FFCP PHASE1:Hg19::chrX:48326707..48326733,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=92745 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18070 | |||
|TSSclassifier=strong | |||
|UniProt=C9JNK4 | |||
|association_with_transcript=-9bp_to_ENST00000440085_5end | |||
|description=CAGE_peak_4_at_SLC38A5_5end | |||
|id=chrX:48326707..48326733,- | |||
|ontology_enrichment_celltype=CL:0000055!9.43e-14!180;CL:0002371!1.48e-12!591;CL:0000680!1.81e-10!57;CL:0000056!1.81e-10!57;CL:0000355!1.81e-10!57;CL:0000192!2.00e-10!42;CL:0000514!2.00e-10!42;CL:0000187!1.19e-09!54;CL:0000183!2.52e-09!59;CL:0000144!4.13e-09!625;CL:0000393!1.72e-08!60;CL:0000211!1.72e-08!60;CL:0000359!1.99e-08!32;CL:0000548!5.83e-08!679;CL:0000004!5.83e-08!679;CL:0000255!5.83e-08!679;CL:0000012!8.92e-08!682;CL:0000057!1.76e-07!75;CL:0000220!2.21e-07!246;CL:0002321!3.53e-07!248;CL:0002368!8.07e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002368;4.06e-08;13!CL:0000359;7.74e-07;32!CL:0000192;9.69e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,3.83e-08,13;CL:0000192,4.51e-08,43;CL:0000514,4.51e-08,43;CL:0000057,5.84e-08,76;CL:0000680,1.11e-07,58;CL:0000056,1.11e-07,58;CL:0000355,1.11e-07,58;CL:0002076,1.93e-07,42;CL:0000359,2.57e-07,32;CL:0000187,3.41e-07,55;CL:0000723,6.13e-07,433 | |||
|ontology_enrichment_development_v019=CL:0000514;9.69e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000486!8.48e-15!82;UBERON:0003102!3.04e-13!95;UBERON:0000914!3.95e-13!83;UBERON:0002329!3.95e-13!83;UBERON:0003077!3.95e-13!83;UBERON:0003059!3.95e-13!83;UBERON:0007282!3.95e-13!83;UBERON:0009618!3.95e-13!83;UBERON:0007285!3.95e-13!83;UBERON:0004290!3.95e-11!70;UBERON:0001637!1.50e-10!42;UBERON:0003509!1.50e-10!42;UBERON:0004572!1.50e-10!42;UBERON:0001004!2.38e-09!72;UBERON:0004573!5.85e-09!33;UBERON:0004571!5.85e-09!33;UBERON:0001134!1.58e-08!61;UBERON:0002036!1.58e-08!61;UBERON:0003082!1.58e-08!61;UBERON:0002385!2.42e-08!63;UBERON:0001015!2.42e-08!63;UBERON:0000383!2.42e-08!63;UBERON:0004872!4.47e-08!84;UBERON:0000165!5.67e-08!28;UBERON:0000930!5.67e-08!28;UBERON:0000479!1.11e-07!787;UBERON:0001981!1.20e-07!60;UBERON:0007500!1.20e-07!60;UBERON:0004537!1.20e-07!60;UBERON:0006965!1.20e-07!60;UBERON:0000475!3.13e-07!365;UBERON:0005256!3.94e-07!143;UBERON:0001444!6.96e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0000165;3.70e-08;28!UBERON:0004573;1.56e-07;33!UBERON:0004571;1.56e-07;33!UBERON:0000161;2.27e-07;19!UBERON:0000166;2.27e-07;19!UBERON:0001737;4.18e-07;9!UBERON:0001557;4.18e-07;9!UBERON:0004923;6.56e-07;55!UBERON:0003729;7.19e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,9.45e-16,99;UBERON:0000486,2.36e-13,83;UBERON:0001004,5.48e-10,74;UBERON:0007503,7.70e-10,78;UBERON:0002329,2.43e-09,71;UBERON:0003059,2.43e-09,71;UBERON:0007282,2.43e-09,71;UBERON:0004290,2.43e-09,71;UBERON:0009618,2.43e-09,71;UBERON:0003077,5.06e-09,72;UBERON:0007285,5.06e-09,72;UBERON:0004923,9.18e-09,66;UBERON:0007524,1.03e-08,73;UBERON:0004573,2.41e-08,33;UBERON:0004571,2.41e-08,33;UBERON:0001637,2.83e-08,42;UBERON:0003509,2.83e-08,42;UBERON:0004572,2.83e-08,42;UBERON:0000165,1.32e-07,29;UBERON:0000930,1.32e-07,29;UBERON:0004119,2.85e-07,160;UBERON:0000925,2.85e-07,160;UBERON:0006595,2.85e-07,160;UBERON:0001737,3.86e-07,9;UBERON:0003729,6.93e-07,13;UBERON:0002199,8.15e-07,46;UBERON:0002416,8.15e-07,46 | |||
|phase1_expression=1.09007027562334,2.14100523890983,1.40954404095971,0,0,4.36169262050184,2.53299878168311,10.7392378482561,0.261185628199839,6.38908234903923,4.18680700783456,3.27662058195258,1.58260186937072,0.495065411840187,0,0.672325146451775,1.20538905604795,1.46062018077475,1.46379839637152,0.61560529038394,1.22400414746552,0,0,0.547497700291537,0.627713197974014,0.840547463227464,0.903106483949403,1.02324015707783,0,0,0,11.9524759182261,24.3976794210383,3.69754010166788,0.309868802321207,0.995184627411951,0.293600439334847,0,0,0,0,0,0,0,0.377875943688809,0.727752183563449,0,0,0,0,0,0.47296445977717,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853460445133014,0,0,0,0,0,0,0,0,0,1.31692042387539,0,0,0,0,0,0,0,0.111410456885174,0,0,0.270803863765016,0.384273959177026,0.260118695119756,0.164437904603676,0,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0.767175371061182,1.0843174571537,2.00535164254356,1.15877215168659,4.7717156823066,13.6257763684738,0.283604451492204,0.443458794925128,0.175669571386252,0.589405839739707,4.00724817121796,4.07862887062872,0,0,0.132957960518865,0,0,0,3.18019851786728,1.72046919021225,0.347140501607594,0,0.838998872419812,1.92582629358047,0.835979866147242,0,0,0,1.20848795132744,0.760272105718513,0.732186172644509,0.367663080345869,2.43042584364528,0.714397826272638,0.673588117878509,0.563057402416611,0,0,0.183201743930407,0,0,5.23312862571041,12.424298792383,3.54565432660823,1.72131935057184,3.15520282823695,1.41867352879343,0,2.1349799145941,1.48000529050296,0.622422070799533,0.269421344139376,0.326923806226917,0,0,0.468642863667593,3.43376084513353,5.70471821544449,6.12739590262384,1.17434498643765,1.78060238804945,2.24721290723598,5.10385428137233,3.4393608847295,1.44656093646072,1.18800285728205,1.97813543422845,5.46096817162816,1.43723628363248,4.37673896280572,2.50237039743928,5.54128230968366,2.19488810440419,2.75839016219118,0.751190294532984,2.7223723958405,2.51145489964407,2.56268866582281,1.27159140695737,0,0,1.8034837803194,1.48893485065272,11.4767905924061,2.04617710838517,3.5340728394176,1.19664868234989,0.969876340912871,0.710019185033229,0.604512589365842,0.339121184620975,25.7036934707185,20.1832129237218,19.2159078910633,0,0.265059536642971,0,0,0.252320850875628,0,4.69348596989448,3.21620469096443,2.76269842704961,0,0,4.49565840151407,3.20310911148393,7.95336398615491,5.4044046638873,5.66486554640256,5.93176547777742,5.79774625088707,3.53198637225623,8.0796902958742,0,0,0,0,0,0,0,0,0.122988438543114,0.686271241194102,19.645301088144,11.240175325762,8.1428467653421,4.16648003213383,0.651616610620649,2.07986957055916,0,0.579652024875384,0.70445216541493,0.144366447761074,0,0,0,0,0,0,0,12.185398418281,24.1894264606358,14.0357346269963,0,0,0,0,0,0.207328115540772,0,0,0.063497894292169,0,0,1.71072446022705,0.411309970813294,0.901029173531752,0.285826432630578,0.672786506072164,0,1.3200891447771,0.646358578788889,0,0,1.86156681609409,0,6.68739173081569,5.67396528093113,6.92697665441858,0,0,2.46972101034231,1.30294473717494,1.06617584622764,2.37585561880029,0,0,0,0,0,0,0,0,0,5.50168965336801,0.821905290201534,4.1184021545176,1.12085143993527,0,0,0,0.508189248444927,1.30139853857622,1.54657762555539,1.17261385734044,0.637938751653163,0,0,0,0,0,0.271265023699736,0.623912584592421,1.07057393278297,0.157702415033935,0,2.10662269809403,0,0,8.63493278096067,8.84972009000175,0.173767228936166,0.391602314925481,0,0,0,0.213455115606889,22.1283127155769,28.2940247167845,15.4219049598137,1.98486246255021,6.29194090481056,4.2099014164961,2.94720043288112,0,7.23842645146234,7.42090332224955,2.92998418225046,5.14929003408069,5.58464660893902,3.11552657510173,4.88083589531829,0,7.01772646061497,2.67034867914099,6.19998020088876,3.64182336013434,1.96686622439136,0.902399225814824,0.231046011313244,3.13739907670742,0,0,0,0.340187410553031,1.0795795805107,1.54227252690289,1.89662506280697,1.50506932156456,1.27438136522519,0.831076008928724,3.35812132083267,4.16593765627276,6.27445082459761,0.256450125116389,2.62411716559765,0,0,0,0,15.5051695258967,3.25030123018261,0,2.03008508413456,1.23238893691716,1.07452572308291,2.06754858726796,0.859361958946189,0.290033387828457,1.70453254832202,2.04773681987496,11.9005139059904,11.1470239071762,12.1232076869855,8.39609581101064,0.929691098594572,18.5739284630078,4.8792608911242,4.31247012246524,5.85536633348724,6.95946393660058,4.07713282028624,1.28812398067792,0,1.89827654831236,0,7.42103594802868,0.42793898803392,9.22789418985217,3.92474320099615,0.539617372749944,2.19629623788844,2.47406044925942,4.44801459461295,3.17020642346017,0.842516912477962,3.90106991271672,7.55511817856982,5.28250733783777,0.682499557039929,1.41405431953713,4.52032466480971,4.41092274836899,3.3171948762061,3.5076070820301,3.47265320560013,0.655894752046633,2.84074527747786,0.92947049429925,0.845086807596724,0.860468113224309,1.3754865741837,2.49669736036875,2.48332744849418,0.422215270595328,1.31717957183961,1.51789269506286,1.04980416073495,13.0862073306696,18.0981614394663,22.8671068208777,0.282431402330337,27.9828492236299,15.1624328100863,25.2755187515905,11.486170010348,0,0,0,0,0,0,0,0,0.854592569019785,0,0,0.743212700502875,0.721346064882224,1.77854608371035,0,4.98948428582042,0.191505370132367,1.90506224451495,2.921597462471,1.12318871245384,0.684704037099577,4.0736772900986,0,0.50787533340481,0.963528450622197,1.41259795033733,0.425846237690326,0.343505344755765,0.307240764308458,0.447352215784832,1.00109485027145,0,1.11362469558097,3.69262196843137,3.2454681417118,0,0,0,0.293016358543788,0,0.66866030566487,0.284136146806413,10.5047573284584,1.78178808499583,11.0577852755724,0,0.422008249231538,0,5.93293947216335,0,0.398495976502139,0,0.755798243562828,0,1.10776324914963,12.7526230941341,0.0898683511473268,0,0,0.197286811273867,0,0,0.969332746095218,0.278304294485554,1.99613798001194,0,0,0,0,0,0,0,2.04123229368278,0,0.885741385813839,0.120596438625408,0,0.110579259931225,0.591095237907095,0.438770794307945,0.653630781113941,0,0.461701551022782,0,0,0,0,4.46601623624687,2.38153742844842,4.79731298416771,0,2.5116841023204,1.16348177330109,3.15833924864053,2.15668787749514,3.35643173951685,5.69261198172555,1.74830236878417,0,0,0,0,0,0.530745387020035,0,2.37216902944498,2.34771483998355,2.71497068714184,0.404406797884062,0,0.234264445725339,0.547364367646998,0,0,0,1.20990716048664,0,0.442306057399416,0,0,0,0,0,0,0,0,0,7.34942980607832,0,0.17472666824203,0,5.03132922703243,2.77739404927505,4.76269650908614,0.387956065953678,0,0.677942222341597,0,0,0.253243183823515,0,0.400794101257669,0,0,2.88180834308212,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0.262887354279314,0.558564802544508,0,0,0.199679000498991,0,0,0,1.80149941771202,0,0.787831823072237,0.659326867049332,0.539228350833479,0,1.18542664892098,0.795229689809303,0.272406812223151,0,0,0,0,0,0.425246896606173,21.1323853187538,0.0788057072991982,0.0524545881349981,0,1.97216073266129,1.53532157855556,0.714695326373367,0,0,0,0,0,0,6.23903157694976,0,0,0,1.32506888912221,0,0.26446520348538,0,0,0.747511887973863,0.78602152549833,0.414239055347196,1.48849806543585,6.52118385263216,0,8.93677760878255,0,0,0,0,0,0,0,0,0,0.110929051536852,0.496771223531068,26.1478920029476,0,0,0,0,3.74667924645505,0,10.5970910049681,2.80455971816669,2.21922344601045,4.73507513187723,4.52822223154635,0,4.57680136793847,2.26846385644859,7.61642282855624,4.28779934969938,2.86734180894664,1.34940933649081,2.17368139626763,12.0264800273848,9.83614343864581,1.5652351854352,3.30566739793881,1.14241563650639,3.66183659884195,3.09142720644351,2.7926744831047,2.32016879939247,1.59238355479446,0,4.12074846219351,2.35724642136143,0,0,0,0,0,0,0,0,0,0.657852148736121,0.530067437837643,0,0,0,0,0,0.276516872303462,0,0,0,0,0.737318726261158,0,1.9998739585493,2.56060151265938,2.92765465423387,0,0.184105950251841,6.57433686281389,5.59869534029676,1.40683808434017,0,3.93164854639741,1.63814457288021,8.82609155760931,1.70059936081346,4.33775174906508,2.23457967189298,4.13405655849444,0.47317047000752,0,0,0,0.385375350578757,0,0,0,0.252071696221718,0.553258019713743,0.322951291263702,0,17.7647370486856,4.83675865725735,0,2.19498765685643,2.288292572803,0,2.3869946653953,0.150420656698515,0,40.6387285841208,0,0,2.06998520703863,0.337687923091973,0,0,0.253663240775627,0.546974809018219,6.030835435429,0.496211178389294,0,0,0,0.672567444437648,0,0,0.177404740325278,1.15233987555779,0,0.271878931907327,0.197318320688547,0,0,0.627944742804112,0.157115589916002,0.560544326627578,0,0,0,0.142953088353313,7.1106125279727,0.348724276104376,0,0.801711364730253,0.828864656652147,4.95083583572455,4.14755797088455,2.15113679410139,1.77498001095848,2.72682895229305,0,0,0,0,0,14.133633640595,0,0,0,0,0,0,0,0,0,8.90518185637976,0,0.385870790539723,0,0,0.245148321753905,0,0,0.297046400327086,0.4226557275834,10.0256997665812,0.563903507879121,0.257831551894309,0.599646935549574,0,0,0,0,3.21110498383179,0.143339583151451,0,0.271965960763659,0.436350690340377,0.5290268405154,2.97596014533401,0,6.92202499398063,0,0,0.506794004045748,0,0,0,0,0.0757786982182394,0,0,0.20686599172379,0.426467963801962,1.1903221573187,0.0645889098360061,0.0620747142958579,0.33639558774184,0.445530107947154,1.21270313374932,0.435433495793923,0,0.471464371102113,1.00411087549747,0.332660356546013,1.87227517805241,2.02781957167659,0,0,0,0.366724332548599,0.406896178315738,0,0.201273793591026,0.320568492303233 | |||
|short_description=p4@SLC38A5 | |||
}} |
Revision as of 05:34, 23 January 2014
Short description: | p4@SLC38A5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SLC38A5_5end |
Coexpression cluster: | NA |
Association with transcript: | -9bp_to_ENST00000440085_5end |
EntrezGene: | SLC38A5 |
HGNC: | 18070 |
UniProt: | C9JNK4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 3.83e-08 | 13 |
smooth muscle cell | 4.51e-08 | 43 |
smooth muscle myoblast | 4.51e-08 | 43 |
fibroblast | 5.84e-08 | 76 |
muscle precursor cell | 1.11e-07 | 58 |
myoblast | 1.11e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.11e-07 | 58 |
endo-epithelial cell | 1.93e-07 | 42 |
vascular associated smooth muscle cell | 2.57e-07 | 32 |
muscle cell | 3.41e-07 | 55 |
somatic stem cell | 6.13e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
surface structure | 9.45e-16 | 99 |
multilaminar epithelium | 2.36e-13 | 83 |
respiratory system | 5.48e-10 | 74 |
epithelial vesicle | 7.70e-10 | 78 |
somite | 2.43e-09 | 71 |
presomitic mesoderm | 2.43e-09 | 71 |
presumptive segmental plate | 2.43e-09 | 71 |
dermomyotome | 2.43e-09 | 71 |
trunk paraxial mesoderm | 2.43e-09 | 71 |
paraxial mesoderm | 5.06e-09 | 72 |
presumptive paraxial mesoderm | 5.06e-09 | 72 |
organ component layer | 9.18e-09 | 66 |
dense mesenchyme tissue | 1.03e-08 | 73 |
systemic artery | 2.41e-08 | 33 |
systemic arterial system | 2.41e-08 | 33 |
artery | 2.83e-08 | 42 |
arterial blood vessel | 2.83e-08 | 42 |
arterial system | 2.83e-08 | 42 |
mouth | 1.32e-07 | 29 |
stomodeum | 1.32e-07 | 29 |
endoderm-derived structure | 2.85e-07 | 160 |
endoderm | 2.85e-07 | 160 |
presumptive endoderm | 2.85e-07 | 160 |
larynx | 3.86e-07 | 9 |
mouth mucosa | 6.93e-07 | 13 |
integument | 8.15e-07 | 46 |
integumental system | 8.15e-07 | 46 |