Personal tools

FFCP PHASE1:Mm9::chrX:154136917..154136945,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP|EntrezGene=66106|HGNC=|MCL_coexpression_id=70|UniProt=Q9DC77|association_with_transcript=12bp_to_NM_001252591,NM_025357,NR_045569_5end|description=CAGE_peak_5_at_Smpx_5end|id=chrX:154136917..154136945,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000991!3.62e-13!18;UBERON:0005564!3.62e-13!18;UBERON:0004176!1.82e-12!17;UBERON:0009196!1.82e-12!17;UBERON:0009117!1.82e-12!17;UBERON:0000473!1.28e-10!14;UBERON:0003101!9.33e-10!16;UBERON:0000079!9.33e-10!16;UBERON:0003135!1.82e-09!15;UBERON:0005156!8.05e-09!26;UBERON:0000990!8.05e-09!26;UBERON:0003133!1.93e-08!24;UBERON:0007100!2.26e-08!18;UBERON:0000948!2.26e-08!18;UBERON:0005498!2.26e-08!18;UBERON:0004140!2.26e-08!18;UBERON:0009881!2.26e-08!18;UBERON:0004141!2.26e-08!18;UBERON:0003084!2.26e-08!18;UBERON:0007005!2.26e-08!18;UBERON:0004139!2.26e-08!18;UBERON:0004291!2.26e-08!18;UBERON:0001048!2.74e-07!147;UBERON:0002323!4.93e-07!37;UBERON:0004458!4.93e-07!37|ontology_enrichment_uberon_v019_2=UBERON:0000991,3.63e-16,18;UBERON:0005564,3.63e-16,18;UBERON:0004176,3.08e-15,17;UBERON:0009196,3.08e-15,17;UBERON:0009117,3.08e-15,17;UBERON:0000473,8.76e-13,14;UBERON:0003101,5.35e-12,16;UBERON:0000079,5.35e-12,16;UBERON:0003135,1.32e-11,15;UBERON:0007100,4.11e-11,18;UBERON:0000948,4.11e-11,18;UBERON:0005498,4.11e-11,18;UBERON:0004140,4.11e-11,18;UBERON:0009881,4.11e-11,18;UBERON:0004141,4.11e-11,18;UBERON:0003084,4.11e-11,18;UBERON:0007005,4.11e-11,18;UBERON:0004139,4.11e-11,18;UBERON:0004291,4.11e-11,18;UBERON:0003133,1.61e-10,24;UBERON:0005156,2.79e-10,26;UBERON:0000990,2.79e-10,26;UBERON:0000926,5.17e-09,120;UBERON:0004120,5.17e-09,120;UBERON:0006603,5.17e-09,120;UBERON:0002323,5.17e-08,37;UBERON:0004458,5.17e-08,37;UBERON:0003886,1.26e-07,38;UBERON:0004535,1.34e-07,23;UBERON:0001009,1.34e-07,23;UBERON:0002553,2.93e-07,39;UBERON:0001048,4.97e-07,134|phase1_expression=62.7783480650792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.69493507722195,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.57836046138721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510749352340751,0.153606533256243,0,0,0,0.279182999001381,0,0,0,0,0,0,0,0,0,0,0,0,0,3.37066608316204,0,0,0,40.2812180561306,0,0,0,0,0,0,1.37020655662872,0,4.89859058913922,0.520455980298408,3.04465478312141,5.99600292865752,5.87818298155228,5.40908052824242,1.63366568728578,0,0.433798070759735,0.884610551949874,1.13236794963186,2.42925670306433,0,0,2.04946557908083,2.09446706813455,0.255457055208591,0,0,0,0.449371918214468,0,0,0,0,0.41557608911912,0,1.01839363850316,0.124406970610093,0,1.05220927943237,0.130120442962704,0.229902104433473,0.360124259610698,1.05493372485001,0.340182495756639,0.768682321709099,0.281105173679186,0.776110112217047,0,0,0.351902248327898,1.31517439456545,2.78047249225598,8.00979983000983,6.58502836505419,7.16523360546575,0,0,0,4.97101854085205,5.39409937956521,8.28285482720668,7.10234206755631,6.49321964766433,6.63348585415727,6.74348439776183,4.82892122519315,5.02090972178829,1.97471819896177,2.29834449710733,2.91847714365081,4.67839959761063,4.83010253640311,3.89198614405078,0,0,0,0,0.213288250535234,0,0.128867461322093,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0.189667900953082,0.456994050438915,0,0,0,0.140271639780637,0.0632365371242573,0.147610147979602,0,0.123397163921801,0,0.333690211432188,0,0,0.202860121388503,0,0,0,0,0,0,0,0.624075346229121,0,0,0,0.184753190166605,3.03186258832776,2.44447464663039,2.71592137240301,3.52035372432753,2.34508760418542,0.476087281772027,0.390267295715598,0.315270288212382,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0.551873492609465,0,0.117211686592203,0,8.58401152494868,0,0,0,0,0,0,0,0,0,0,9.79386587937053,4.27357448801413,4.0721739838394,0.329940245945071,0,0,0,1.13163047853539,0.295301892880773,0.307435147943927,1.29214146584111,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,1.98475558249466,0.65954501176592,7.10443477461984,1.02531972377865,0.358117032009409,0.164140899745061,0,0,0.170870880797853,9.28740905834501,13.3340059706192,0,0,0,0,0,0,0,0,0.203319467126849,1.08005340821801,0.418176592028937,0.218362563746178,0.404593039154462,0.165306911450672,0.523511883968059,0,0,34.3852692597356,10.9147078612105,14.5603471602246,11.6670713006429,10.8494251721294,13.1785777882807,18.1903719900919,27.0825120475416,91.4373483392199,71.0257315228458,41.7643509073905,0,0,0.205421914329655,0.25984164595559,0.179026695667481,0.198681354781265,0,0,0,0.0762068066549998,0,0,0,0,4.76133805591944,0,0,0,0,0,0,0,52.1634988196778,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0,0.512200817262403,2.67417388775123,1.46729213839588,3.49302666055027,2.44471400581777,1.85431551515005,3.53011130550997,2.52697211763797,3.54871019846336,1.50901073108861,1.40462261204824,2.04880487695582,2.52716063404698,1.90517476513229,2.31768651889711,2.89363830695558,1.23625770240992,3.38557516309114,2.40008476669791,2.66213709239006,2.86123427936785,2.32554266611726,2.91739079287525,2.28459441307527,2.74391959309159,2.63069711437843,1.90125759384206,0.561142271657738,1.54225523561426,1.37906275325789,0.818462086339379,1.23949472948773,3.47231899766054,1.24905288968973,2.33931608445408,2.36358159453128,1.91288332068843,1.32354851471709,4.17362104116759|short_description=p5@Smpx}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:66106
|HGNC=
|MCL_coexpression_id=70
|TSSclassifier=NA
|UniProt=uniprot:Q9DC77
|association_with_transcript=12bp_to_NM_001252591,NM_025357,NR_045569_5end
|cluster_id=chrX:154136917..154136945,+
|description=CAGE_peak_5_at_Smpx_5end
|id=chrX:154136917..154136945,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000991!3.62e-13!18;UBERON:0005564!3.62e-13!18;UBERON:0004176!1.82e-12!17;UBERON:0009196!1.82e-12!17;UBERON:0009117!1.82e-12!17;UBERON:0000473!1.28e-10!14;UBERON:0003101!9.33e-10!16;UBERON:0000079!9.33e-10!16;UBERON:0003135!1.82e-09!15;UBERON:0005156!8.05e-09!26;UBERON:0000990!8.05e-09!26;UBERON:0003133!1.93e-08!24;UBERON:0007100!2.26e-08!18;UBERON:0000948!2.26e-08!18;UBERON:0005498!2.26e-08!18;UBERON:0004140!2.26e-08!18;UBERON:0009881!2.26e-08!18;UBERON:0004141!2.26e-08!18;UBERON:0003084!2.26e-08!18;UBERON:0007005!2.26e-08!18;UBERON:0004139!2.26e-08!18;UBERON:0004291!2.26e-08!18;UBERON:0001048!2.74e-07!147;UBERON:0002323!4.93e-07!37;UBERON:0004458!4.93e-07!37
|ontology_enrichment_uberon_v019_2=UBERON:0000991,3.63e-16,18;UBERON:0005564,3.63e-16,18;UBERON:0004176,3.08e-15,17;UBERON:0009196,3.08e-15,17;UBERON:0009117,3.08e-15,17;UBERON:0000473,8.76e-13,14;UBERON:0003101,5.35e-12,16;UBERON:0000079,5.35e-12,16;UBERON:0003135,1.32e-11,15;UBERON:0007100,4.11e-11,18;UBERON:0000948,4.11e-11,18;UBERON:0005498,4.11e-11,18;UBERON:0004140,4.11e-11,18;UBERON:0009881,4.11e-11,18;UBERON:0004141,4.11e-11,18;UBERON:0003084,4.11e-11,18;UBERON:0007005,4.11e-11,18;UBERON:0004139,4.11e-11,18;UBERON:0004291,4.11e-11,18;UBERON:0003133,1.61e-10,24;UBERON:0005156,2.79e-10,26;UBERON:0000990,2.79e-10,26;UBERON:0000926,5.17e-09,120;UBERON:0004120,5.17e-09,120;UBERON:0006603,5.17e-09,120;UBERON:0002323,5.17e-08,37;UBERON:0004458,5.17e-08,37;UBERON:0003886,1.26e-07,38;UBERON:0004535,1.34e-07,23;UBERON:0001009,1.34e-07,23;UBERON:0002553,2.93e-07,39;UBERON:0001048,4.97e-07,134
|phase1_expression=62.7783480650792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.69493507722195,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.57836046138721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510749352340751,0.153606533256243,0,0,0,0.279182999001381,0,0,0,0,0,0,0,0,0,0,0,0,0,3.37066608316204,0,0,0,40.2812180561306,0,0,0,0,0,0,1.37020655662872,0,4.89859058913922,0.520455980298408,3.04465478312141,5.99600292865752,5.87818298155228,5.40908052824242,1.63366568728578,0,0.433798070759735,0.884610551949874,1.13236794963186,2.42925670306433,0,0,2.04946557908083,2.09446706813455,0.255457055208591,0,0,0,0.449371918214468,0,0,0,0,0.41557608911912,0,1.01839363850316,0.124406970610093,0,1.05220927943237,0.130120442962704,0.229902104433473,0.360124259610698,1.05493372485001,0.340182495756639,0.768682321709099,0.281105173679186,0.776110112217047,0,0,0.351902248327898,1.31517439456545,2.78047249225598,8.00979983000983,6.58502836505419,7.16523360546575,0,0,0,4.97101854085205,5.39409937956521,8.28285482720668,7.10234206755631,6.49321964766433,6.63348585415727,6.74348439776183,4.82892122519315,5.02090972178829,1.97471819896177,2.29834449710733,2.91847714365081,4.67839959761063,4.83010253640311,3.89198614405078,0,0,0,0,0.213288250535234,0,0.128867461322093,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0.189667900953082,0.456994050438915,0,0,0,0.140271639780637,0.0632365371242573,0.147610147979602,0,0.123397163921801,0,0.333690211432188,0,0,0.202860121388503,0,0,0,0,0,0,0,0.624075346229121,0,0,0,0.184753190166605,3.03186258832776,2.44447464663039,2.71592137240301,3.52035372432753,2.34508760418542,0.476087281772027,0.390267295715598,0.315270288212382,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0.551873492609465,0,0.117211686592203,0,8.58401152494868,0,0,0,0,0,0,0,0,0,0,9.79386587937053,4.27357448801413,4.0721739838394,0.329940245945071,0,0,0,1.13163047853539,0.295301892880773,0.307435147943927,1.29214146584111,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,1.98475558249466,0.65954501176592,7.10443477461984,1.02531972377865,0.358117032009409,0.164140899745061,0,0,0.170870880797853,9.28740905834501,13.3340059706192,0,0,0,0,0,0,0,0,0.203319467126849,1.08005340821801,0.418176592028937,0.218362563746178,0.404593039154462,0.165306911450672,0.523511883968059,0,0,34.3852692597356,10.9147078612105,14.5603471602246,11.6670713006429,10.8494251721294,13.1785777882807,18.1903719900919,27.0825120475416,91.4373483392199,71.0257315228458,41.7643509073905,0,0,0.205421914329655,0.25984164595559,0.179026695667481,0.198681354781265,0,0,0,0.0762068066549998,0,0,0,0,4.76133805591944,0,0,0,0,0,0,0,52.1634988196778,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0,0.512200817262403,2.67417388775123,1.46729213839588,3.49302666055027,2.44471400581777,1.85431551515005,3.53011130550997,2.52697211763797,3.54871019846336,1.50901073108861,1.40462261204824,2.04880487695582,2.52716063404698,1.90517476513229,2.31768651889711,2.89363830695558,1.23625770240992,3.38557516309114,2.40008476669791,2.66213709239006,2.86123427936785,2.32554266611726,2.91739079287525,2.28459441307527,2.74391959309159,2.63069711437843,1.90125759384206,0.561142271657738,1.54225523561426,1.37906275325789,0.818462086339379,1.23949472948773,3.47231899766054,1.24905288968973,2.33931608445408,2.36358159453128,1.91288332068843,1.32354851471709,4.17362104116759
|short_description=p5@Smpx
}}

Revision as of 03:00, 6 August 2015

Short description:p5@Smpx
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Smpx_5end
Coexpression cluster:MCL_coexpression_mm9:70
Association with transcript: 12bp_to_NM_001252591, NM_025357, NR_045569_5end
EntrezGene:66106
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Smpx

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G762.78
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A39.69
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.58
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.51
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.37
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G640.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.37
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D74.90
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D63.04
adrenal gland, embryo E17.CNhs11043.1263-45I16.00
adrenal gland, embryo E18.CNhs11026.1262-18F55.88
adrenal gland, neonate N00.CNhs11191.1311-23C15.41
adrenal gland, neonate N25.CNhs11223.1377-27I31.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F51.13
bone (os femoris), neonate N16.CNhs11225.1525-43A62.43
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.05
cerebellum, neonate N30.CNhs11135.1395-42I22.09
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.02
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C60.34
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E72.78
forelimb, embryo E17.CNhs10598.1517-43C48.01
forelimb, embryo E18.CNhs11008.1520-43B56.59
gonad, embryo E13.CNhs11044.1564-45I67.17
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E94.97
heart, embryo E12.CNhs11015.353-12F55.39
heart, embryo E13.CNhs11013.376-3I98.28
heart, embryo E14.CNhs10597.403-26D47.10
heart, embryo E15.CNhs11017.431-16C86.49
heart, embryo E16.CNhs11021.457-17C66.63
heart, embryo E17.CNhs11025.479-18E56.74
heart, embryo E18.CNhs11030.1283-20G34.83
heart, neonate N00.CNhs11213.639-21E35.02
heart, neonate N03.CNhs11221.1349-25I21.97
heart, neonate N10.CNhs11118.749-24G12.30
heart, neonate N16.CNhs11209.782-15G12.92
heart, neonate N20.CNhs11127.821-26I64.68
heart, neonate N25.CNhs11196.1351-25D34.83
heart, neonate N30.CNhs11202.1390-42D23.89
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G23.03
lung, embryo E14.CNhs10604.404-26F82.44
lung, embryo E15.CNhs11020.432-17C52.72
lung, embryo E16.CNhs10998.458-17B63.52
lung, embryo E17.CNhs10605.480-44A62.35
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C28.58
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I79.79
ovary, embryo E18.CNhs11040.505-44H74.27
ovary, neonate N00.CNhs11217.1299-22I44.07
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F81.98
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G47.10
skin, neonate N03.CNhs11215.662-22H31.03
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C19.29
spleen, embryo E18.CNhs11011.1271-21F213.33
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D41.08
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G534.39
testis, embryo E13.CNhs11031.389-23F510.91
testis, embryo E15.CNhs11034.443-27C514.56
testis, embryo E16.CNhs11033.470-26G511.67
testis, embryo E17.CNhs11029.486-18I510.85
testis, embryo E18.CNhs11027.503-18G513.18
testis, neonate N00.CNhs11189.1300-22B718.19
testis, neonate N07.CNhs11222.726-26I427.08
testis, neonate N10.CNhs11204.763-44D991.44
testis, neonate N20.CNhs11110.839-18H371.03
testis, neonate N30.CNhs11130.1391-42E241.76
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B44.76
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F852.16
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D22.67
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F23.49
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.32
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.39
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.66
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.33
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.92
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F93.47
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B32.34
whole body, neonate N00.CNhs10525.657-19C22.36
whole body, neonate N01.CNhs10576.659-23C61.91
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B44.17





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
gonad3.63e-1618
gonad primordium3.63e-1618
external genitalia3.08e-1517
indifferent external genitalia3.08e-1517
indifferent gonad3.08e-1517
testis8.76e-1314
male organism5.35e-1216
male reproductive system5.35e-1216
male reproductive organ1.32e-1115
primary circulatory organ4.11e-1118
heart4.11e-1118
primitive heart tube4.11e-1118
primary heart field4.11e-1118
anterior lateral plate mesoderm4.11e-1118
heart tube4.11e-1118
heart primordium4.11e-1118
cardiac mesoderm4.11e-1118
cardiogenic plate4.11e-1118
heart rudiment4.11e-1118
reproductive organ1.61e-1024
reproductive structure2.79e-1026
reproductive system2.79e-1026
mesoderm5.17e-09120
mesoderm-derived structure5.17e-09120
presumptive mesoderm5.17e-09120
body cavity5.17e-0837
body cavity or lining5.17e-0837
body cavity precursor1.26e-0738
cardiovascular system1.34e-0723
circulatory system1.34e-0723
anatomical cavity2.93e-0739
primordium4.97e-07134
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chrX:154136917..154136945,%2B&oldid=3972288"