FFCP PHASE1:Hg19::chr6:41021073..41021078,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10930 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=605 | |||
|TSSclassifier=strong | |||
|UniProt=B4DUL0 | |||
|association_with_transcript=12bp_to_ENST00000426505_5end | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_4_at_APOBEC2_5end | |||
|id=chr6:41021073..41021078,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;5.84e-19;4!UBERON:0007284;5.84e-19;4!UBERON:0010226;6.31e-10;1!UBERON:0004874;8.17e-10;1!UBERON:0004140;1.01e-09;1!UBERON:0010227;1.20e-09;1!UBERON:0003104;5.07e-09;31!UBERON:0006603;1.46e-08;65 | |||
|ontology_enrichment_disease=DOID:114!9.41e-11!2 | |||
|ontology_enrichment_disease_v019=DOID:114;7.75e-18;2!DOID:178;1.01e-09;1!DOID:326;1.01e-09;1!DOID:3978;1.01e-09;1!DOID:3394;1.01e-09;1!DOID:5844;1.01e-09;1!DOID:1287;2.22e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,7.43e-18,2;DOID:178,9.70e-10,1;DOID:326,9.70e-10,1;DOID:3978,9.70e-10,1;DOID:3394,9.70e-10,1;DOID:5844,9.70e-10,1;DOID:1287,2.17e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.47e-19!115;UBERON:0004151!5.23e-15!3;UBERON:0003978!7.62e-15!3;UBERON:0009751!7.62e-15!3;UBERON:0000946!7.62e-15!3;UBERON:0002523!7.62e-15!3;UBERON:0005983!7.62e-15!3;UBERON:0002165!7.62e-15!3;UBERON:0002062!7.62e-15!3;UBERON:0007280!7.62e-15!3;UBERON:0003103!7.57e-14!69;UBERON:0007100!7.16e-13!27;UBERON:0001042!1.55e-11!10;UBERON:0009145!1.55e-11!10;UBERON:0001630!4.79e-11!2;UBERON:0005090!4.79e-11!2;UBERON:0000341!1.14e-10!2;UBERON:0008814!1.58e-10!15;UBERON:0006562!1.84e-10!11;UBERON:0002081!2.01e-10!2;UBERON:0002133!2.42e-10!2;UBERON:0003127!4.86e-10!2;UBERON:0001723!1.26e-07!3;UBERON:0001033!1.26e-07!3;UBERON:0010056!1.26e-07!3;UBERON:0000974!1.53e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.12e-25;25!UBERON:0004151;1.87e-25;3!UBERON:0003978;4.69e-25;3!UBERON:0000946;4.69e-25;3!UBERON:0005090;2.24e-18;2!UBERON:0001630;2.24e-18;2!UBERON:0000341;9.99e-18;2!UBERON:0002081;2.62e-17;2!UBERON:0002133;4.69e-17;2!UBERON:0001134;3.46e-13;16!UBERON:0002036;3.46e-13;16!UBERON:0000948;4.16e-13;22!UBERON:0001723;1.53e-12;3!UBERON:0001033;1.53e-12;3!UBERON:0001389;4.09e-10;1!UBERON:0000026;4.09e-10;1!UBERON:0008784;4.09e-10;1!UBERON:0006058;4.09e-10;1!UBERON:0003663;4.09e-10;1!UBERON:0004256;4.09e-10;1!UBERON:0004708;4.09e-10;1!UBERON:0002101;4.09e-10;1!UBERON:0004709;4.09e-10;1!UBERON:0002529;4.09e-10;1!UBERON:0010538;4.09e-10;1!UBERON:0003661;4.09e-10;1!UBERON:0010890;4.09e-10;1!UBERON:0002471;4.09e-10;1!UBERON:0001383;4.09e-10;1!UBERON:0010758;4.09e-10;1!UBERON:0010707;4.09e-10;1!UBERON:0000978;4.09e-10;1!UBERON:0002103;4.09e-10;1!UBERON:0001665;4.09e-10;1!UBERON:0003823;4.09e-10;1!UBERON:0000154;4.09e-10;1!UBERON:0010709;4.09e-10;1!UBERON:0002426;5.31e-10;1!UBERON:0003831;5.31e-10;1!UBERON:0003898;5.31e-10;1!UBERON:0004830;5.31e-10;1!UBERON:0003830;5.31e-10;1!UBERON:0005175;5.31e-10;1!UBERON:0001774;5.31e-10;1!UBERON:0001103;5.31e-10;1!UBERON:0002084;6.31e-10;1!UBERON:0002082;6.31e-10;1!UBERON:0000989;8.17e-10;1!UBERON:0008811;8.17e-10;1!UBERON:0002146;8.91e-10;1!UBERON:0005623;8.91e-10;1!UBERON:0002079;1.20e-09;1!UBERON:0007029;1.55e-09;1!UBERON:0002372;2.17e-09;1!UBERON:0002135;2.17e-09;1!UBERON:0002134;2.17e-09;1!UBERON:0001301;2.17e-09;1!UBERON:0001961;2.17e-09;1!UBERON:0001744;2.17e-09;1!UBERON:0005208;2.17e-09;1!UBERON:0004145;2.17e-09;1!UBERON:0005946;2.17e-09;1!UBERON:0001042;2.17e-09;1!UBERON:0005965;2.17e-09;1!UBERON:0001735;2.17e-09;1!UBERON:0002078;2.17e-09;1!UBERON:0010313;6.52e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,2.04e-25,3;UBERON:0003978,3.97e-25,3;UBERON:0009751,3.97e-25,3;UBERON:0000946,3.97e-25,3;UBERON:0002523,3.97e-25,3;UBERON:0005983,3.97e-25,3;UBERON:0002165,3.97e-25,3;UBERON:0002062,3.97e-25,3;UBERON:0007280,3.97e-25,3;UBERON:0007100,1.06e-23,27;UBERON:0003103,1.90e-18,68;UBERON:0005090,2.24e-18,2;UBERON:0001630,2.24e-18,2;UBERON:0000341,1.04e-17,2;UBERON:0002081,2.85e-17,2;UBERON:0010227,2.85e-17,2;UBERON:0002133,3.98e-17,2;UBERON:0007023,7.31e-14,114;UBERON:0001723,1.44e-12,3;UBERON:0001033,1.44e-12,3;UBERON:0010056,1.44e-12,3;UBERON:0000948,5.49e-12,24;UBERON:0005498,5.49e-12,24;UBERON:0004140,5.49e-12,24;UBERON:0009881,5.49e-12,24;UBERON:0004141,5.49e-12,24;UBERON:0003084,5.49e-12,24;UBERON:0007005,5.49e-12,24;UBERON:0004139,5.49e-12,24;UBERON:0004291,5.49e-12,24;UBERON:0004797,4.07e-11,7;UBERON:0005418,4.09e-10,1;UBERON:0001389,4.09e-10,1;UBERON:0000026,4.09e-10,1;UBERON:0008784,4.09e-10,1;UBERON:0006058,4.09e-10,1;UBERON:0003663,4.09e-10,1;UBERON:0004256,4.09e-10,1;UBERON:0004708,4.09e-10,1;UBERON:0002101,4.09e-10,1;UBERON:0004709,4.09e-10,1;UBERON:0002529,4.09e-10,1;UBERON:0010538,4.09e-10,1;UBERON:0003661,4.09e-10,1;UBERON:0010890,4.09e-10,1;UBERON:0002471,4.09e-10,1;UBERON:0001383,4.09e-10,1;UBERON:0004357,4.09e-10,1;UBERON:0004347,4.09e-10,1;UBERON:0005420,4.09e-10,1;UBERON:0005732,4.09e-10,1;UBERON:0010758,4.09e-10,1;UBERON:0010707,4.09e-10,1;UBERON:0000978,4.09e-10,1;UBERON:0002103,4.09e-10,1;UBERON:0001665,4.09e-10,1;UBERON:0003823,4.09e-10,1;UBERON:0000154,4.09e-10,1;UBERON:0010709,4.09e-10,1;UBERON:0005733,4.09e-10,1;UBERON:0005730,4.09e-10,1;UBERON:0002426,5.31e-10,1;UBERON:0003831,5.31e-10,1;UBERON:0003898,5.31e-10,1;UBERON:0004830,5.31e-10,1;UBERON:0003830,5.31e-10,1;UBERON:0005175,5.31e-10,1;UBERON:0001774,5.31e-10,1;UBERON:0001103,5.31e-10,1;UBERON:0010084,5.31e-10,1;UBERON:0002084,6.31e-10,1;UBERON:0002082,6.31e-10,1;UBERON:0010226,6.31e-10,1;UBERON:0000989,8.17e-10,1;UBERON:0008811,8.17e-10,1;UBERON:0006258,8.17e-10,1;UBERON:0005876,8.17e-10,1;UBERON:0004874,8.17e-10,1;UBERON:0002146,8.91e-10,1;UBERON:0005623,8.91e-10,1;UBERON:0002079,1.25e-09,1;UBERON:0007029,1.62e-09,1;UBERON:0002135,1.76e-09,1;UBERON:0002134,2.26e-09,1;UBERON:0005208,2.26e-09,1;UBERON:0005946,2.26e-09,1;UBERON:0005965,2.26e-09,1;UBERON:0002078,2.26e-09,1;UBERON:0002372,2.46e-09,1;UBERON:0001961,2.46e-09,1;UBERON:0001744,2.46e-09,1;UBERON:0001735,2.46e-09,1;UBERON:0001301,2.67e-09,1;UBERON:0001042,3.64e-08,10;UBERON:0009145,3.64e-08,10;UBERON:0010313,6.22e-08,10;UBERON:0002342,6.22e-08,10;UBERON:0005062,6.22e-08,10;UBERON:0006562,1.83e-07,11 | |||
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|short_description=p4@APOBEC2 | |||
}} |
Revision as of 11:50, 22 January 2014
Short description: | p4@APOBEC2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_APOBEC2_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 12bp_to_ENST00000426505_5end |
EntrezGene: | APOBEC2 |
HGNC: | 605 |
UniProt: | B4DUL0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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