FFCP PHASE1:Mm9::chr5:77527885..77527900,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1653|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:77527885..77527900,+|id=chr5:77527885..77527900,+|ontology_enrichment_celltype=CL:0002612!1.08e-10!3;CL:0002611!2.01e-07!2|ontology_enrichment_celltype_v019_2=CL:0002612,4.90e-53,3;CL:0000117,8.03e-13,23;CL:0000337,8.03e-13,23;CL:0002319,9.33e-11,43;CL:0000221,1.59e-10,44;CL:0000133,1.59e-10,44;CL:0002611,7.56e-10,2;CL:0000540,3.89e-09,33;CL:0000047,3.89e-09,33;CL:0000031,3.89e-09,33;CL:0000404,3.89e-09,33;CL:0000393,8.01e-08,39;CL:0000211,8.01e-08,39;CL:0002321,8.13e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001948!1.76e-16!5;UBERON:0002315!1.76e-16!5;UBERON:0003076!6.23e-16!12;UBERON:0003057!6.23e-16!12;UBERON:0002240!1.13e-13!6;UBERON:0005174!1.13e-13!6;UBERON:0001137!1.13e-13!6;UBERON:0002257!1.08e-10!3;UBERON:0002256!2.01e-07!2|ontology_enrichment_uberon_v019_2=UBERON:0001948,5.81e-56,5;UBERON:0002315,5.81e-56,5;UBERON:0002257,4.90e-53,3;UBERON:0002240,8.31e-47,6;UBERON:0005174,8.31e-47,6;UBERON:0001137,8.31e-47,6;UBERON:0003076,7.25e-24,12;UBERON:0003057,7.25e-24,12;UBERON:0000489,5.65e-14,21;UBERON:0002256,7.56e-10,2;UBERON:0002020,6.93e-09,34;UBERON:0003103,3.79e-07,43|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43752564364972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,1.10434270475807,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,1.76777151284201,2.98980529678116,2.79599168737951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0.41889341362691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0.243106717068294,0.209613162627982,0.183843508450014,0,0.412070114477788,0,0,0.25347929989024,0,0,0.0640251524048693,0.0574354689556133,0.476293691283074,0,0.38581844092741,0,0.147198920134397,0,0,0,0.145346416632329,0,0.0846146078916765,0.548783918618318,0.263069711437843,0,0.561142271657738,0,0.0985044823755635,0,0,0,0,0.233931608445408,0,0.191288332068843,0,0|short_description=p@chr5:77527885..77527900,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1653 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr5:77527885..77527900,+ | |||
|description=CAGE_peak_at_chr5:77527885..77527900,+ | |||
|id=chr5:77527885..77527900,+ | |||
|ontology_enrichment_celltype=CL:0002612!1.08e-10!3;CL:0002611!2.01e-07!2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002612,4.90e-53,3;CL:0000117,8.03e-13,23;CL:0000337,8.03e-13,23;CL:0002319,9.33e-11,43;CL:0000221,1.59e-10,44;CL:0000133,1.59e-10,44;CL:0002611,7.56e-10,2;CL:0000540,3.89e-09,33;CL:0000047,3.89e-09,33;CL:0000031,3.89e-09,33;CL:0000404,3.89e-09,33;CL:0000393,8.01e-08,39;CL:0000211,8.01e-08,39;CL:0002321,8.13e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001948!1.76e-16!5;UBERON:0002315!1.76e-16!5;UBERON:0003076!6.23e-16!12;UBERON:0003057!6.23e-16!12;UBERON:0002240!1.13e-13!6;UBERON:0005174!1.13e-13!6;UBERON:0001137!1.13e-13!6;UBERON:0002257!1.08e-10!3;UBERON:0002256!2.01e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001948,5.81e-56,5;UBERON:0002315,5.81e-56,5;UBERON:0002257,4.90e-53,3;UBERON:0002240,8.31e-47,6;UBERON:0005174,8.31e-47,6;UBERON:0001137,8.31e-47,6;UBERON:0003076,7.25e-24,12;UBERON:0003057,7.25e-24,12;UBERON:0000489,5.65e-14,21;UBERON:0002256,7.56e-10,2;UBERON:0002020,6.93e-09,34;UBERON:0003103,3.79e-07,43 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43752564364972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,1.10434270475807,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,1.76777151284201,2.98980529678116,2.79599168737951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0.41889341362691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0.243106717068294,0.209613162627982,0.183843508450014,0,0.412070114477788,0,0,0.25347929989024,0,0,0.0640251524048693,0.0574354689556133,0.476293691283074,0,0.38581844092741,0,0.147198920134397,0,0,0,0.145346416632329,0,0.0846146078916765,0.548783918618318,0.263069711437843,0,0.561142271657738,0,0.0985044823755635,0,0,0,0,0.233931608445408,0,0.191288332068843,0,0 | |||
|short_description=p@chr5:77527885..77527900,+ | |||
}} |
Latest revision as of 15:14, 4 August 2015
Short description: | p@chr5:77527885..77527900, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:77527885..77527900, + |
Coexpression cluster: | MCL_coexpression_mm9:1653 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the ventral spinal cord | 4.90e-53 | 3 |
CNS neuron (sensu Vertebrata) | 8.03e-13 | 23 |
neuroblast (sensu Vertebrata) | 8.03e-13 | 23 |
neural cell | 9.33e-11 | 43 |
ectodermal cell | 1.59e-10 | 44 |
neurectodermal cell | 1.59e-10 | 44 |
neuron of the dorsal spinal cord | 7.56e-10 | 2 |
neuron | 3.89e-09 | 33 |
neuronal stem cell | 3.89e-09 | 33 |
neuroblast | 3.89e-09 | 33 |
electrically signaling cell | 3.89e-09 | 33 |
electrically responsive cell | 8.01e-08 | 39 |
electrically active cell | 8.01e-08 | 39 |
embryonic cell | 8.13e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
regional part of spinal cord | 5.81e-56 | 5 |
gray matter of spinal cord | 5.81e-56 | 5 |
ventral horn of spinal cord | 4.90e-53 | 3 |
spinal cord | 8.31e-47 | 6 |
dorsal region element | 8.31e-47 | 6 |
dorsum | 8.31e-47 | 6 |
posterior neural tube | 7.25e-24 | 12 |
chordal neural plate | 7.25e-24 | 12 |
cavitated compound organ | 5.65e-14 | 21 |
dorsal horn of spinal cord | 7.56e-10 | 2 |
gray matter | 6.93e-09 | 34 |
compound organ | 3.79e-07 | 43 |