FFCP PHASE1:Mm9::chr9:104469063..104469075,+: Difference between revisions
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{{FFCP|EntrezGene=74020|HGNC=|MCL_coexpression_id=3199|UniProt=D3Z5V2|association_with_transcript=56bp_to_ENSMUST00000157006_5end|description=CAGE_peak_7_at_Cpne4_5end|id=chr9:104469063..104469075,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002610,1.83e-22,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!3.83e-16!50;UBERON:0006238!3.83e-16!50;UBERON:0002616!5.35e-15!49;UBERON:0000033!8.76e-15!63;UBERON:0002791!1.37e-14!29;UBERON:0003528!1.37e-14!29;UBERON:0001893!1.37e-14!29;UBERON:0002780!1.16e-13!39;UBERON:0001890!1.16e-13!39;UBERON:0006240!1.16e-13!39;UBERON:0003080!3.61e-13!40;UBERON:0000956!5.05e-13!21;UBERON:0001869!5.05e-13!21;UBERON:0000203!5.05e-13!21;UBERON:0002020!1.12e-11!34;UBERON:0003056!1.04e-10!49;UBERON:0002619!2.05e-10!17;UBERON:0000073!5.66e-10!75;UBERON:0001016!5.66e-10!75;UBERON:0001049!1.12e-09!52;UBERON:0005068!1.12e-09!52;UBERON:0006241!1.12e-09!52;UBERON:0007135!1.12e-09!52;UBERON:0001017!1.20e-09!73;UBERON:0005743!1.20e-09!73;UBERON:0004121!1.21e-09!102;UBERON:0000924!1.21e-09!102;UBERON:0006601!1.21e-09!102;UBERON:0007811!1.75e-09!86;UBERON:0000153!5.31e-08!94;UBERON:0002021!9.35e-08!10;UBERON:0000411!9.35e-08!10;UBERON:0001950!9.35e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0004684,1.83e-22,3;UBERON:0002275,1.83e-22,3;UBERON:0000073,9.14e-13,54;UBERON:0001017,2.97e-11,73;UBERON:0001016,6.30e-11,75;UBERON:0000955,2.08e-09,47;UBERON:0006238,2.08e-09,47;UBERON:0003528,5.24e-09,29;UBERON:0002791,5.24e-09,29;UBERON:0001893,5.24e-09,29;UBERON:0001851,6.23e-09,1;UBERON:0005889,6.23e-09,1;UBERON:0000956,6.77e-09,21;UBERON:0001869,6.77e-09,21;UBERON:0000203,6.77e-09,21;UBERON:0002780,7.95e-09,39;UBERON:0001890,7.95e-09,39;UBERON:0006240,7.95e-09,39;UBERON:0003080,1.36e-08,40;UBERON:0004121,2.06e-08,95;UBERON:0000924,2.06e-08,95;UBERON:0006601,2.06e-08,95;UBERON:0002020,1.22e-07,34;UBERON:0002616,2.09e-07,46;UBERON:0002619,2.81e-07,17;UBERON:0003056,6.38e-07,49|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0,0.210324961351382,0,0,0.489963196859816,0.479227355091182,0,1.10115880999389,1.91531007127782,2.4577045320999,0.131886287730194,0,0,0,0,0.61119299110724,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.704217098883403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83000241127451,0.376963056338593,2.60736480288415,2.81287003063364,1.0389402227978,0.486723789203273,0,0,0,0,0,0,0.180062129805349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.88362758251398,5.14523061896422,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0.807322133479528,0.542816324353403,0.119372344003136,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0.460325236507177,1.14579102687879,0,0.685082519770642,0,0.675022500231806,0.900642406448441,0.906284817968409,0,0,0,0.170733605754134,0,0,0.183843508450014,0.222246727801615,0,0.320919209591815,0,0,0.188626341386076,0.0936415074698824,0.128050304809739,0.17230640686684,0.476293691283074,0,0.192909220463705,0,0.294397840268795,0,0.354951612318675,0,0.145346416632329,0.0941093804153306,0.25384382367503,0.365855945745545,0.263069711437843,0,0,0.118635018124174,0.0985044823755635,0.409231043169689,0,0.192906610981141,0,0,0.214871054048298,0.191288332068843,0,0|short_description=p7@Cpne4}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:74020 | |||
|HGNC= | |||
|MCL_coexpression_id=3199 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:D3Z5V2 | |||
|association_with_transcript=56bp_to_ENSMUST00000157006_5end | |||
|cluster_id=chr9:104469063..104469075,+ | |||
|description=CAGE_peak_7_at_Cpne4_5end | |||
|id=chr9:104469063..104469075,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,1.83e-22,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!3.83e-16!50;UBERON:0006238!3.83e-16!50;UBERON:0002616!5.35e-15!49;UBERON:0000033!8.76e-15!63;UBERON:0002791!1.37e-14!29;UBERON:0003528!1.37e-14!29;UBERON:0001893!1.37e-14!29;UBERON:0002780!1.16e-13!39;UBERON:0001890!1.16e-13!39;UBERON:0006240!1.16e-13!39;UBERON:0003080!3.61e-13!40;UBERON:0000956!5.05e-13!21;UBERON:0001869!5.05e-13!21;UBERON:0000203!5.05e-13!21;UBERON:0002020!1.12e-11!34;UBERON:0003056!1.04e-10!49;UBERON:0002619!2.05e-10!17;UBERON:0000073!5.66e-10!75;UBERON:0001016!5.66e-10!75;UBERON:0001049!1.12e-09!52;UBERON:0005068!1.12e-09!52;UBERON:0006241!1.12e-09!52;UBERON:0007135!1.12e-09!52;UBERON:0001017!1.20e-09!73;UBERON:0005743!1.20e-09!73;UBERON:0004121!1.21e-09!102;UBERON:0000924!1.21e-09!102;UBERON:0006601!1.21e-09!102;UBERON:0007811!1.75e-09!86;UBERON:0000153!5.31e-08!94;UBERON:0002021!9.35e-08!10;UBERON:0000411!9.35e-08!10;UBERON:0001950!9.35e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,1.83e-22,3;UBERON:0002275,1.83e-22,3;UBERON:0000073,9.14e-13,54;UBERON:0001017,2.97e-11,73;UBERON:0001016,6.30e-11,75;UBERON:0000955,2.08e-09,47;UBERON:0006238,2.08e-09,47;UBERON:0003528,5.24e-09,29;UBERON:0002791,5.24e-09,29;UBERON:0001893,5.24e-09,29;UBERON:0001851,6.23e-09,1;UBERON:0005889,6.23e-09,1;UBERON:0000956,6.77e-09,21;UBERON:0001869,6.77e-09,21;UBERON:0000203,6.77e-09,21;UBERON:0002780,7.95e-09,39;UBERON:0001890,7.95e-09,39;UBERON:0006240,7.95e-09,39;UBERON:0003080,1.36e-08,40;UBERON:0004121,2.06e-08,95;UBERON:0000924,2.06e-08,95;UBERON:0006601,2.06e-08,95;UBERON:0002020,1.22e-07,34;UBERON:0002616,2.09e-07,46;UBERON:0002619,2.81e-07,17;UBERON:0003056,6.38e-07,49 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0,0.210324961351382,0,0,0.489963196859816,0.479227355091182,0,1.10115880999389,1.91531007127782,2.4577045320999,0.131886287730194,0,0,0,0,0.61119299110724,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.704217098883403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83000241127451,0.376963056338593,2.60736480288415,2.81287003063364,1.0389402227978,0.486723789203273,0,0,0,0,0,0,0.180062129805349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.88362758251398,5.14523061896422,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0.807322133479528,0.542816324353403,0.119372344003136,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0.460325236507177,1.14579102687879,0,0.685082519770642,0,0.675022500231806,0.900642406448441,0.906284817968409,0,0,0,0.170733605754134,0,0,0.183843508450014,0.222246727801615,0,0.320919209591815,0,0,0.188626341386076,0.0936415074698824,0.128050304809739,0.17230640686684,0.476293691283074,0,0.192909220463705,0,0.294397840268795,0,0.354951612318675,0,0.145346416632329,0.0941093804153306,0.25384382367503,0.365855945745545,0.263069711437843,0,0,0.118635018124174,0.0985044823755635,0.409231043169689,0,0.192906610981141,0,0,0.214871054048298,0.191288332068843,0,0 | |||
|short_description=p7@Cpne4 | |||
}} |
Revision as of 11:28, 4 August 2015
Short description: | p7@Cpne4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Cpne4_5end |
Coexpression cluster: | MCL_coexpression_mm9:3199 |
Association with transcript: | 56bp_to_ENSMUST00000157006_5end |
EntrezGene: | 74020 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 1.83e-22 | 3 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 1.83e-22 | 3 |
reticular formation | 1.83e-22 | 3 |
regional part of nervous system | 9.14e-13 | 54 |
central nervous system | 2.97e-11 | 73 |
nervous system | 6.30e-11 | 75 |
brain | 2.08e-09 | 47 |
future brain | 2.08e-09 | 47 |
brain grey matter | 5.24e-09 | 29 |
regional part of telencephalon | 5.24e-09 | 29 |
telencephalon | 5.24e-09 | 29 |
cortex | 6.23e-09 | 1 |
zygote cortex | 6.23e-09 | 1 |
cerebral cortex | 6.77e-09 | 21 |
cerebral hemisphere | 6.77e-09 | 21 |
pallium | 6.77e-09 | 21 |
regional part of forebrain | 7.95e-09 | 39 |
forebrain | 7.95e-09 | 39 |
future forebrain | 7.95e-09 | 39 |
anterior neural tube | 1.36e-08 | 40 |
ectoderm-derived structure | 2.06e-08 | 95 |
ectoderm | 2.06e-08 | 95 |
presumptive ectoderm | 2.06e-08 | 95 |
gray matter | 1.22e-07 | 34 |
regional part of brain | 2.09e-07 | 46 |
regional part of cerebral cortex | 2.81e-07 | 17 |
pre-chordal neural plate | 6.38e-07 | 49 |