FFCP PHASE1:Hg19::chr7:100148003..100148013,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3268 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5177 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-5bp_to_uc010lgy.2_5end | |||
|description=CAGE_peak_11_at_AGFG2_5end | |||
|id=chr7:100148003..100148013,+ | |||
|ontology_enrichment_celltype=CL:0000037!5.35e-12!172;CL:0000566!5.35e-12!172;CL:0000838!9.61e-12!52;CL:0000542!1.83e-11!53;CL:0000051!1.83e-11!53;CL:0000988!5.65e-11!182;CL:0002032!1.29e-10!165;CL:0000837!1.29e-10!165;CL:0000945!2.90e-09!24;CL:0000826!2.90e-09!24;CL:0000738!3.25e-09!140;CL:0002087!2.66e-07!119;CL:0002031!6.84e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0002127;8.10e-41;1!CL:0000911;8.10e-41;1!CL:0000814;8.10e-41;1!CL:0000775;1.31e-14;3!CL:0000791;7.58e-10;18!CL:0000789;7.58e-10;18!CL:0002419;7.58e-10;18!CL:0000084;2.31e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,9.91e-41,1;CL:0000914,9.91e-41,1;CL:0000911,9.91e-41,1;CL:0000814,9.91e-41,1;CL:0002042,9.91e-41,1;CL:0002039,9.91e-41,1;CL:0002040,9.91e-41,1;CL:0002041,9.91e-41,1;CL:0000893,3.81e-21,2;CL:0002489,3.81e-21,2;CL:0000809,3.81e-21,2;CL:0000808,3.81e-21,2;CL:0000894,3.81e-21,2;CL:0000806,3.81e-21,2;CL:0000807,3.81e-21,2;CL:0000805,3.81e-21,2;CL:0002425,3.81e-21,2;CL:0000775,1.22e-14,3;CL:0000791,7.42e-10,18;CL:0000789,7.42e-10,18;CL:0002420,7.42e-10,18;CL:0002419,7.42e-10,18;CL:0000790,7.42e-10,18;CL:0000084,2.28e-07,25;CL:0000827,2.28e-07,25 | |||
|ontology_enrichment_development_v019=CL:0002425;3.44e-21;2!CL:0000790;7.58e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!1.72e-09!4;UBERON:0005058!1.72e-09!4;UBERON:0009113!1.72e-09!4;UBERON:0003295!1.72e-09!4;UBERON:0005562!1.72e-09!4;UBERON:0004177!4.46e-09!7 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.80e-11,4;UBERON:0005058,2.80e-11,4;UBERON:0009113,2.80e-11,4;UBERON:0003295,2.80e-11,4;UBERON:0005562,2.80e-11,4;UBERON:0003351,5.92e-08,6;UBERON:0004177,5.38e-07,7;UBERON:0005057,5.38e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0.400395987036012,0,0.661044872784862,0.954053754535364,0,0,0,0,0,0,0,0,0,0.501559486172034,0,0,0,1.00269411196656,0,0,0,0.384273959177026,0.520237390239513,0.328875809207352,0.276350017785848,0.289803085735052,0,0.267540828089713,0,1.0197840842781,0,0.34362744548263,0,0.318565414324097,0,0,0,0.255973222308837,1.24930726552346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.69004345584465,0.197030760201927,0,0,0,0,0,0,0,0,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0.211673582723883,0,0,0.456469358066384,0,0,0.169291777801603,0.1605880751037,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0.194860308839388,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0.0645889098360061,0.31037357147929,0,0.0636471582781649,0,0,0,0.336760265072938,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0.320568492303233 | |||
|short_description=p11@AGFG2 | |||
}} |
Revision as of 18:18, 22 January 2014
Short description: | p11@AGFG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_AGFG2_5end |
Coexpression cluster: | NA |
Association with transcript: | -5bp_to_uc010lgy.2_5end |
EntrezGene: | AGFG2 |
HGNC: | 5177 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 9.91e-41 | 1 |
immature NK T cell | 9.91e-41 | 1 |
effector T cell | 9.91e-41 | 1 |
mature NK T cell | 9.91e-41 | 1 |
immature NK T cell stage IV | 9.91e-41 | 1 |
immature NK T cell stage I | 9.91e-41 | 1 |
immature NK T cell stage II | 9.91e-41 | 1 |
immature NK T cell stage III | 9.91e-41 | 1 |
thymocyte | 3.81e-21 | 2 |
double negative thymocyte | 3.81e-21 | 2 |
double-positive, alpha-beta thymocyte | 3.81e-21 | 2 |
DN4 thymocyte | 3.81e-21 | 2 |
DN1 thymic pro-T cell | 3.81e-21 | 2 |
DN2 thymocyte | 3.81e-21 | 2 |
DN3 thymocyte | 3.81e-21 | 2 |
immature single positive thymocyte | 3.81e-21 | 2 |
early T lineage precursor | 3.81e-21 | 2 |
neutrophil | 1.22e-14 | 3 |
mature alpha-beta T cell | 7.42e-10 | 18 |
alpha-beta T cell | 7.42e-10 | 18 |
immature T cell | 7.42e-10 | 18 |
mature T cell | 7.42e-10 | 18 |
immature alpha-beta T cell | 7.42e-10 | 18 |
T cell | 2.28e-07 | 25 |
pro-T cell | 2.28e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
thymus | 2.80e-11 | 4 |
hemolymphoid system gland | 2.80e-11 | 4 |
thymic region | 2.80e-11 | 4 |
pharyngeal gland | 2.80e-11 | 4 |
thymus primordium | 2.80e-11 | 4 |
pharyngeal epithelium | 5.92e-08 | 6 |
hemopoietic organ | 5.38e-07 | 7 |
immune organ | 5.38e-07 | 7 |