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FFCP PHASE1:Mm9::chr3:136333533..136333547,+: Difference between revisions

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{{FFCP|EntrezGene=19055|HGNC=|MCL_coexpression_id=235|UniProt=P63328,B2RRX2|association_with_transcript=-186bp_to_ENSMUST00000056758,NM_008913,uc008rmg.1,uc008rmh.1_5end|description=CAGE_peak_8_at_Ppp3ca_5end|id=chr3:136333533..136333547,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!1.16e-09!34;UBERON:0000033!1.72e-09!63;UBERON:0001017!4.82e-09!73;UBERON:0005743!4.82e-09!73;UBERON:0004121!2.05e-08!102;UBERON:0000924!2.05e-08!102;UBERON:0006601!2.05e-08!102;UBERON:0000073!2.08e-08!75;UBERON:0001016!2.08e-08!75;UBERON:0001049!2.49e-08!52;UBERON:0005068!2.49e-08!52;UBERON:0006241!2.49e-08!52;UBERON:0007135!2.49e-08!52;UBERON:0002021!6.05e-08!10;UBERON:0000411!6.05e-08!10;UBERON:0001950!6.05e-08!10;UBERON:0000955!6.16e-08!50;UBERON:0006238!6.16e-08!50;UBERON:0002346!6.32e-08!71;UBERON:0003075!6.32e-08!71;UBERON:0007284!6.32e-08!71;UBERON:0002791!1.08e-07!29;UBERON:0003528!1.08e-07!29;UBERON:0001893!1.08e-07!29;UBERON:0002616!1.68e-07!49;UBERON:0000956!2.42e-07!21;UBERON:0001869!2.42e-07!21;UBERON:0000203!2.42e-07!21;UBERON:0003056!2.61e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.21e-16,54;UBERON:0002020,1.80e-16,34;UBERON:0002346,4.90e-16,64;UBERON:0003075,4.90e-16,64;UBERON:0007284,4.90e-16,64;UBERON:0004121,7.06e-16,95;UBERON:0000924,7.06e-16,95;UBERON:0006601,7.06e-16,95;UBERON:0010371,8.74e-16,73;UBERON:0001017,1.96e-15,73;UBERON:0001016,1.00e-14,75;UBERON:0001049,1.03e-14,52;UBERON:0005068,1.03e-14,52;UBERON:0006241,1.03e-14,52;UBERON:0007135,1.03e-14,52;UBERON:0002021,1.98e-14,10;UBERON:0000411,1.98e-14,10;UBERON:0001950,1.98e-14,10;UBERON:0003528,1.41e-13,29;UBERON:0002791,1.41e-13,29;UBERON:0001893,1.41e-13,29;UBERON:0003056,6.53e-13,49;UBERON:0000955,3.96e-12,47;UBERON:0006238,3.96e-12,47;UBERON:0002616,2.65e-11,46;UBERON:0000956,3.47e-11,21;UBERON:0001869,3.47e-11,21;UBERON:0000203,3.47e-11,21;UBERON:0002780,6.67e-11,39;UBERON:0001890,6.67e-11,39;UBERON:0006240,6.67e-11,39;UBERON:0002619,8.92e-11,17;UBERON:0003080,1.81e-10,40;UBERON:0010314,1.79e-09,92|phase1_expression=1.28119077683835,0,0,0.90739263392049,0.500895729946347,1.00727563147134,0.467225281191051,0.129123323441576,0.703943610758334,0.468129052643987,0,0.159544317990673,0,0,0,0.607425802169478,0,0.788655413395594,0.411343300817216,1.27316895539409,3.31668831589172,0.595745707205312,0.261199789138935,0,0.45881856213434,0,0.430761996159075,0,0,0.252030129759931,0,0.635030673459631,0,0,0.866554859253824,0,0.408338712524738,4.60384793810598,1.5626706890476,3.14114246384279,4.1176204162171,4.78131839470912,3.88408282424923,0.251793635951155,0.304130793658544,0.183546752161682,0,0,0.219686182734472,0,0,0,1.8456086666351,0,0,0.771778308107841,0,0,0.404632921719196,1.05798195854407,1.26766280701236,0.338844532069132,0,0,0,0,0,1.15265491596466,1.45165457231869,0.945041568321835,0.841299845405528,1.14260393761521,2.20868540951614,0.734944795289724,0.479227355091182,0,2.20231761998777,3.70293280447044,2.91852413186863,0.395658863190582,0,0,1.95428099300967,1.12552522006336,1.68078072554491,2.65165726926301,2.13557521198654,0.745597783301202,0.227178579999552,0.0755715601067855,0.579728977403356,0,0,0,0.649776417447669,0.448026887097336,1.12355536105401,1.02258193546835,0.259786004602869,0,0.281686839553361,1.28326477414318,2.54805239706646,0,0,0.253359865475099,1.01104889002957,0.68510327831436,0.258937883647172,0.29688427812965,0.173485326766136,1.21786191324856,0,0.150722640552623,0.470354828542819,0.251333182659351,0.741584903203122,0.433798070759735,0,0.323533699894818,0.883366073841574,0.484875253135222,0,1.17112318804619,2.30391377494801,0.510914110417183,1.07833612055328,0,0.889491589511453,0.748953197024114,14.1825186873774,1.7591609295801,7.30062144807561,11.7629110371952,1.24672826735736,8.76102820565891,0.203678727700633,0.746441823660558,0.252722758433675,1.47309299120532,0,0.459804208866946,0.360124259610698,1.05493372485001,1.08858398642125,1.2811372028485,1.3118241438362,1.03481348295606,0.862271971731369,0.567318240503458,0,0.219195732427575,0,0,0.61734640922383,0.59710280045548,0,0.257347907114715,1.42081749697796,0.207125772535502,0.469052119962192,0.36012412292203,0.23674473558521,0.393528463494808,0.308534225774757,0.232533944750408,0.268273401399619,0.233530684734339,0.329119699826961,0.164167464079095,0.405344047729279,0.292399974850665,0.439100230582101,0.805238512562231,26.49653351908,2.16099685996497,0.330418782983798,0.264450566663544,0.426576501070468,0.232236671860439,0.38660238396628,0,0,0.190225626112559,0.474529061544512,0,0.251335208800269,0.596869416123452,0.38992817423824,0,0,0.199141273254367,0,0.571242563048644,0,0.610953983535943,0.387904974335251,0.49095073923223,0.822074982615345,0.442830443938806,0.156998727841375,0.370191491765402,0,0.166845105716094,0,0,0.405720242777006,0.241177159752417,0,0.575392274901621,0.162135226775035,0,1.43768206527355,1.11642284300551,0.3120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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:19055
|HGNC=
|MCL_coexpression_id=235
|TSSclassifier=NA
|UniProt=uniprot:P63328,uniprot:B2RRX2
|association_with_transcript=-186bp_to_ENSMUST00000056758,NM_008913,uc008rmg.1,uc008rmh.1_5end
|cluster_id=chr3:136333533..136333547,+
|description=CAGE_peak_8_at_Ppp3ca_5end
|id=chr3:136333533..136333547,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002020!1.16e-09!34;UBERON:0000033!1.72e-09!63;UBERON:0001017!4.82e-09!73;UBERON:0005743!4.82e-09!73;UBERON:0004121!2.05e-08!102;UBERON:0000924!2.05e-08!102;UBERON:0006601!2.05e-08!102;UBERON:0000073!2.08e-08!75;UBERON:0001016!2.08e-08!75;UBERON:0001049!2.49e-08!52;UBERON:0005068!2.49e-08!52;UBERON:0006241!2.49e-08!52;UBERON:0007135!2.49e-08!52;UBERON:0002021!6.05e-08!10;UBERON:0000411!6.05e-08!10;UBERON:0001950!6.05e-08!10;UBERON:0000955!6.16e-08!50;UBERON:0006238!6.16e-08!50;UBERON:0002346!6.32e-08!71;UBERON:0003075!6.32e-08!71;UBERON:0007284!6.32e-08!71;UBERON:0002791!1.08e-07!29;UBERON:0003528!1.08e-07!29;UBERON:0001893!1.08e-07!29;UBERON:0002616!1.68e-07!49;UBERON:0000956!2.42e-07!21;UBERON:0001869!2.42e-07!21;UBERON:0000203!2.42e-07!21;UBERON:0003056!2.61e-07!49
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.21e-16,54;UBERON:0002020,1.80e-16,34;UBERON:0002346,4.90e-16,64;UBERON:0003075,4.90e-16,64;UBERON:0007284,4.90e-16,64;UBERON:0004121,7.06e-16,95;UBERON:0000924,7.06e-16,95;UBERON:0006601,7.06e-16,95;UBERON:0010371,8.74e-16,73;UBERON:0001017,1.96e-15,73;UBERON:0001016,1.00e-14,75;UBERON:0001049,1.03e-14,52;UBERON:0005068,1.03e-14,52;UBERON:0006241,1.03e-14,52;UBERON:0007135,1.03e-14,52;UBERON:0002021,1.98e-14,10;UBERON:0000411,1.98e-14,10;UBERON:0001950,1.98e-14,10;UBERON:0003528,1.41e-13,29;UBERON:0002791,1.41e-13,29;UBERON:0001893,1.41e-13,29;UBERON:0003056,6.53e-13,49;UBERON:0000955,3.96e-12,47;UBERON:0006238,3.96e-12,47;UBERON:0002616,2.65e-11,46;UBERON:0000956,3.47e-11,21;UBERON:0001869,3.47e-11,21;UBERON:0000203,3.47e-11,21;UBERON:0002780,6.67e-11,39;UBERON:0001890,6.67e-11,39;UBERON:0006240,6.67e-11,39;UBERON:0002619,8.92e-11,17;UBERON:0003080,1.81e-10,40;UBERON:0010314,1.79e-09,92
|phase1_expression=1.28119077683835,0,0,0.90739263392049,0.500895729946347,1.00727563147134,0.467225281191051,0.129123323441576,0.703943610758334,0.468129052643987,0,0.159544317990673,0,0,0,0.607425802169478,0,0.788655413395594,0.411343300817216,1.27316895539409,3.31668831589172,0.595745707205312,0.261199789138935,0,0.45881856213434,0,0.430761996159075,0,0,0.252030129759931,0,0.635030673459631,0,0,0.866554859253824,0,0.408338712524738,4.60384793810598,1.5626706890476,3.14114246384279,4.1176204162171,4.78131839470912,3.88408282424923,0.251793635951155,0.304130793658544,0.183546752161682,0,0,0.219686182734472,0,0,0,1.8456086666351,0,0,0.771778308107841,0,0,0.404632921719196,1.05798195854407,1.26766280701236,0.338844532069132,0,0,0,0,0,1.15265491596466,1.45165457231869,0.945041568321835,0.841299845405528,1.14260393761521,2.20868540951614,0.734944795289724,0.479227355091182,0,2.20231761998777,3.70293280447044,2.91852413186863,0.395658863190582,0,0,1.95428099300967,1.12552522006336,1.68078072554491,2.65165726926301,2.13557521198654,0.745597783301202,0.227178579999552,0.0755715601067855,0.579728977403356,0,0,0,0.649776417447669,0.448026887097336,1.12355536105401,1.02258193546835,0.259786004602869,0,0.281686839553361,1.28326477414318,2.54805239706646,0,0,0.253359865475099,1.01104889002957,0.68510327831436,0.258937883647172,0.29688427812965,0.173485326766136,1.21786191324856,0,0.150722640552623,0.470354828542819,0.251333182659351,0.741584903203122,0.433798070759735,0,0.323533699894818,0.883366073841574,0.484875253135222,0,1.17112318804619,2.30391377494801,0.510914110417183,1.07833612055328,0,0.889491589511453,0.748953197024114,14.1825186873774,1.7591609295801,7.30062144807561,11.7629110371952,1.24672826735736,8.76102820565891,0.203678727700633,0.746441823660558,0.252722758433675,1.47309299120532,0,0.459804208866946,0.360124259610698,1.05493372485001,1.08858398642125,1.2811372028485,1.3118241438362,1.03481348295606,0.862271971731369,0.567318240503458,0,0.219195732427575,0,0,0.61734640922383,0.59710280045548,0,0.257347907114715,1.42081749697796,0.207125772535502,0.469052119962192,0.36012412292203,0.23674473558521,0.393528463494808,0.308534225774757,0.232533944750408,0.268273401399619,0.233530684734339,0.329119699826961,0.164167464079095,0.405344047729279,0.292399974850665,0.439100230582101,0.805238512562231,26.49653351908,2.16099685996497,0.330418782983798,0.264450566663544,0.426576501070468,0.232236671860439,0.38660238396628,0,0,0.190225626112559,0.474529061544512,0,0.251335208800269,0.596869416123452,0.38992817423824,0,0,0.199141273254367,0,0.571242563048644,0,0.610953983535943,0.387904974335251,0.49095073923223,0.822074982615345,0.442830443938806,0.156998727841375,0.370191491765402,0,0.166845105716094,0,0,0.405720242777006,0.241177159752417,0,0.575392274901621,0.162135226775035,0,1.43768206527355,1.11642284300551,0.312037673114561,0,0.179397413521912,0.482443521363367,0.923765950833023,0,0.651859905768103,0.169745085775188,0.704070744865506,0.837531287209079,0.476087281772027,0.780534591431195,1.26108115284953,1.32878813789265,0.159454768657487,0.655453258862952,1.55416483679306,0.723245292907558,1.50791283939272,0,0,1.10374698521893,0.642202359951168,1.28932855251423,0.163934945376675,2.27223834483936,0.631016438832513,0.780877488593277,0,0.238968797952552,0.222798674082394,0.566153061577665,0.809621403349789,0.292255857911312,0.790575555893047,2.57057053137446,0.141940085208269,0.178065603667255,0.325773918707152,0.824850614862677,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0.614870295887855,0.258428293168221,0.727067458955011,0.712994756769443,0,0,0,0.340439605753788,0.720244376125241,0.129358683782755,0,0.532020700926821,0.356737635204141,0.164549020602121,0,0.469343416127421,0.21183207086382,0.441056796109924,1.97863503529776,0.968786560175433,0.180938774784468,0.238744688006273,0,0.291480836629851,1.48340241608408,0.683483523191411,0.206386867963223,0.555583582109135,0.565105371014073,0.820165366326151,0.915112692826091,0.509935289981566,0.839708713941948,0.829199842826543,0.954670618015114,0,0.203319467126849,0.540026704109006,0,0.436725127492355,0.404593039154462,0.330613822901344,0.523511883968059,0.259229946583586,0.621339313086926,0,0.299033092087958,0.165458490457098,0,0.516639293910924,0.844780627453891,0.469428954583016,0.13020438484395,0.209718688851422,0.483168241652012,0,0,0.405450430580328,0.205421914329655,0.129920822977795,0.358053391334963,0.39736270956253,0.360586348559907,0.147689527174577,0.403865799792591,0,0,0.0974578807397524,0.0962118416403295,0,0.680191150845634,0,0.0897138566094757,0,0.579568782096571,0.375364950902364,0.549454872801795,0.214368379079066,0.501572104035363,6.21227026878773,4.14292712856459,6.30185064783336,6.18671456437275,6.85082519770642,6.0431511791176,9.45031500324528,4.95353323546643,4.98456649882625,9.83744592328458,0.31136204275253,0,0.682934423016537,0.486213434136588,0.209613162627982,0,0.44449345560323,0.206035057238894,0.64183841918363,1.26348605881899,0,0.943131706930381,0.842773567228942,0.512201219238954,0.689225627467359,0,0.463537303779422,0.38581844092741,0.412085900803307,0.735994600671987,1.37147700954166,1.06485483695602,1.66905332963125,0.436039249896986,0.658765662907314,0.423073039458382,1.28049581010941,0.263069711437843,0.814824683075171,0.561142271657738,0.118635018124174,0.689531376628944,0,0.309873682371932,0.385813221962283,0.249810577937946,0.701794825336225,0.859484216193193,0.382576664137687,0.441182838239031,1.15933917810211
|short_description=p8@Ppp3ca
}}

Revision as of 02:27, 6 August 2015

Short description:p8@Ppp3ca
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_8_at_Ppp3ca_5end
Coexpression cluster:MCL_coexpression_mm9:235
Association with transcript: -186bp_to_ENSMUST00000056758, NM_008913, uc008rmg.1, uc008rmh.1_5end
EntrezGene:19055
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p8@Ppp3ca

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.70
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.79
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.32
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G84.60
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H33.14
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G94.12
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H24.78
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H43.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.85
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.45
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.95
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.21
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.73
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.70
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.68
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.65
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I22.30
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.08
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.89
corpora quadrigemina, adult.CNhs10501.16-22A40.75
corpus striatum, adult.CNhs10487.19-21D814.18
corpus striatum, neonate N00.CNhs11226.630-43F11.76
cortex, adult.CNhs10473.12-14D57.30
cortex, neonate N30.CNhs11107.1392-42F211.76
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B28.76
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.75
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C61.09
eyeball, neonate N01.CNhs11140.1532-43E71.28
eyeball, neonate N02.CNhs11205.1551-44G81.31
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.42
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.41
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.81
hippocampus, adult.CNhs10478.13-16E826.50
hippocampus, neonate N00.CNhs11228.627-43G12.16
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.49
kidney, neonate N10.CNhs11206.758-6D50.82
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.92
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E51.26
lung, neonate N07.CNhs11111.715-19A31.33
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C71.55
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A31.29
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.27
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I92.57
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.82
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C31.98
skin, neonate N00.CNhs11124.650-25G40.97
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C91.48
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.82
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.83
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.21
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.14
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.30
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.19
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.85
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.04
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A69.45
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.95
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.98
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A99.84
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.21e-1654
gray matter1.80e-1634
neurectoderm4.90e-1664
neural plate4.90e-1664
presumptive neural plate4.90e-1664
ectoderm-derived structure7.06e-1695
ectoderm7.06e-1695
presumptive ectoderm7.06e-1695
ecto-epithelium8.74e-1673
central nervous system1.96e-1573
nervous system1.00e-1475
neural tube1.03e-1452
neural rod1.03e-1452
future spinal cord1.03e-1452
neural keel1.03e-1452
occipital lobe1.98e-1410
visual cortex1.98e-1410
neocortex1.98e-1410
brain grey matter1.41e-1329
regional part of telencephalon1.41e-1329
telencephalon1.41e-1329
pre-chordal neural plate6.53e-1349
brain3.96e-1247
future brain3.96e-1247
regional part of brain2.65e-1146
cerebral cortex3.47e-1121
cerebral hemisphere3.47e-1121
pallium3.47e-1121
regional part of forebrain6.67e-1139
forebrain6.67e-1139
future forebrain6.67e-1139
regional part of cerebral cortex8.92e-1117
anterior neural tube1.81e-1040
structure with developmental contribution from neural crest1.79e-0992
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