FFCP PHASE1:Hg19::chr7:18536090..18536130,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=9734 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14065 | |||
|TSSclassifier=weak | |||
|UniProt=C9JD56 | |||
|association_with_transcript=0bp_to_ENST00000441986_5end | |||
|coexpression_cluster_id=C38 | |||
|description=CAGE_peak_33_at_HDAC9_5end | |||
|id=chr7:18536090..18536130,+ | |||
|ontology_enrichment_celltype=CL:0000047!8.01e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0000138;1.22e-09;6!CL:0000153;7.48e-07;9!CL:0000447;7.48e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,1.22e-09,6;CL:0000138,1.22e-09,6;CL:0000153,7.48e-07,9;CL:0000447,7.48e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;1.46e-50;1!DOID:4549;1.46e-50;1!DOID:5861;1.46e-50;1!DOID:6496;1.46e-50;1!DOID:201;1.22e-09;6!DOID:0060100;1.22e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.46e-50,1;DOID:4549,1.46e-50,1;DOID:5861,1.46e-50,1;DOID:6496,1.46e-50,1;DOID:201,1.22e-09,6;DOID:0060100,1.22e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0001869!1.80e-25!32;UBERON:0002780!7.23e-25!41;UBERON:0001890!7.23e-25!41;UBERON:0006240!7.23e-25!41;UBERON:0003080!3.48e-24!42;UBERON:0001017!7.17e-24!82;UBERON:0001893!8.59e-24!34;UBERON:0001950!9.19e-24!20;UBERON:0000073!2.39e-23!94;UBERON:0001016!2.39e-23!94;UBERON:0005743!1.73e-22!86;UBERON:0002791!1.69e-21!33;UBERON:0002619!1.84e-21!22;UBERON:0002020!8.81e-21!34;UBERON:0003528!8.81e-21!34;UBERON:0002616!2.81e-20!59;UBERON:0001049!8.06e-19!57;UBERON:0005068!8.06e-19!57;UBERON:0006241!8.06e-19!57;UBERON:0007135!8.06e-19!57;UBERON:0000956!1.13e-18!25;UBERON:0000203!1.13e-18!25;UBERON:0000955!3.55e-18!69;UBERON:0006238!3.55e-18!69;UBERON:0003056!2.04e-15!61;UBERON:0001872!7.13e-13!5;UBERON:0003075!2.01e-12!86;UBERON:0007284!2.01e-12!86;UBERON:0002346!1.14e-11!90;UBERON:0004121!2.79e-11!169;UBERON:0000924!7.17e-11!173;UBERON:0006601!7.17e-11!173;UBERON:0000200!3.64e-10!6;UBERON:0000033!3.65e-09!123;UBERON:0007023!3.83e-09!115;UBERON:0000369!1.24e-08!4;UBERON:0002435!1.24e-08!4;UBERON:0000204!1.24e-08!4;UBERON:0010082!1.24e-08!4;UBERON:0000153!1.62e-08!129;UBERON:0007811!1.62e-08!129;UBERON:0001871!8.46e-08!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;7.14e-26;2!UBERON:0002757;7.14e-26;2!UBERON:0010134;7.14e-26;2!UBERON:0005408;7.14e-26;2!UBERON:0001899;7.14e-26;2!UBERON:0002418;6.76e-18;3!UBERON:0004755;6.76e-18;3!UBERON:0003296;1.13e-13;4!UBERON:0010133;1.13e-13;4!UBERON:0002784;1.13e-13;4!UBERON:0001872;3.26e-11;5!UBERON:0001950;1.77e-10;20!UBERON:0002619;1.17e-09;22!UBERON:0002780;1.41e-09;41!UBERON:0001890;1.41e-09;41!UBERON:0000956;1.15e-08;25!UBERON:0000203;1.15e-08;25!UBERON:0001871;2.18e-08;6!UBERON:0001894;2.18e-08;7!UBERON:0001893;3.69e-07;34!UBERON:0000073;5.36e-07;53!UBERON:0002616;5.36e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,9.18e-26,2;UBERON:0002757,9.18e-26,2;UBERON:0010134,9.18e-26,2;UBERON:0005408,9.18e-26,2;UBERON:0001899,9.18e-26,2;UBERON:0002418,6.76e-18,3;UBERON:0004755,6.76e-18,3;UBERON:0003296,1.29e-13,4;UBERON:0010133,1.29e-13,4;UBERON:0002784,1.29e-13,4;UBERON:0002780,1.73e-11,41;UBERON:0001890,1.73e-11,41;UBERON:0003080,1.73e-11,41;UBERON:0006240,1.73e-11,41;UBERON:0001872,2.94e-11,5;UBERON:0001950,1.69e-10,20;UBERON:0002619,1.12e-09,22;UBERON:0000073,3.93e-09,53;UBERON:0002616,3.93e-09,53;UBERON:0001049,1.07e-08,56;UBERON:0005068,1.07e-08,56;UBERON:0006241,1.07e-08,56;UBERON:0007135,1.07e-08,56;UBERON:0000956,1.11e-08,25;UBERON:0000203,1.11e-08,25;UBERON:0001871,2.18e-08,6;UBERON:0001894,2.35e-08,7;UBERON:0006222,2.35e-08,7;UBERON:0003056,4.61e-08,61;UBERON:0000955,3.10e-07,68;UBERON:0006238,3.10e-07,68;UBERON:0002791,4.74e-07,32;UBERON:0001869,4.74e-07,32 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0.167186495390678,0,0,0,0.222820913770347,0.294605907474837,0.443067789167242,0.270803863765016,0,0.260118695119756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0.18611685633159,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0.347249989866585,0,0.120596438625408,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,1.22429104652196,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51595809741485,0,0,0,0,6.61920950186252,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0.415440338029185,0,0,0.303747783290123,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243585196761792,0,0,0,0,0,0,0,0.244052529803926,0.1251909307065,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0,0,0.504143392443436,0.207471757392654,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0.413373593002368,0.19024743058172,1.64092442705466,0,0,0,0,0,1.00885116665647,0,0.227662191351298,0,0,0,0,0.263091094251396,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0.994753875806841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203974470572744,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p33@HDAC9 | |||
}} |
Revision as of 15:51, 22 January 2014
Short description: | p33@HDAC9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_33_at_HDAC9_5end |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | 0bp_to_ENST00000441986_5end |
EntrezGene: | HDAC9 |
HGNC: | 14065 |
UniProt: | C9JD56 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 1.22e-09 | 6 |
chondrocyte | 1.22e-09 | 6 |
GAG secreting cell | 7.48e-07 | 9 |
carbohydrate secreting cell | 7.48e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
pineal body | 9.18e-26 | 2 |
regional part of epithalamus | 9.18e-26 | 2 |
secretory circumventricular organ | 9.18e-26 | 2 |
circumventricular organ | 9.18e-26 | 2 |
epithalamus | 9.18e-26 | 2 |
cartilage tissue | 6.76e-18 | 3 |
skeletal tissue | 6.76e-18 | 3 |
gland of diencephalon | 1.29e-13 | 4 |
neuroendocrine gland | 1.29e-13 | 4 |
regional part of diencephalon | 1.29e-13 | 4 |
regional part of forebrain | 1.73e-11 | 41 |
forebrain | 1.73e-11 | 41 |
anterior neural tube | 1.73e-11 | 41 |
future forebrain | 1.73e-11 | 41 |
parietal lobe | 2.94e-11 | 5 |
neocortex | 1.69e-10 | 20 |
regional part of cerebral cortex | 1.12e-09 | 22 |
regional part of nervous system | 3.93e-09 | 53 |
regional part of brain | 3.93e-09 | 53 |
neural tube | 1.07e-08 | 56 |
neural rod | 1.07e-08 | 56 |
future spinal cord | 1.07e-08 | 56 |
neural keel | 1.07e-08 | 56 |
cerebral cortex | 1.11e-08 | 25 |
pallium | 1.11e-08 | 25 |
temporal lobe | 2.18e-08 | 6 |
diencephalon | 2.35e-08 | 7 |
future diencephalon | 2.35e-08 | 7 |
pre-chordal neural plate | 4.61e-08 | 61 |
brain | 3.10e-07 | 68 |
future brain | 3.10e-07 | 68 |
regional part of telencephalon | 4.74e-07 | 32 |
cerebral hemisphere | 4.74e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.46e-50 | 1 |
extraosseous chondrosarcoma | 1.46e-50 | 1 |
myxoid chondrosarcoma | 1.46e-50 | 1 |
extraskeletal myxoid chondrosarcoma | 1.46e-50 | 1 |
connective tissue cancer | 1.22e-09 | 6 |
musculoskeletal system cancer | 1.22e-09 | 6 |