FFCP PHASE1:Mm9::chr7:82453912..82453938,-: Difference between revisions
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{{FFCP|EntrezGene=64176|HGNC=|MCL_coexpression_id=2|UniProt=Q8BG39|association_with_transcript=209bp_to_ENSMUST00000165175,NM_153579,uc009hwl.1_5end|description=CAGE_peak_4_at_Sv2b_5end|id=chr7:82453912..82453938,-|ontology_enrichment_celltype=CL:0000540!1.04e-14!33;CL:0000047!1.04e-14!33;CL:0000031!1.04e-14!33;CL:0000404!1.04e-14!33;CL:0000221!7.61e-11!44;CL:0000133!7.61e-11!44;CL:0000117!8.15e-11!23;CL:0000337!8.15e-11!23;CL:0002319!1.59e-10!43;CL:0000393!1.75e-10!39;CL:0000211!1.75e-10!39;CL:0000055!2.38e-07!50|ontology_enrichment_celltype_v019_2=CL:0000540,4.13e-10,33;CL:0000047,4.13e-10,33;CL:0000031,4.13e-10,33;CL:0000404,4.13e-10,33;CL:0000393,7.13e-08,39;CL:0000211,7.13e-08,39;CL:0002319,1.24e-07,43;CL:0000221,2.34e-07,44;CL:0000133,2.34e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!3.00e-28!75;UBERON:0001016!3.00e-28!75;UBERON:0001017!1.05e-27!73;UBERON:0005743!1.05e-27!73;UBERON:0004121!1.76e-26!102;UBERON:0000924!1.76e-26!102;UBERON:0006601!1.76e-26!102;UBERON:0000033!4.33e-25!63;UBERON:0002346!3.59e-24!71;UBERON:0003075!3.59e-24!71;UBERON:0007284!3.59e-24!71;UBERON:0001049!3.68e-22!52;UBERON:0005068!3.68e-22!52;UBERON:0006241!3.68e-22!52;UBERON:0007135!3.68e-22!52;UBERON:0003056!1.47e-21!49;UBERON:0000955!6.58e-21!50;UBERON:0006238!6.58e-21!50;UBERON:0002616!3.83e-20!49;UBERON:0002020!1.31e-18!34;UBERON:0003080!6.89e-17!40;UBERON:0002780!3.41e-16!39;UBERON:0001890!3.41e-16!39;UBERON:0006240!3.41e-16!39;UBERON:0007811!1.59e-15!86;UBERON:0002791!2.92e-15!29;UBERON:0003528!2.92e-15!29;UBERON:0001893!2.92e-15!29;UBERON:0000153!3.07e-12!94;UBERON:0000956!6.18e-11!21;UBERON:0001869!6.18e-11!21;UBERON:0000203!6.18e-11!21;UBERON:0002021!1.10e-09!10;UBERON:0000411!1.10e-09!10;UBERON:0001950!1.10e-09!10;UBERON:0002619!1.54e-09!17|ontology_enrichment_uberon_v019_2=UBERON:0002346,9.97e-36,64;UBERON:0003075,9.97e-36,64;UBERON:0007284,9.97e-36,64;UBERON:0001016,1.54e-33,75;UBERON:0004121,3.58e-33,95;UBERON:0000924,3.58e-33,95;UBERON:0006601,3.58e-33,95;UBERON:0001017,4.16e-33,73;UBERON:0010371,2.06e-31,73;UBERON:0000073,7.28e-30,54;UBERON:0001049,2.49e-27,52;UBERON:0005068,2.49e-27,52;UBERON:0006241,2.49e-27,52;UBERON:0007135,2.49e-27,52;UBERON:0010314,1.72e-22,92;UBERON:0003056,1.23e-21,49;UBERON:0000955,1.68e-21,47;UBERON:0006238,1.68e-21,47;UBERON:0002020,2.25e-21,34;UBERON:0002616,2.95e-20,46;UBERON:0002021,1.17e-17,10;UBERON:0000411,1.17e-17,10;UBERON:0001950,1.17e-17,10;UBERON:0003080,5.99e-17,40;UBERON:0002780,7.87e-16,39;UBERON:0001890,7.87e-16,39;UBERON:0006240,7.87e-16,39;UBERON:0003528,1.43e-15,29;UBERON:0002791,1.43e-15,29;UBERON:0001893,1.43e-15,29;UBERON:0002619,3.32e-13,17;UBERON:0000956,5.38e-12,21;UBERON:0001869,5.38e-12,21;UBERON:0000203,5.38e-12,21;UBERON:0003076,1.61e-11,12;UBERON:0003057,1.61e-11,12;UBERON:0002240,4.17e-09,6;UBERON:0005174,4.17e-09,6;UBERON:0001137,4.17e-09,6;UBERON:0001948,9.82e-08,5;UBERON:0002315,9.82e-08,5;UBERON:0000025,1.80e-07,114;UBERON:0004111,5.44e-07,122;UBERON:0002950,6.67e-07,4;UBERON:0001891,6.67e-07,4;UBERON:0009616,6.67e-07,4;UBERON:0010286,6.67e-07,4|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63634199468316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0,0.633831403506179,0,0,0,0,0,0.299600110518405,0,0.518448061542388,0.810035629990144,0.210324961351382,8.2838785477103,7.73039893330647,0.734944795289724,0.479227355091182,0.919218786610021,4.40463523997555,11.1087984134113,11.366883460962,0.659431438650969,0.548925861614458,0.52091337055676,13.959149950069,6.75315132038016,8.40390362772456,7.66034322231536,7.26095572075425,2.05039390407831,0.075726193333184,1.28471652181535,0,0,0,0,0,0,0.561777680527007,0,0,0,0.563373679106722,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0.808834249737046,0,0.484875253135222,0,6.44117753425404,7.54008144528438,0,0,0,0,8.68785708547972,14.1825186873774,1.50785222535437,19.468323861535,11.7629110371952,6.85700547046548,9.89671704713322,0,0.248813941220186,0.505445516867349,7.15502310014011,0.260240885925407,0.229902104433473,0.900310649026746,1.35634336052144,3.19771546011241,5.50888997224854,6.1843138209421,28.4573707812917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.6688466566683,1.54356918568927,0,0,0,0,0.128867461322093,0.201683524623343,0,0,0,0,0,0,0.19496408711912,0,0,0.199141273254367,0,0.228497025219458,1.1270773567308,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,11.0779907091576,10.3146284201139,0,0,1.26203287766503,1.17131623288992,1.93881057959519,0.238968797952552,0.222798674082394,1.41538265394416,0.404810701674894,1.16902343164525,1.58115111178609,11.5675673911851,0.425820255624806,0,0.325773918707152,0.494910368917606,0,0,0.302323556964751,0.188605079755898,0,0,0,0.363533729477506,0,0,0,0,3.06395645178409,0.18006109403131,0,0,0.177340233642274,0.178368817602071,0.658196082408484,1.2178597964584,0,0,0,0.32977250588296,0,0.120625849856312,0.238744688006273,0.164140899745061,0,10.9400928186201,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.324016022465404,0.209088296014469,0,0.134864346384821,0.165306911450672,0,0.129614973291793,0,0,0,0,0.194451188344048,0,0,0.117357238645754,0,0,0,0,0,0,0,0.129920822977795,0.179026695667481,0.596044064343795,0.120195449519969,0.295379054349154,0,0,0,0,0.0962118416403295,0,0,0,0,0,0.579568782096571,0.375364950902364,1.46521299413812,0.214368379079066,0.501572104035363,23.1548255472997,13.3494318587081,29.2176711854092,17.1853182343688,27.4033007908257,37.0143009720953,22.2757425076496,27.0192721934532,31.7199686288943,23.8169743405837,0.103787347584177,0.399024873401031,0.170733605754134,0,0.209613162627982,0.367687016900028,0.666740183404846,0.618105171716683,0.64183841918363,0.252697211763798,0.50695859978048,1.32038438970253,0.842773567228942,0.640251524048693,0.516919220600519,0.476293691283074,0.579421629724277,0.38581844092741,0.412085900803307,0.588795680537589,1.02860775715625,1.06485483695602,0.476872379894642,1.45346416632329,0.282328141245992,0.592302255241736,1.09756783723664,0.526139422875686,0.814824683075171,0.561142271657738,0.237270036248348,0.197008964751127,1.22769312950907,0.464810523557898,0.192906610981141,0.249810577937946,0.467863216890817,0.644613162144895,0.57386499620653,0.441182838239031,0.231867835620421|short_description=p4@Sv2b}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:64176 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8BG39 | |||
|association_with_transcript=209bp_to_ENSMUST00000165175,NM_153579,uc009hwl.1_5end | |||
|cluster_id=chr7:82453912..82453938,- | |||
|description=CAGE_peak_4_at_Sv2b_5end | |||
|id=chr7:82453912..82453938,- | |||
|ontology_enrichment_celltype=CL:0000540!1.04e-14!33;CL:0000047!1.04e-14!33;CL:0000031!1.04e-14!33;CL:0000404!1.04e-14!33;CL:0000221!7.61e-11!44;CL:0000133!7.61e-11!44;CL:0000117!8.15e-11!23;CL:0000337!8.15e-11!23;CL:0002319!1.59e-10!43;CL:0000393!1.75e-10!39;CL:0000211!1.75e-10!39;CL:0000055!2.38e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,4.13e-10,33;CL:0000047,4.13e-10,33;CL:0000031,4.13e-10,33;CL:0000404,4.13e-10,33;CL:0000393,7.13e-08,39;CL:0000211,7.13e-08,39;CL:0002319,1.24e-07,43;CL:0000221,2.34e-07,44;CL:0000133,2.34e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.00e-28!75;UBERON:0001016!3.00e-28!75;UBERON:0001017!1.05e-27!73;UBERON:0005743!1.05e-27!73;UBERON:0004121!1.76e-26!102;UBERON:0000924!1.76e-26!102;UBERON:0006601!1.76e-26!102;UBERON:0000033!4.33e-25!63;UBERON:0002346!3.59e-24!71;UBERON:0003075!3.59e-24!71;UBERON:0007284!3.59e-24!71;UBERON:0001049!3.68e-22!52;UBERON:0005068!3.68e-22!52;UBERON:0006241!3.68e-22!52;UBERON:0007135!3.68e-22!52;UBERON:0003056!1.47e-21!49;UBERON:0000955!6.58e-21!50;UBERON:0006238!6.58e-21!50;UBERON:0002616!3.83e-20!49;UBERON:0002020!1.31e-18!34;UBERON:0003080!6.89e-17!40;UBERON:0002780!3.41e-16!39;UBERON:0001890!3.41e-16!39;UBERON:0006240!3.41e-16!39;UBERON:0007811!1.59e-15!86;UBERON:0002791!2.92e-15!29;UBERON:0003528!2.92e-15!29;UBERON:0001893!2.92e-15!29;UBERON:0000153!3.07e-12!94;UBERON:0000956!6.18e-11!21;UBERON:0001869!6.18e-11!21;UBERON:0000203!6.18e-11!21;UBERON:0002021!1.10e-09!10;UBERON:0000411!1.10e-09!10;UBERON:0001950!1.10e-09!10;UBERON:0002619!1.54e-09!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,9.97e-36,64;UBERON:0003075,9.97e-36,64;UBERON:0007284,9.97e-36,64;UBERON:0001016,1.54e-33,75;UBERON:0004121,3.58e-33,95;UBERON:0000924,3.58e-33,95;UBERON:0006601,3.58e-33,95;UBERON:0001017,4.16e-33,73;UBERON:0010371,2.06e-31,73;UBERON:0000073,7.28e-30,54;UBERON:0001049,2.49e-27,52;UBERON:0005068,2.49e-27,52;UBERON:0006241,2.49e-27,52;UBERON:0007135,2.49e-27,52;UBERON:0010314,1.72e-22,92;UBERON:0003056,1.23e-21,49;UBERON:0000955,1.68e-21,47;UBERON:0006238,1.68e-21,47;UBERON:0002020,2.25e-21,34;UBERON:0002616,2.95e-20,46;UBERON:0002021,1.17e-17,10;UBERON:0000411,1.17e-17,10;UBERON:0001950,1.17e-17,10;UBERON:0003080,5.99e-17,40;UBERON:0002780,7.87e-16,39;UBERON:0001890,7.87e-16,39;UBERON:0006240,7.87e-16,39;UBERON:0003528,1.43e-15,29;UBERON:0002791,1.43e-15,29;UBERON:0001893,1.43e-15,29;UBERON:0002619,3.32e-13,17;UBERON:0000956,5.38e-12,21;UBERON:0001869,5.38e-12,21;UBERON:0000203,5.38e-12,21;UBERON:0003076,1.61e-11,12;UBERON:0003057,1.61e-11,12;UBERON:0002240,4.17e-09,6;UBERON:0005174,4.17e-09,6;UBERON:0001137,4.17e-09,6;UBERON:0001948,9.82e-08,5;UBERON:0002315,9.82e-08,5;UBERON:0000025,1.80e-07,114;UBERON:0004111,5.44e-07,122;UBERON:0002950,6.67e-07,4;UBERON:0001891,6.67e-07,4;UBERON:0009616,6.67e-07,4;UBERON:0010286,6.67e-07,4 | |||
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63634199468316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0,0.633831403506179,0,0,0,0,0,0.299600110518405,0,0.518448061542388,0.810035629990144,0.210324961351382,8.2838785477103,7.73039893330647,0.734944795289724,0.479227355091182,0.919218786610021,4.40463523997555,11.1087984134113,11.366883460962,0.659431438650969,0.548925861614458,0.52091337055676,13.959149950069,6.75315132038016,8.40390362772456,7.66034322231536,7.26095572075425,2.05039390407831,0.075726193333184,1.28471652181535,0,0,0,0,0,0,0.561777680527007,0,0,0,0.563373679106722,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0.808834249737046,0,0.484875253135222,0,6.44117753425404,7.54008144528438,0,0,0,0,8.68785708547972,14.1825186873774,1.50785222535437,19.468323861535,11.7629110371952,6.85700547046548,9.89671704713322,0,0.248813941220186,0.505445516867349,7.15502310014011,0.260240885925407,0.229902104433473,0.900310649026746,1.35634336052144,3.19771546011241,5.50888997224854,6.1843138209421,28.4573707812917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.6688466566683,1.54356918568927,0,0,0,0,0.128867461322093,0.201683524623343,0,0,0,0,0,0,0.19496408711912,0,0,0.199141273254367,0,0.228497025219458,1.1270773567308,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,11.0779907091576,10.3146284201139,0,0,1.26203287766503,1.17131623288992,1.93881057959519,0.238968797952552,0.222798674082394,1.41538265394416,0.404810701674894,1.16902343164525,1.58115111178609,11.5675673911851,0.425820255624806,0,0.325773918707152,0.494910368917606,0,0,0.302323556964751,0.188605079755898,0,0,0,0.363533729477506,0,0,0,0,3.06395645178409,0.18006109403131,0,0,0.177340233642274,0.178368817602071,0.658196082408484,1.2178597964584,0,0,0,0.32977250588296,0,0.120625849856312,0.238744688006273,0.164140899745061,0,10.9400928186201,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.324016022465404,0.209088296014469,0,0.134864346384821,0.165306911450672,0,0.129614973291793,0,0,0,0,0.194451188344048,0,0,0.117357238645754,0,0,0,0,0,0,0,0.129920822977795,0.179026695667481,0.596044064343795,0.120195449519969,0.295379054349154,0,0,0,0,0.0962118416403295,0,0,0,0,0,0.579568782096571,0.375364950902364,1.46521299413812,0.214368379079066,0.501572104035363,23.1548255472997,13.3494318587081,29.2176711854092,17.1853182343688,27.4033007908257,37.0143009720953,22.2757425076496,27.0192721934532,31.7199686288943,23.8169743405837,0.103787347584177,0.399024873401031,0.170733605754134,0,0.209613162627982,0.367687016900028,0.666740183404846,0.618105171716683,0.64183841918363,0.252697211763798,0.50695859978048,1.32038438970253,0.842773567228942,0.640251524048693,0.516919220600519,0.476293691283074,0.579421629724277,0.38581844092741,0.412085900803307,0.588795680537589,1.02860775715625,1.06485483695602,0.476872379894642,1.45346416632329,0.282328141245992,0.592302255241736,1.09756783723664,0.526139422875686,0.814824683075171,0.561142271657738,0.237270036248348,0.197008964751127,1.22769312950907,0.464810523557898,0.192906610981141,0.249810577937946,0.467863216890817,0.644613162144895,0.57386499620653,0.441182838239031,0.231867835620421 | |||
|short_description=p4@Sv2b | |||
}} |
Revision as of 14:08, 5 August 2015
Short description: | p4@Sv2b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Sv2b_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 209bp_to_ENSMUST00000165175, NM_153579, uc009hwl.1_5end |
EntrezGene: | 64176 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 4.13e-10 | 33 |
neuronal stem cell | 4.13e-10 | 33 |
neuroblast | 4.13e-10 | 33 |
electrically signaling cell | 4.13e-10 | 33 |
electrically responsive cell | 7.13e-08 | 39 |
electrically active cell | 7.13e-08 | 39 |
neural cell | 1.24e-07 | 43 |
ectodermal cell | 2.34e-07 | 44 |
neurectodermal cell | 2.34e-07 | 44 |