FFCP PHASE1:Hg19::chr6:36665624..36665632,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc010jwl.1_5end | |||
|coexpression_cluster_id=C1812 | |||
|description=CAGE_peak_2_at_uc010jwl.1_5end | |||
|id=chr6:36665624..36665632,+ | |||
|ontology_enrichment_celltype=CL:0000763!1.66e-67!112;CL:0000049!1.66e-67!112;CL:0000037!8.99e-50!172;CL:0000566!8.99e-50!172;CL:0000988!6.07e-46!182;CL:0002032!7.74e-46!165;CL:0000837!7.74e-46!165;CL:0000766!2.73e-42!76;CL:0000839!7.26e-33!70;CL:0002057!8.97e-32!42;CL:0000557!1.67e-30!71;CL:0000860!4.46e-29!45;CL:0000738!5.29e-25!140;CL:0002194!8.31e-23!63;CL:0000576!8.31e-23!63;CL:0000040!8.31e-23!63;CL:0000559!8.31e-23!63;CL:0002009!7.76e-22!65;CL:0002031!8.47e-18!124;CL:0000094!5.34e-17!8;CL:0002087!4.38e-14!119;CL:0000134!8.72e-14!358;CL:0002320!3.65e-13!365;CL:0002274!3.68e-12!5;CL:0000457!3.68e-12!5;CL:0002191!3.68e-12!5;CL:0000097!3.68e-12!5;CL:0000831!3.68e-12!5;CL:0002028!3.68e-12!5;CL:0000081!6.85e-12!11;CL:0000219!5.43e-11!390;CL:0002393!1.19e-09!9;CL:0002397!1.19e-09!9;CL:0000034!1.06e-08!444;CL:0000048!1.91e-08!430;CL:0000723!4.34e-08!436;CL:0000775!1.30e-07!3;CL:0000767!5.70e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000094;5.46e-26;8!CL:0000097;8.31e-23;5!CL:0000081;1.21e-18;11!CL:0000763;1.65e-14;100!CL:0000775;9.46e-14;3!CL:0000163;1.53e-12;9!CL:0000766;5.89e-10;69!CL:0000771;5.92e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.80e-38,108;CL:0000049,1.80e-38,108;CL:0000094,6.73e-26,8;CL:0000037,2.83e-25,168;CL:0000988,1.36e-23,177;CL:0002032,2.34e-23,161;CL:0000837,2.34e-23,161;CL:0000766,5.27e-23,72;CL:0000097,7.13e-23,5;CL:0002028,7.13e-23,5;CL:0000081,1.40e-18,11;CL:0000775,9.89e-14,3;CL:0000163,1.40e-12,9;CL:0000557,2.36e-12,67;CL:0000738,5.43e-11,136;CL:0000839,7.92e-11,66;CL:0000771,5.42e-10,2;CL:0000134,7.10e-08,354;CL:0002320,1.42e-07,361 | |||
|ontology_enrichment_development_v019=CL:0000049;4.50e-10;108 | |||
|ontology_enrichment_disease=DOID:8692!7.36e-28!31;DOID:1240!8.77e-23!39;DOID:2531!7.91e-16!51;DOID:0060083!7.91e-16!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.84e-17;31!DOID:1240;1.69e-11;39!DOID:2531;4.05e-07;51!DOID:0060083;4.05e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,5.74e-18,31;DOID:1240,9.43e-14,39;DOID:2531,6.37e-10,51;DOID:0060083,6.37e-10,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!4.25e-44!102;UBERON:0003061!4.25e-44!102;UBERON:0002193!8.56e-39!112;UBERON:0002371!1.36e-27!80;UBERON:0001474!6.73e-25!86;UBERON:0002405!3.16e-20!115;UBERON:0004765!1.38e-19!101;UBERON:0001434!1.38e-19!101;UBERON:0000178!7.87e-16!15;UBERON:0000179!7.87e-16!15;UBERON:0000463!7.87e-16!15;UBERON:0003081!8.92e-14!216;UBERON:0002384!2.55e-12!375;UBERON:0002204!6.48e-08!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.82e-22;15!UBERON:0000179;6.82e-22;15!UBERON:0000463;6.82e-22;15!UBERON:0002390;1.13e-13;32!UBERON:0002193;5.84e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.42e-23,98;UBERON:0003061,5.42e-23,98;UBERON:0000178,6.67e-22,15;UBERON:0000179,6.67e-22,15;UBERON:0000463,6.67e-22,15;UBERON:0002193,2.56e-20,108;UBERON:0002371,5.63e-12,76;UBERON:0001474,7.74e-11,82;UBERON:0004765,1.47e-09,90;UBERON:0002405,3.90e-09,93;UBERON:0001434,2.99e-08,100;UBERON:0003081,4.21e-08,203;UBERON:0002384,3.67e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.32700704533794,1.15148819429164,0.309632246632152,0,0,0,0,0,1.17440175733939,1.66198622559563,0.200544447470142,0.217010870715852,0,0,0,0.581592955118259,0.755751887377619,0.727752183563449,0.464858073811369,0,1.54853185447552,0.575384784644301,1.0246428261164,0.47296445977717,0.344745680736619,0,0,0.376484679085209,0,0,0.306083892370903,0,1.91801137739712,0,0.398927315243264,0,0.580418477257168,0,0,0.502497330513487,0.521482918420201,1.3031330682307,0,0.368277635987565,0.316462387440884,0.845021145247767,0.212604299965044,1.25795187305026,1.46027220490444,1.05123824989054,1.6072558669708,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,0,2.10707267820062,0,0,0,0,0,0,0,0.111410456885174,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255973222308837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,7.75560528296651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46331618947972,3.96217953059517,11.6103744702832,17.8708742237032,6.9433338384509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,3.74503511973591,5.9832291840805,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,1.2942852049117,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.877039506583738,0.784306353074702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.04468565539302,8.41100927856613,6.26611905891579,2.62054953003568,1.23408681925858,1.94541993357815,3.7802200606668,3.17250070517708,0,0,0,0,0,0,0.318852545457645,4.59032554295478,0.766021480529467,0.423347165447766,3.24621940274555,3.36956613736151,0,4.54371697741767,2.50634477090067,0,0.1605880751037,0.605399121573143,0.425846237690326,8.58763361889412,0.614481528616916,0.447352215784832,1.16794399198336,4.10315000344285,0,0,0.811367035427949,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.06943422136123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.16297333254129,3.8228686837036,0,0,0,0,0.953619473882272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.94226116468806,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,1.31348033198942,0,0,0,0,0,0,0,0,0.213574825135389,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02714286418868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.257831551894309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0.193766729508018,0.31037357147929,0,0,0,0.217716747896961,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@uc010jwl.1 | |||
}} |
Revision as of 11:40, 22 January 2014
Short description: | p2@uc010jwl.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_uc010jwl.1_5end |
Coexpression cluster: | C1812_Mast_granulocyte_acute_Eosinophils_chronic_Basophils_CD133 |
Association with transcript: | 0bp_to_uc010jwl.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.80e-38 | 108 |
common myeloid progenitor | 1.80e-38 | 108 |
granulocyte | 6.73e-26 | 8 |
hematopoietic stem cell | 2.83e-25 | 168 |
hematopoietic cell | 1.36e-23 | 177 |
hematopoietic oligopotent progenitor cell | 2.34e-23 | 161 |
hematopoietic multipotent progenitor cell | 2.34e-23 | 161 |
myeloid leukocyte | 5.27e-23 | 72 |
mast cell | 7.13e-23 | 5 |
basophil mast progenitor cell | 7.13e-23 | 5 |
blood cell | 1.40e-18 | 11 |
neutrophil | 9.89e-14 | 3 |
endocrine cell | 1.40e-12 | 9 |
granulocyte monocyte progenitor cell | 2.36e-12 | 67 |
leukocyte | 5.43e-11 | 136 |
myeloid lineage restricted progenitor cell | 7.92e-11 | 66 |
eosinophil | 5.42e-10 | 2 |
mesenchymal cell | 7.10e-08 | 354 |
connective tissue cell | 1.42e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.42e-23 | 98 |
blood island | 5.42e-23 | 98 |
blood | 6.67e-22 | 15 |
haemolymphatic fluid | 6.67e-22 | 15 |
organism substance | 6.67e-22 | 15 |
hemolymphoid system | 2.56e-20 | 108 |
bone marrow | 5.63e-12 | 76 |
bone element | 7.74e-11 | 82 |
skeletal element | 1.47e-09 | 90 |
immune system | 3.90e-09 | 93 |
skeletal system | 2.99e-08 | 100 |
lateral plate mesoderm | 4.21e-08 | 203 |
connective tissue | 3.67e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 5.74e-18 | 31 |
leukemia | 9.43e-14 | 39 |
hematologic cancer | 6.37e-10 | 51 |
immune system cancer | 6.37e-10 | 51 |