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FFCP PHASE1:Mm9::chr4:130488532..130488559,+: Difference between revisions

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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=521|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:130488532..130488559,+|id=chr4:130488532..130488559,+|ontology_enrichment_celltype=CL:0000988!4.19e-10!32;CL:0002032!4.19e-10!32;CL:0000037!4.19e-10!32;CL:0000566!4.19e-10!32;CL:0000837!4.19e-10!32;CL:0002031!9.01e-09!25;CL:0000838!1.63e-08!12;CL:0000084!9.98e-08!11;CL:0000827!9.98e-08!11;CL:0000542!1.76e-07!13;CL:0000051!1.76e-07!13;CL:0000738!4.53e-07!17;CL:0002087!4.53e-07!17|ontology_enrichment_celltype_v019_2=CL:0000988,2.17e-08,32;CL:0002032,2.17e-08,32;CL:0000037,2.17e-08,32;CL:0000837,2.17e-08,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!1.71e-17!48;UBERON:0002390!6.55e-16!45;UBERON:0003061!6.55e-16!45;UBERON:0004177!7.78e-15!29;UBERON:0002405!7.00e-14!70;UBERON:0002370!1.47e-11!23;UBERON:0000974!1.47e-11!23;UBERON:0004807!1.47e-11!23;UBERON:0005058!1.47e-11!23;UBERON:0003351!1.47e-11!23;UBERON:0009113!1.47e-11!23;UBERON:0003295!1.47e-11!23;UBERON:0009722!1.47e-11!23;UBERON:0005562!1.47e-11!23;UBERON:0007690!1.47e-11!23;UBERON:0003081!3.18e-11!88;UBERON:0006562!1.07e-10!24;UBERON:0003408!1.07e-10!24;UBERON:0001557!1.07e-10!24;UBERON:0001042!1.07e-10!24;UBERON:0008814!1.07e-10!24;UBERON:0009145!1.07e-10!24;UBERON:0005057!3.17e-10!51;UBERON:0000065!7.46e-10!41;UBERON:0001004!2.43e-09!42;UBERON:0000072!1.53e-08!27;UBERON:0001041!5.65e-07!92|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.88e-23,48;UBERON:0002405,3.88e-23,48;UBERON:0002390,1.77e-22,45;UBERON:0003061,1.77e-22,45;UBERON:0004177,2.27e-22,29;UBERON:0005057,2.27e-22,29;UBERON:0002370,7.24e-20,23;UBERON:0000974,7.24e-20,23;UBERON:0004807,7.24e-20,23;UBERON:0005058,7.24e-20,23;UBERON:0003351,7.24e-20,23;UBERON:0009113,7.24e-20,23;UBERON:0003295,7.24e-20,23;UBERON:0009722,7.24e-20,23;UBERON:0005562,7.24e-20,23;UBERON:0007690,7.24e-20,23;UBERON:0006562,6.71e-19,24;UBERON:0003408,6.71e-19,24;UBERON:0001557,6.71e-19,24;UBERON:0001042,6.71e-19,24;UBERON:0008814,6.71e-19,24;UBERON:0009145,6.71e-19,24;UBERON:0000077,7.84e-18,35;UBERON:0000072,1.98e-16,27;UBERON:0000065,6.90e-13,41;UBERON:0003081,1.53e-12,87;UBERON:0001004,1.72e-12,42;UBERON:0007811,1.69e-11,36;UBERON:0000153,1.89e-10,43;UBERON:0000926,1.52e-07,120;UBERON:0004120,1.52e-07,120;UBERON:0006603,1.52e-07,120;UBERON:0001041,2.31e-07,80|phase1_expression=0,0,0,0,0,0,0,2.96983643915625,0.84473233291,0.70219357896598,0.513653904676515,0.717949430958028,2.9104124088305,3.14713448708391,0.666219523631325,0.809901069559304,0.699561878128147,2.99689057090326,1.50825876966313,0.84877930359606,0.0850432901510698,0.992909512008853,0.783599367416806,0.799962113967033,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0.837063261473815,0,0.523523743973798,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,4.69791296961662,0.725362142011344,4.03312558970957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.68510327831436,7.76813650941515,0.445326417194474,0,0,0,0,0,0.125666591329675,0,0.144599356919912,0.884610551949874,0.485300549842228,3.5334642953663,1.93950101254089,0,0,0,0,2.15667224110656,0.599902730993408,1.39777249780371,0.149790639404823,0.457500602818626,0,0,0,0,0,0.407357455401265,0.870848794270651,0,0.210441855886474,0.130120442962704,0,0,0.30140963567143,0.0680364991513279,0,0.0937017245597288,0,0,0,0.351902248327898,0,0.278047249225598,1.0447564995665,0.205782136407943,0,1.40442637462647,0.772043721344145,0,0,0,0,0.23674473558521,0,0.154267112887378,0,0,0,0,0.164167464079095,0.0810688095458557,0.146199987425332,0.439100230582101,0,0.210289948564127,0,0,0,0,0,0.128867461322093,0,0,0,0.474529061544512,0,0,0.198956472041151,0.19496408711912,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0.210407459670956,0,0,0,0,0,0,0.196558995113203,0.449724224769707,0.405720242777006,0.72353147925725,0.25462585178142,0.287696137450811,0.810676133875177,0.274561413188081,0,0.372140947668503,0.312037673114561,0,0,0,2.40179147216586,0,0,0,0,0,0.476087281772027,0.585400943573396,0.630540576424764,0.44292937929755,0.956728611944923,0.81931657357869,2.07221978239075,0.867894351489069,1.50791283939272,2.17562273527484,0.491764273019036,0.551873492609465,0,0.234423373184406,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.989820737835213,0,0,0,0,0,0,0,0,0,0.316036757935816,0,1.03135543248187,0,0,0,0.214337035031592,0,0,0.164549020602121,0,0.23467170806371,0,0,0,0.161464426695906,0.180938774784468,0,0,0,0,2.05045056957423,0.412773735926445,0.555583582109135,0.753473828018764,2.46049609897845,2.0590035588587,3.0596117398894,2.09927178485487,1.79659965945751,0,0,0,0.108005340821801,0,0.218362563746178,0.134864346384821,0.330613822901344,0,0.518459893167171,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,5.68820017130721,0.202725215290164,0.718976700153791,1.81889152168913,2.32734704367726,3.57626438606277,3.60586348559907,5.46451250545936,6.5628192466296,6.02033772574499,7.4611377001262,7.40679893622118,6.83104075646339,8.76576766361767,0,0.443971906748129,0,0,0,0,0.73260649706906,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0,0,0.206035057238894,0,0,0,0.188626341386076,0.187283014939765,0.128050304809739,0.17230640686684,0,0.231768651889711,0,0,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0.188218760830661,0.169229215783353,0.182927972872773,0.263069711437843,0.135804113845862,0,0.118635018124174,0.29551344712669,0,0.154936841185966,0.192906610981141,0.499621155875892,0.701794825336225,0,0,0.661774257358546,0.231867835620421|short_description=p@chr4:130488532..130488559,+}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|HGNC=
|MCL_coexpression_id=521
|TSSclassifier=NA
|UniProt=NA
|association_with_transcript=NA
|cluster_id=chr4:130488532..130488559,+
|description=CAGE_peak_at_chr4:130488532..130488559,+
|id=chr4:130488532..130488559,+
|ontology_enrichment_celltype=CL:0000988!4.19e-10!32;CL:0002032!4.19e-10!32;CL:0000037!4.19e-10!32;CL:0000566!4.19e-10!32;CL:0000837!4.19e-10!32;CL:0002031!9.01e-09!25;CL:0000838!1.63e-08!12;CL:0000084!9.98e-08!11;CL:0000827!9.98e-08!11;CL:0000542!1.76e-07!13;CL:0000051!1.76e-07!13;CL:0000738!4.53e-07!17;CL:0002087!4.53e-07!17
|ontology_enrichment_celltype_v019_2=CL:0000988,2.17e-08,32;CL:0002032,2.17e-08,32;CL:0000037,2.17e-08,32;CL:0000837,2.17e-08,32
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002193!1.71e-17!48;UBERON:0002390!6.55e-16!45;UBERON:0003061!6.55e-16!45;UBERON:0004177!7.78e-15!29;UBERON:0002405!7.00e-14!70;UBERON:0002370!1.47e-11!23;UBERON:0000974!1.47e-11!23;UBERON:0004807!1.47e-11!23;UBERON:0005058!1.47e-11!23;UBERON:0003351!1.47e-11!23;UBERON:0009113!1.47e-11!23;UBERON:0003295!1.47e-11!23;UBERON:0009722!1.47e-11!23;UBERON:0005562!1.47e-11!23;UBERON:0007690!1.47e-11!23;UBERON:0003081!3.18e-11!88;UBERON:0006562!1.07e-10!24;UBERON:0003408!1.07e-10!24;UBERON:0001557!1.07e-10!24;UBERON:0001042!1.07e-10!24;UBERON:0008814!1.07e-10!24;UBERON:0009145!1.07e-10!24;UBERON:0005057!3.17e-10!51;UBERON:0000065!7.46e-10!41;UBERON:0001004!2.43e-09!42;UBERON:0000072!1.53e-08!27;UBERON:0001041!5.65e-07!92
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.88e-23,48;UBERON:0002405,3.88e-23,48;UBERON:0002390,1.77e-22,45;UBERON:0003061,1.77e-22,45;UBERON:0004177,2.27e-22,29;UBERON:0005057,2.27e-22,29;UBERON:0002370,7.24e-20,23;UBERON:0000974,7.24e-20,23;UBERON:0004807,7.24e-20,23;UBERON:0005058,7.24e-20,23;UBERON:0003351,7.24e-20,23;UBERON:0009113,7.24e-20,23;UBERON:0003295,7.24e-20,23;UBERON:0009722,7.24e-20,23;UBERON:0005562,7.24e-20,23;UBERON:0007690,7.24e-20,23;UBERON:0006562,6.71e-19,24;UBERON:0003408,6.71e-19,24;UBERON:0001557,6.71e-19,24;UBERON:0001042,6.71e-19,24;UBERON:0008814,6.71e-19,24;UBERON:0009145,6.71e-19,24;UBERON:0000077,7.84e-18,35;UBERON:0000072,1.98e-16,27;UBERON:0000065,6.90e-13,41;UBERON:0003081,1.53e-12,87;UBERON:0001004,1.72e-12,42;UBERON:0007811,1.69e-11,36;UBERON:0000153,1.89e-10,43;UBERON:0000926,1.52e-07,120;UBERON:0004120,1.52e-07,120;UBERON:0006603,1.52e-07,120;UBERON:0001041,2.31e-07,80
|phase1_expression=0,0,0,0,0,0,0,2.96983643915625,0.84473233291,0.70219357896598,0.513653904676515,0.717949430958028,2.9104124088305,3.14713448708391,0.666219523631325,0.809901069559304,0.699561878128147,2.99689057090326,1.50825876966313,0.84877930359606,0.0850432901510698,0.992909512008853,0.783599367416806,0.799962113967033,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0.837063261473815,0,0.523523743973798,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,4.69791296961662,0.725362142011344,4.03312558970957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.68510327831436,7.76813650941515,0.445326417194474,0,0,0,0,0,0.125666591329675,0,0.144599356919912,0.884610551949874,0.485300549842228,3.5334642953663,1.93950101254089,0,0,0,0,2.15667224110656,0.599902730993408,1.39777249780371,0.149790639404823,0.457500602818626,0,0,0,0,0,0.407357455401265,0.870848794270651,0,0.210441855886474,0.130120442962704,0,0,0.30140963567143,0.0680364991513279,0,0.0937017245597288,0,0,0,0.351902248327898,0,0.278047249225598,1.0447564995665,0.205782136407943,0,1.40442637462647,0.772043721344145,0,0,0,0,0.23674473558521,0,0.154267112887378,0,0,0,0,0.164167464079095,0.0810688095458557,0.146199987425332,0.439100230582101,0,0.210289948564127,0,0,0,0,0,0.128867461322093,0,0,0,0.474529061544512,0,0,0.198956472041151,0.19496408711912,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0.210407459670956,0,0,0,0,0,0,0.196558995113203,0.449724224769707,0.405720242777006,0.72353147925725,0.25462585178142,0.287696137450811,0.810676133875177,0.274561413188081,0,0.372140947668503,0.312037673114561,0,0,0,2.40179147216586,0,0,0,0,0,0.476087281772027,0.585400943573396,0.630540576424764,0.44292937929755,0.956728611944923,0.81931657357869,2.07221978239075,0.867894351489069,1.50791283939272,2.17562273527484,0.491764273019036,0.551873492609465,0,0.234423373184406,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.989820737835213,0,0,0,0,0,0,0,0,0,0.316036757935816,0,1.03135543248187,0,0,0,0.214337035031592,0,0,0.164549020602121,0,0.23467170806371,0,0,0,0.161464426695906,0.180938774784468,0,0,0,0,2.05045056957423,0.412773735926445,0.555583582109135,0.753473828018764,2.46049609897845,2.0590035588587,3.0596117398894,2.09927178485487,1.79659965945751,0,0,0,0.108005340821801,0,0.218362563746178,0.134864346384821,0.330613822901344,0,0.518459893167171,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,5.68820017130721,0.202725215290164,0.718976700153791,1.81889152168913,2.32734704367726,3.57626438606277,3.60586348559907,5.46451250545936,6.5628192466296,6.02033772574499,7.4611377001262,7.40679893622118,6.83104075646339,8.76576766361767,0,0.443971906748129,0,0,0,0,0.73260649706906,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0,0,0.206035057238894,0,0,0,0.188626341386076,0.187283014939765,0.128050304809739,0.17230640686684,0,0.231768651889711,0,0,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0.188218760830661,0.169229215783353,0.182927972872773,0.263069711437843,0.135804113845862,0,0.118635018124174,0.29551344712669,0,0.154936841185966,0.192906610981141,0.499621155875892,0.701794825336225,0,0,0.661774257358546,0.231867835620421
|short_description=p@chr4:130488532..130488559,+
}}

Latest revision as of 20:30, 4 August 2015

Short description:p@chr4:130488532..130488559, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr4:130488532..130488559, +
Coexpression cluster:MCL_coexpression_mm9:521
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p@chr4:130488532..130488559+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.97
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.84
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.72
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.91
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.15
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.51
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.99
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A24.70
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.03
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H97.77
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A63.53
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.16
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.40
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.87
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B12.40
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C72.07
lung, neonate N30.CNhs11133.1394-42H20.87
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.18
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G22.05
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H12.46
spleen, neonate N25.CNhs11099.1354-25G32.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.10
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.80
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B55.69
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.72
thymus, embryo E16.CNhs11002.456-26C51.82
thymus, embryo E17.CNhs10581.478-18C12.33
thymus, embryo E18.CNhs10595.1273-19G43.58
thymus, neonate N02.CNhs11181.1541-43F83.61
thymus, neonate N03.CNhs11137.2104-43C75.46
thymus, neonate N06.CNhs11197.681-26C46.56
thymus, neonate N07.CNhs11211.713-19D36.02
thymus, neonate N10.CNhs11194.748-24E47.46
thymus, neonate N20.CNhs11186.820-7A27.41
thymus, neonate N25.CNhs11125.1362-25G76.83
thymus, neonate N30.CNhs11132.1393-42G28.77
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.13
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
hemolymphoid system3.88e-2348
immune system3.88e-2348
hematopoietic system1.77e-2245
blood island1.77e-2245
hemopoietic organ2.27e-2229
immune organ2.27e-2229
thymus7.24e-2023
neck7.24e-2023
respiratory system epithelium7.24e-2023
hemolymphoid system gland7.24e-2023
pharyngeal epithelium7.24e-2023
thymic region7.24e-2023
pharyngeal gland7.24e-2023
entire pharyngeal arch endoderm7.24e-2023
thymus primordium7.24e-2023
early pharyngeal endoderm7.24e-2023
pharynx6.71e-1924
gland of gut6.71e-1924
upper respiratory tract6.71e-1924
chordate pharynx6.71e-1924
pharyngeal arch system6.71e-1924
pharyngeal region of foregut6.71e-1924
mixed endoderm/mesoderm-derived structure7.84e-1835
segment of respiratory tract1.98e-1627
respiratory tract6.90e-1341
lateral plate mesoderm1.53e-1287
respiratory system1.72e-1242
craniocervical region1.69e-1136
anterior region of body1.89e-1043
mesoderm1.52e-07120
mesoderm-derived structure1.52e-07120
presumptive mesoderm1.52e-07120
foregut2.31e-0780
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