FFCP PHASE1:Mm9::chr4:116793197..116793211,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:116793197..116793211,+|id=chr4:116793197..116793211,+|ontology_enrichment_celltype=CL:0000838!2.12e-17!12;CL:0000791!2.59e-17!9;CL:0000789!2.59e-17!9;CL:0002420!2.59e-17!9;CL:0002419!2.59e-17!9;CL:0000790!2.59e-17!9;CL:0000542!5.22e-16!13;CL:0000051!5.22e-16!13;CL:0000738!8.40e-16!17;CL:0002087!8.40e-16!17;CL:0000084!4.32e-14!11;CL:0000827!4.32e-14!11;CL:0000624!1.04e-13!8;CL:0002031!4.27e-13!25;CL:0000893!7.61e-12!6;CL:0002489!7.61e-12!6;CL:0000898!7.61e-12!6;CL:0000809!7.61e-12!6;CL:0000810!7.61e-12!6;CL:0000895!7.61e-12!6;CL:0000808!7.61e-12!6;CL:0000894!7.61e-12!6;CL:0000806!7.61e-12!6;CL:0000807!7.61e-12!6;CL:0000805!7.61e-12!6;CL:0002425!7.61e-12!6;CL:0002436!7.61e-12!6;CL:0002427!7.61e-12!6;CL:0002428!7.61e-12!6;CL:0002429!7.61e-12!6;CL:0002433!7.61e-12!6;CL:0002431!7.61e-12!6;CL:0002432!7.61e-12!6;CL:0000988!5.89e-10!32;CL:0002032!5.89e-10!32;CL:0000037!5.89e-10!32;CL:0000566!5.89e-10!32;CL:0000837!5.89e-10!32;CL:0002320!4.02e-08!46;CL:0000134!4.02e-08!46|ontology_enrichment_celltype_v019_2=CL:0000355,1.20e-08,9|ontology_enrichment_disease=DOID:0060100!3.01e-07!3;DOID:4045!3.01e-07!3|ontology_enrichment_disease_v019_2=DOID:0060100,8.72e-24,3;DOID:4045,8.72e-24,3;DOID:0050686,1.84e-12,6|ontology_enrichment_uberon=UBERON:0002384!4.02e-08!46|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.20e-08,9;UBERON:0002036,1.20e-08,9;UBERON:0002385,1.20e-08,9;UBERON:0000486,1.20e-08,9;UBERON:0007503,1.20e-08,9;UBERON:0001015,1.20e-08,9;UBERON:0002329,1.20e-08,9;UBERON:0003082,1.20e-08,9;UBERON:0003059,1.20e-08,9;UBERON:0007282,1.20e-08,9;UBERON:0004290,1.20e-08,9;UBERON:0009618,1.20e-08,9;UBERON:0000383,7.02e-08,10;UBERON:0007524,3.00e-07,11;UBERON:0003077,3.00e-07,11;UBERON:0007285,3.00e-07,11|phase1_expression=0,0,0,0.30246421130683,0,0,0,0,0.140788722151667,0,0.34243593645101,0,0.342401459862411,0.0874204024189974,0,0,0,0,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.34825304589526,3.906676722619,0,25.8821854733646,6.83045484958446,5.34061388334269,0,0,0,0,0,0,0,0,0,0.335565212115473,0.725362142011344,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.259786004602869,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0|short_description=p@chr4:116793197..116793211,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr4:116793197..116793211,+ | |||
|description=CAGE_peak_at_chr4:116793197..116793211,+ | |||
|id=chr4:116793197..116793211,+ | |||
|ontology_enrichment_celltype=CL:0000838!2.12e-17!12;CL:0000791!2.59e-17!9;CL:0000789!2.59e-17!9;CL:0002420!2.59e-17!9;CL:0002419!2.59e-17!9;CL:0000790!2.59e-17!9;CL:0000542!5.22e-16!13;CL:0000051!5.22e-16!13;CL:0000738!8.40e-16!17;CL:0002087!8.40e-16!17;CL:0000084!4.32e-14!11;CL:0000827!4.32e-14!11;CL:0000624!1.04e-13!8;CL:0002031!4.27e-13!25;CL:0000893!7.61e-12!6;CL:0002489!7.61e-12!6;CL:0000898!7.61e-12!6;CL:0000809!7.61e-12!6;CL:0000810!7.61e-12!6;CL:0000895!7.61e-12!6;CL:0000808!7.61e-12!6;CL:0000894!7.61e-12!6;CL:0000806!7.61e-12!6;CL:0000807!7.61e-12!6;CL:0000805!7.61e-12!6;CL:0002425!7.61e-12!6;CL:0002436!7.61e-12!6;CL:0002427!7.61e-12!6;CL:0002428!7.61e-12!6;CL:0002429!7.61e-12!6;CL:0002433!7.61e-12!6;CL:0002431!7.61e-12!6;CL:0002432!7.61e-12!6;CL:0000988!5.89e-10!32;CL:0002032!5.89e-10!32;CL:0000037!5.89e-10!32;CL:0000566!5.89e-10!32;CL:0000837!5.89e-10!32;CL:0002320!4.02e-08!46;CL:0000134!4.02e-08!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0000355,1.20e-08,9 | |||
|ontology_enrichment_disease=DOID:0060100!3.01e-07!3;DOID:4045!3.01e-07!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,8.72e-24,3;DOID:4045,8.72e-24,3;DOID:0050686,1.84e-12,6 | |||
|ontology_enrichment_uberon=UBERON:0002384!4.02e-08!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.20e-08,9;UBERON:0002036,1.20e-08,9;UBERON:0002385,1.20e-08,9;UBERON:0000486,1.20e-08,9;UBERON:0007503,1.20e-08,9;UBERON:0001015,1.20e-08,9;UBERON:0002329,1.20e-08,9;UBERON:0003082,1.20e-08,9;UBERON:0003059,1.20e-08,9;UBERON:0007282,1.20e-08,9;UBERON:0004290,1.20e-08,9;UBERON:0009618,1.20e-08,9;UBERON:0000383,7.02e-08,10;UBERON:0007524,3.00e-07,11;UBERON:0003077,3.00e-07,11;UBERON:0007285,3.00e-07,11 | |||
|phase1_expression=0,0,0,0.30246421130683,0,0,0,0,0.140788722151667,0,0.34243593645101,0,0.342401459862411,0.0874204024189974,0,0,0,0,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.34825304589526,3.906676722619,0,25.8821854733646,6.83045484958446,5.34061388334269,0,0,0,0,0,0,0,0,0,0.335565212115473,0.725362142011344,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.259786004602869,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0 | |||
|short_description=p@chr4:116793197..116793211,+ | |||
}} |
Latest revision as of 15:00, 4 August 2015
Short description: | p@chr4:116793197..116793211, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:116793197..116793211, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 1.20e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 1.20e-08 | 9 |
striated muscle tissue | 1.20e-08 | 9 |
muscle tissue | 1.20e-08 | 9 |
multilaminar epithelium | 1.20e-08 | 9 |
epithelial vesicle | 1.20e-08 | 9 |
musculature | 1.20e-08 | 9 |
somite | 1.20e-08 | 9 |
myotome | 1.20e-08 | 9 |
presomitic mesoderm | 1.20e-08 | 9 |
presumptive segmental plate | 1.20e-08 | 9 |
dermomyotome | 1.20e-08 | 9 |
trunk paraxial mesoderm | 1.20e-08 | 9 |
musculature of body | 7.02e-08 | 10 |
dense mesenchyme tissue | 3.00e-07 | 11 |
paraxial mesoderm | 3.00e-07 | 11 |
presumptive paraxial mesoderm | 3.00e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 8.72e-24 | 3 |
muscle cancer | 8.72e-24 | 3 |
organ system cancer | 1.84e-12 | 6 |