!3.04e-28!172;CL:0000566!3.04e-28!172;CL:0000839!5.09e-28!70;CL:0002032!2.41e-26!165;CL:0000837!2.41e-26!165;CL:0000988!4.20e-26!182;CL:0000766!1.22e-25!76;CL:0002057!2.81e-25!42;CL:0000860!8.80e-23!45;CL:0000763!7.53e-20!112;CL:0000049!7.53e-20!112;CL:0000990!1.96e-12!8;CL:0000451!1.16e-09!10;CL:0000840!8.77e-09!5;CL:0001029!8.77e-09!5;CL:0000453!8.81e-08!5;CL:0000134!5.13e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000990;5.05e-32;8!CL:0000451;5.65e-26;10!CL:0000453;4.01e-23;5!CL:0000840;1.57e-19;5!CL:0000473;1.59e-19;39!CL:0000234;1.59e-19;39!CL:0000860;2.81e-16;33!CL:0002057;2.81e-16;33!CL:0000235;1.15e-12;6!CL:0000576;2.99e-12;48!CL:0000766;5.06e-12;69!CL:0001014;2.05e-10;2!CL:0001016;2.05e-10;2!CL:0000738;1.40e-09;136!CL:0002393;3.02e-07;6!CL:0002397;3.02e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,4.17e-41,61;CL:0000557,5.86e-37,67;CL:0002194,1.44e-35,59;CL:0000576,1.44e-35,59;CL:0000040,1.44e-35,59;CL:0000559,1.44e-35,59;CL:0000473,7.30e-34,48;CL:0000234,7.30e-34,48;CL:0000990,1.83e-32,8;CL:0000738,5.23e-32,136;CL:0000839,2.79e-31,66;CL:0000766,2.92e-28,72;CL:0002031,6.91e-28,120;CL:0002087,3.95e-27,115;CL:0000763,4.53e-27,108;CL:0000049,4.53e-27,108;CL:0000451,2.48e-26,10;CL:0000037,1.53e-24,168;CL:0000860,1.60e-24,42;CL:0002057,1.60e-24,42;CL:0002032,4.11e-24,161;CL:0000837,4.11e-24,161;CL:0000453,2.07e-23,5;CL:0000988,6.34e-23,177;CL:0000840,8.55e-20,5;CL:0001029,8.55e-20,5;CL:0000235,1.16e-12,6;CL:0001014,1.59e-10,2;CL:0001016,1.59e-10,2;CL:0000134,2.60e-09,354;CL:0002320,5.55e-09,361;CL:0002393,5.70e-08,9;CL:0002397,5.70e-08,9;CL:0000219,7.95e-08,386 | |||
|ontology_enrichment_development_v019=CL:0002057;4.42e-19;42!CL:0000049;3.01e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.06e-30!102;UBERON:0003061!2.06e-30!102;UBERON:0002371!6.11e-28!80;UBERON:0002193!6.41e-28!112;UBERON:0001474!9.38e-25!86;UBERON:0002405!2.59e-22!115;UBERON:0004765!1.55e-18!101;UBERON:0001434!1.55e-18!101;UBERON:0003081!1.72e-10!216;UBERON:0002204!3.39e-07!167;UBERON:0007023!5.56e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.99e-32,76;UBERON:0001474,3.25e-29,82;UBERON:0002390,6.05e-28,98;UBERON:0003061,6.05e-28,98;UBERON:0002405,2.50e-27,93;UBERON:0004765,3.96e-26,90;UBERON:0002193,8.32e-25,108;UBERON:0001434,5.82e-23,100;UBERON:0002204,1.65e-11,167;UBERON:0003081,2.16e-11,203;UBERON:0002384,1.56e-08,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.0821005894499457,0.0787107813136792,0,0,0.154816123316076,0,0,0,0,0,0.587200878669695,0,1.20326668482085,0.217010870715852,0.223915474239924,0.971680998056939,0.77272670290256,0.145398238779565,1.51150377475524,0,1.16214518452842,3.70051099219643,0.309706370895104,0.28769239232215,7.17249978281482,0.47296445977717,0,0,1.35426486594342,0.376484679085209,2.45615535052061,0.674170453335254,2.14258724659632,2.56743221660875,0,1.64925650093358,8.57693727773017,0.852449501065388,0,0.56738522469114,0,0.75374599577023,8.86520961314342,0.217188844705117,0.605399502633369,1.47311054395026,0.632924774881769,1.05627643155971,1.06302149982522,0,0.561643155732475,0.450530678524519,0.16072558669708,1.42506371870624,0.79566670879636,0,3.51992488922645,0,2.66852776159066,1.70692089026603,1.20118796110804,0.574752439954483,0,0.954053754535364,0,0,0.764546456250458,0,1.12101712596307,0,0,0,0,0,0,0,0,0.111410456885174,0,0.221533894583621,0,0.25618263945135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0.127986611154418,0,0.236777252044017,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.130979075497713,0,0,1.9472843619281,2.26368658489047,5.58423434179234,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0.518305275076852,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96973604869918,0.936017060556951,0.891786973732369,0,0,0,0,0,0,0,0,0,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,2.43247561282381,1.00451418286425,6.32501818449095,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,1.94142780736755,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.476463550915578,0.411362273086194,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0.201799707191048,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0.66866030566487,0,0.23874448473769,0.296964680832639,0.307160702099232,0,0,0,0.329607748453519,0,0,0.276283915531148,0,0,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,1.5625665665114,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0.221158519862449,0,0,0,0,0,1.02547850262301,0,0,0.108647371922008,0.957003479195758,0,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0.313265848516366,0.067401132980677,0,0,0,0,0,0.789168805698781,0,0,0.063186579628488,0.450970258243478,0.72581733978073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0.0801588202515337,0.213452994739353,0.19980960958213,0,0,0,0.432164393964449,0,0,0,0,0,0,0,0,0,0,0.788662062837943,0.279282401272254,0.229160424011684,0,1.19807400299395,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0.0846733320657845,0,0.136203406111576,0,0,0,1.5748172408605,6.1904156364636,0,0,0.394028536495991,0,0,0.179287339332845,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.854299300541557,0.471612915298998,0.414239055347196,0.496166021811951,0,0,0,0.544017803369474,0,0,0.655745261419609,0,0,0,0.500763722825999,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318593534327405,0,0.465788870628778,0,0,0,0.601030435988874,0,0,0,0.322231671127465,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.67664741214532,1.86010776438708,1.30852315404675,0,0,0,1.79988656269437,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.0887023701626388,0.460935950223117,0,0.203909198930495,0,0,0,0,0,7.00680408284473,0,0,1.43325506366115,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0.196300467230486,0,0.647428837187895,0,0,0,0,0,0,0,0,8.15199355260037,0.154348316215889,0,0,0.245148321753905,0.707029641304878,0,0,0,0,1.03382309777839,0.128915775947154,0.199882311849858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250707539292375,0.454672189309436,0.267964130156178,0,0.20686599172379,0.639701945702943,0,0.193766729508018,0.372448285775147,0,0.190941474834495,0,0.217716747896961,0.342233301085281,0.0673520530145875,0.215166616178029,0,0,0.106727345877715,0,0,0,0,0.406896178315738,0,1.00636896795513,0 | |||
|short_description=p6@HLA-DRB5 | |||
}} |
Revision as of 11:15, 22 January 2014
Short description: | p6@HLA-DRB5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_HLA-DRB5_5end |
Coexpression cluster: | NA |
Association with transcript: | 96bp_to_M16086, M30182_5end |
EntrezGene: | HLA-DRB5 |
HGNC: | 4953 |
UniProt: | Q29973Q30009 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.99e-32 | 76 |
bone element | 3.25e-29 | 82 |
hematopoietic system | 6.05e-28 | 98 |
blood island | 6.05e-28 | 98 |
immune system | 2.50e-27 | 93 |
skeletal element | 3.96e-26 | 90 |
hemolymphoid system | 8.32e-25 | 108 |
skeletal system | 5.82e-23 | 100 |
musculoskeletal system | 1.65e-11 | 167 |
lateral plate mesoderm | 2.16e-11 | 203 |
connective tissue | 1.56e-08 | 371 |