FFCP PHASE1:Mm9::chr5:101668666..101668677,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=63|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:101668666..101668677,-|id=chr5:101668666..101668677,-|ontology_enrichment_celltype=CL:0000791!2.38e-12!9;CL:0000789!2.38e-12!9;CL:0002420!2.38e-12!9;CL:0002419!2.38e-12!9;CL:0000790!2.38e-12!9;CL:0000624!5.45e-11!8;CL:0000838!5.63e-11!12;CL:0002031!1.40e-10!25;CL:0000542!6.23e-10!13;CL:0000051!6.23e-10!13;CL:0000084!1.07e-09!11;CL:0000827!1.07e-09!11;CL:0000893!4.01e-08!6;CL:0002489!4.01e-08!6;CL:0000898!4.01e-08!6;CL:0000809!4.01e-08!6;CL:0000810!4.01e-08!6;CL:0000895!4.01e-08!6;CL:0000808!4.01e-08!6;CL:0000894!4.01e-08!6;CL:0000806!4.01e-08!6;CL:0000807!4.01e-08!6;CL:0000805!4.01e-08!6;CL:0002425!4.01e-08!6;CL:0002436!4.01e-08!6;CL:0002427!4.01e-08!6;CL:0002428!4.01e-08!6;CL:0002429!4.01e-08!6;CL:0002433!4.01e-08!6;CL:0002431!4.01e-08!6;CL:0002432!4.01e-08!6;CL:0000988!2.38e-07!32;CL:0002032!2.38e-07!32;CL:0000037!2.38e-07!32;CL:0000566!2.38e-07!32;CL:0000837!2.38e-07!32;CL:0000738!5.22e-07!17;CL:0002087!5.22e-07!17;CL:0000553!6.80e-07!6;CL:0000556!6.80e-07!6|ontology_enrichment_celltype_v019_2=CL:0002031,3.39e-18,25;CL:0000838,4.04e-17,12;CL:0000791,3.03e-16,9;CL:0000789,3.03e-16,9;CL:0002420,3.03e-16,9;CL:0002419,3.03e-16,9;CL:0000790,3.03e-16,9;CL:0000542,8.78e-16,13;CL:0000051,8.78e-16,13;CL:0000988,5.28e-14,32;CL:0002032,5.28e-14,32;CL:0000037,5.28e-14,32;CL:0000837,5.28e-14,32;CL:0000084,2.74e-13,11;CL:0000827,2.74e-13,11;CL:0000624,4.13e-12,8;CL:0000738,5.32e-12,17;CL:0002087,5.32e-12,17;CL:0000553,8.04e-10,6;CL:0000556,8.04e-10,6;CL:0002320,1.98e-09,46;CL:0000134,1.98e-09,46;CL:0000219,7.11e-08,54;CL:0000815,3.67e-07,1;CL:0000792,3.67e-07,1;CL:0000625,6.32e-07,1;CL:0000945,7.23e-07,1;CL:0000236,7.23e-07,1;CL:0000826,7.23e-07,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!1.99e-18!48;UBERON:0004177!2.45e-18!29;UBERON:0002390!8.61e-17!45;UBERON:0003061!8.61e-17!45;UBERON:0002370!3.27e-15!23;UBERON:0000974!3.27e-15!23;UBERON:0004807!3.27e-15!23;UBERON:0005058!3.27e-15!23;UBERON:0003351!3.27e-15!23;UBERON:0009113!3.27e-15!23;UBERON:0003295!3.27e-15!23;UBERON:0009722!3.27e-15!23;UBERON:0005562!3.27e-15!23;UBERON:0007690!3.27e-15!23;UBERON:0000065!1.71e-14!41;UBERON:0006562!2.31e-14!24;UBERON:0003408!2.31e-14!24;UBERON:0001557!2.31e-14!24;UBERON:0001042!2.31e-14!24;UBERON:0008814!2.31e-14!24;UBERON:0009145!2.31e-14!24;UBERON:0001004!5.59e-14!42;UBERON:0000072!3.34e-12!27;UBERON:0002405!6.14e-11!70;UBERON:0000063!1.80e-09!35;UBERON:0003081!2.16e-09!88;UBERON:0005057!1.05e-08!51;UBERON:0000077!6.62e-07!97|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.98e-09,46;UBERON:0002193,4.35e-09,48;UBERON:0002405,4.35e-09,48;UBERON:0000029,1.20e-07,1;UBERON:0001097,1.20e-07,1;UBERON:0003968,1.20e-07,1;UBERON:0001467,1.20e-07,1;UBERON:0002390,1.23e-07,45;UBERON:0003061,1.23e-07,45|phase1_expression=0.320297694209588,0,0,0,0,0,0,2.1950964985068,0.985521055061667,0.234064526321993,0.171217968225505,0.0797721589953364,4.96482116800497,1.13646523144697,0.333109761815663,0.607425802169478,0,4.57420139769445,5.75880621144103,2.97072756258621,0.0850432901510698,0,0,0.319984845586813,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17447824240415,3.62681071005672,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,2.54805239706646,0,0,0,0,0,21.2329064590681,0,0,0,0,0,0,0,0,0.289198713839823,0.884610551949874,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.923765950833023,0,0,0,0,0,0.238043640886014,0,0.157635144106191,0,0.159454768657487,0.491589944147214,1.55416483679306,0.144649058581512,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7235168460303,0,0,0,0,0,0.164549020602121,0,0,0.21183207086382,0,0.16488625294148,0,0.180938774784468,0,0,0,0,1.36696704638282,0,0,0.376736914009382,0.956859594047176,1.37266903923914,0.169978429993855,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0.102710957164827,0.389762468933385,0,0,0.240390899039938,0.147689527174577,0.201932899896295,0.15241361331,0.504130925684203,0.487289403698762,0.288635524920988,0.584384510907845,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0|short_description=p@chr5:101668666..101668677,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=63 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr5:101668666..101668677,- | |||
|description=CAGE_peak_at_chr5:101668666..101668677,- | |||
|id=chr5:101668666..101668677,- | |||
|ontology_enrichment_celltype=CL:0000791!2.38e-12!9;CL:0000789!2.38e-12!9;CL:0002420!2.38e-12!9;CL:0002419!2.38e-12!9;CL:0000790!2.38e-12!9;CL:0000624!5.45e-11!8;CL:0000838!5.63e-11!12;CL:0002031!1.40e-10!25;CL:0000542!6.23e-10!13;CL:0000051!6.23e-10!13;CL:0000084!1.07e-09!11;CL:0000827!1.07e-09!11;CL:0000893!4.01e-08!6;CL:0002489!4.01e-08!6;CL:0000898!4.01e-08!6;CL:0000809!4.01e-08!6;CL:0000810!4.01e-08!6;CL:0000895!4.01e-08!6;CL:0000808!4.01e-08!6;CL:0000894!4.01e-08!6;CL:0000806!4.01e-08!6;CL:0000807!4.01e-08!6;CL:0000805!4.01e-08!6;CL:0002425!4.01e-08!6;CL:0002436!4.01e-08!6;CL:0002427!4.01e-08!6;CL:0002428!4.01e-08!6;CL:0002429!4.01e-08!6;CL:0002433!4.01e-08!6;CL:0002431!4.01e-08!6;CL:0002432!4.01e-08!6;CL:0000988!2.38e-07!32;CL:0002032!2.38e-07!32;CL:0000037!2.38e-07!32;CL:0000566!2.38e-07!32;CL:0000837!2.38e-07!32;CL:0000738!5.22e-07!17;CL:0002087!5.22e-07!17;CL:0000553!6.80e-07!6;CL:0000556!6.80e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,3.39e-18,25;CL:0000838,4.04e-17,12;CL:0000791,3.03e-16,9;CL:0000789,3.03e-16,9;CL:0002420,3.03e-16,9;CL:0002419,3.03e-16,9;CL:0000790,3.03e-16,9;CL:0000542,8.78e-16,13;CL:0000051,8.78e-16,13;CL:0000988,5.28e-14,32;CL:0002032,5.28e-14,32;CL:0000037,5.28e-14,32;CL:0000837,5.28e-14,32;CL:0000084,2.74e-13,11;CL:0000827,2.74e-13,11;CL:0000624,4.13e-12,8;CL:0000738,5.32e-12,17;CL:0002087,5.32e-12,17;CL:0000553,8.04e-10,6;CL:0000556,8.04e-10,6;CL:0002320,1.98e-09,46;CL:0000134,1.98e-09,46;CL:0000219,7.11e-08,54;CL:0000815,3.67e-07,1;CL:0000792,3.67e-07,1;CL:0000625,6.32e-07,1;CL:0000945,7.23e-07,1;CL:0000236,7.23e-07,1;CL:0000826,7.23e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.99e-18!48;UBERON:0004177!2.45e-18!29;UBERON:0002390!8.61e-17!45;UBERON:0003061!8.61e-17!45;UBERON:0002370!3.27e-15!23;UBERON:0000974!3.27e-15!23;UBERON:0004807!3.27e-15!23;UBERON:0005058!3.27e-15!23;UBERON:0003351!3.27e-15!23;UBERON:0009113!3.27e-15!23;UBERON:0003295!3.27e-15!23;UBERON:0009722!3.27e-15!23;UBERON:0005562!3.27e-15!23;UBERON:0007690!3.27e-15!23;UBERON:0000065!1.71e-14!41;UBERON:0006562!2.31e-14!24;UBERON:0003408!2.31e-14!24;UBERON:0001557!2.31e-14!24;UBERON:0001042!2.31e-14!24;UBERON:0008814!2.31e-14!24;UBERON:0009145!2.31e-14!24;UBERON:0001004!5.59e-14!42;UBERON:0000072!3.34e-12!27;UBERON:0002405!6.14e-11!70;UBERON:0000063!1.80e-09!35;UBERON:0003081!2.16e-09!88;UBERON:0005057!1.05e-08!51;UBERON:0000077!6.62e-07!97 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.98e-09,46;UBERON:0002193,4.35e-09,48;UBERON:0002405,4.35e-09,48;UBERON:0000029,1.20e-07,1;UBERON:0001097,1.20e-07,1;UBERON:0003968,1.20e-07,1;UBERON:0001467,1.20e-07,1;UBERON:0002390,1.23e-07,45;UBERON:0003061,1.23e-07,45 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,2.1950964985068,0.985521055061667,0.234064526321993,0.171217968225505,0.0797721589953364,4.96482116800497,1.13646523144697,0.333109761815663,0.607425802169478,0,4.57420139769445,5.75880621144103,2.97072756258621,0.0850432901510698,0,0,0.319984845586813,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17447824240415,3.62681071005672,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,2.54805239706646,0,0,0,0,0,21.2329064590681,0,0,0,0,0,0,0,0,0.289198713839823,0.884610551949874,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.923765950833023,0,0,0,0,0,0.238043640886014,0,0.157635144106191,0,0.159454768657487,0.491589944147214,1.55416483679306,0.144649058581512,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7235168460303,0,0,0,0,0,0.164549020602121,0,0,0.21183207086382,0,0.16488625294148,0,0.180938774784468,0,0,0,0,1.36696704638282,0,0,0.376736914009382,0.956859594047176,1.37266903923914,0.169978429993855,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0.102710957164827,0.389762468933385,0,0,0.240390899039938,0.147689527174577,0.201932899896295,0.15241361331,0.504130925684203,0.487289403698762,0.288635524920988,0.584384510907845,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr5:101668666..101668677,- | |||
}} |
Latest revision as of 21:31, 5 August 2015
Short description: | p@chr5:101668666..101668677, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:101668666..101668677, - |
Coexpression cluster: | MCL_coexpression_mm9:63 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 3.39e-18 | 25 |
lymphoid lineage restricted progenitor cell | 4.04e-17 | 12 |
mature alpha-beta T cell | 3.03e-16 | 9 |
alpha-beta T cell | 3.03e-16 | 9 |
immature T cell | 3.03e-16 | 9 |
mature T cell | 3.03e-16 | 9 |
immature alpha-beta T cell | 3.03e-16 | 9 |
lymphocyte | 8.78e-16 | 13 |
common lymphoid progenitor | 8.78e-16 | 13 |
hematopoietic cell | 5.28e-14 | 32 |
hematopoietic oligopotent progenitor cell | 5.28e-14 | 32 |
hematopoietic stem cell | 5.28e-14 | 32 |
hematopoietic multipotent progenitor cell | 5.28e-14 | 32 |
T cell | 2.74e-13 | 11 |
pro-T cell | 2.74e-13 | 11 |
CD4-positive, alpha-beta T cell | 4.13e-12 | 8 |
leukocyte | 5.32e-12 | 17 |
nongranular leukocyte | 5.32e-12 | 17 |
megakaryocyte progenitor cell | 8.04e-10 | 6 |
megakaryocyte | 8.04e-10 | 6 |
connective tissue cell | 1.98e-09 | 46 |
mesenchymal cell | 1.98e-09 | 46 |
motile cell | 7.11e-08 | 54 |
regulatory T cell | 3.67e-07 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 3.67e-07 | 1 |
CD8-positive, alpha-beta T cell | 6.32e-07 | 1 |
lymphocyte of B lineage | 7.23e-07 | 1 |
B cell | 7.23e-07 | 1 |
pro-B cell | 7.23e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.98e-09 | 46 |
hemolymphoid system | 4.35e-09 | 48 |
immune system | 4.35e-09 | 48 |
lymph node | 1.20e-07 | 1 |
axillary lymph node | 1.20e-07 | 1 |
peripheral lymph node | 1.20e-07 | 1 |
shoulder | 1.20e-07 | 1 |
hematopoietic system | 1.23e-07 | 45 |
blood island | 1.23e-07 | 45 |