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FFCP PHASE1:Mm9::chrX:5977194..5977227,+: Difference between revisions

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{{FFCP|EntrezGene=208431|HGNC=|MCL_coexpression_id=3757|UniProt=Q1W617|association_with_transcript=-35bp_to_NM_001040459,uc009sky.1_5end|description=CAGE_peak_4_at_Shroom4_5end|id=chrX:5977194..5977227,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005157!1.21e-08!27;UBERON:0002048!5.60e-08!14;UBERON:0000117!5.60e-08!14;UBERON:0000171!5.60e-08!14;UBERON:0000170!5.60e-08!14;UBERON:0005597!5.60e-08!14;UBERON:0000118!5.60e-08!14;UBERON:0005178!7.96e-08!17;UBERON:0005181!7.96e-08!17;UBERON:0002224!7.96e-08!17;UBERON:0000915!7.96e-08!17;UBERON:0008947!7.96e-08!17;UBERON:0003258!7.96e-08!17;UBERON:0005153!3.40e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0002048,2.85e-10,14;UBERON:0000117,2.85e-10,14;UBERON:0000171,2.85e-10,14;UBERON:0000170,2.85e-10,14;UBERON:0005597,2.85e-10,14;UBERON:0000118,2.85e-10,14;UBERON:0006554,1.24e-08,18;UBERON:0001008,5.15e-08,19;UBERON:0005153,6.01e-08,17;UBERON:0005178,6.01e-08,17;UBERON:0005181,6.01e-08,17;UBERON:0002224,6.01e-08,17;UBERON:0000915,6.01e-08,17;UBERON:0008947,6.01e-08,17;UBERON:0003258,6.01e-08,17;UBERON:0002113,8.55e-08,14;UBERON:0003918,8.55e-08,14;UBERON:0011143,8.55e-08,14;UBERON:0005095,8.55e-08,14;UBERON:0007687,8.55e-08,14;UBERON:0009569,5.01e-07,66|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,1.27564935226605,0,0,0,0,0,0,0,0,0,0,1.27006134691926,1.23012957516914,0,0,0.166234645358492,0,0,0,0,0,0,0,0.881277725829041,0.608261587317087,0.917733760808408,0,0,0,0.388859798148567,0.139986421625363,1.43752564364972,0,0,0,0.257259436035947,0,0.515672092277442,0,0,0.633831403506179,1.0165335962074,0,0,0,0,0,0.384218305321555,0.207379224616955,0.270011876663381,0.630974884054146,0,0,0,0,0,0,0,0.153606533256243,0.131886287730194,0.274462930807229,0,0.279182999001381,0.56276261003168,0.45839474333043,0.294628585473668,0.142371680799103,0.186399445825301,1.81742863999642,0.906858721281426,3.47837386442013,0,0,0,0,0,0.140444420131752,0.511290967734173,0.519572009205738,0.35333957451034,1.26759077799012,0,5.09610479413291,0,0.865964164044856,0.506719730950197,0.505524445014783,1.37020655662872,0,1.48442139064825,0.520455980298408,1.21786191324856,0.461230994512117,1.20578112442098,1.05829836422134,0.628332956648377,0.988779870937496,0.578397427679647,0.884610551949874,0.323533699894818,0,0,0,0,0.209446706813455,0,0,0,0,0.149790639404823,0.915001205637253,0.125654352112864,0,0.255715457330331,0,0,0.81471491080253,0.373220911830279,0,0.210441855886474,0.780722657776222,0.459804208866946,0.540186389416048,0.30140963567143,0.408218994907967,0.12811372028485,0.0937017245597288,0.776110112217047,2.58681591519411,1.70195472151037,1.58356011747554,0.43839146485515,1.66828349535359,2.43776516565517,0.823128545631774,1.59227413454795,0,0,0,1.86413195281952,1.40715635988658,1.08037236876609,0.23674473558521,0.983821158737019,0.771335564436891,0.697601834251224,1.3413670069981,0.700592054203017,0.987359099480883,0,0.324275238183423,1.16959989940266,0.219550115291051,0.134206418760372,0,0.411618449517138,0,0,1.06644125267617,0.696710015581316,0.77320476793256,0,0,0.380451252225118,0,0.329397909448022,0.251335208800269,0.198956472041151,0.779856348476481,0,0,0.199141273254367,0.569003702859245,1.37098215131675,4.50830942692322,2.03651327845314,3.10323979468201,6.59276706968994,6.0707075639287,6.7900668070617,4.86696056308262,6.66344685177723,0.296452627087149,0.333690211432188,0.196558995113203,0.224862112384854,0,0.241177159752417,0.25462585178142,0.287696137450811,0,0.274561413188081,0,0.372140947668503,0,0.252578877947112,0.179397413521912,0,0.923765950833023,0.947457058852424,1.14075483509418,2.37643120085263,1.17345124144251,3.68513766371995,2.38043640886014,2.14647012643579,3.31033802623001,2.21464689648775,2.55127629851979,0.655453258862952,1.38147985492716,2.16973587872267,0,0,0.491764273019036,0.551873492609465,0.160550589987792,0.234423373184406,0.983609672260053,0,0.631016438832513,0.390438744296638,0.646270193198397,1.19484398976276,3.34198011123591,1.98153571552183,1.21443210502468,0.584511715822624,0.790575555893047,0.321321316421807,0.851640511249612,0.712262414669021,0.488660878060728,0.494910368917606,0,0.485561272309963,0.302323556964751,0.377210159511796,0,0.307435147943927,0.258428293168221,1.09060118843252,1.06949213515416,0,0,1.03135543248187,0.340439605753788,0.900305470156551,0.776152102696527,0.214337035031592,0.709360934569094,0.356737635204141,0.164549020602121,0.304464949114599,3.05073220482823,5.2958017715955,0.220528398054962,0.65954501176592,0.968786560175433,0.72375509913787,0.477489376012546,1.14898629821543,0,0.370850604021019,0,0.619160603889667,0.740778109478847,0,0,0,0.169978429993855,0.139951452323658,0.138199973804424,0,0.790839983952838,0.813277868507395,0.540026704109006,0.418176592028937,0,0.269728692769641,0.578574190077352,0.26175594198403,0.129614973291793,0,0,1.49516546043979,1.48912641411388,1.16670713006429,1.03327858782185,0.675824501963113,1.05621514781179,1.3020438484395,0.629156066554265,0.241584120826006,0,0,1.01362607645082,0.102710957164827,0,0.179026695667481,0.198681354781265,0.120195449519969,0,0,0.0762068066549998,0,0,0,0,0,1.77588762699252,0.62799699626633,0.671538465456314,0.386379188064381,0.187682475451182,0.36630324853453,0,0,0,0,0.572895513439397,0,0.685082519770642,0,0,0,0.453142408984205,0,0.93408612825759,1.19707462020309,1.87806966329548,1.21553358534147,0.628839487883947,0,0.888986911206461,1.23621034343337,0.64183841918363,0.505394423527595,1.01391719956096,0.754505365544305,0.37456602987953,0.640251524048693,0.746661096422973,1.90517476513229,1.15884325944855,0.578727661391115,0.824171801606613,0.588795680537589,0.342869252385415,0.354951612318675,0.476872379894642,0.145346416632329,0.658765662907314,0.507687647350059,0.73171189149109,1.05227884575137,0.543216455383447,1.12228454331548,0.593175090620871,0.985044823755635,0.818462086339379,0.929621047115796,0.578719832943424,0.999242311751784,0.233931608445408,0.429742108096597,0.191288332068843,0.441182838239031,0.927471342481686|short_description=p4@Shroom4}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:208431
|HGNC=
|MCL_coexpression_id=3757
|TSSclassifier=NA
|UniProt=uniprot:Q1W617
|association_with_transcript=-35bp_to_NM_001040459,uc009sky.1_5end
|cluster_id=chrX:5977194..5977227,+
|description=CAGE_peak_4_at_Shroom4_5end
|id=chrX:5977194..5977227,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005157!1.21e-08!27;UBERON:0002048!5.60e-08!14;UBERON:0000117!5.60e-08!14;UBERON:0000171!5.60e-08!14;UBERON:0000170!5.60e-08!14;UBERON:0005597!5.60e-08!14;UBERON:0000118!5.60e-08!14;UBERON:0005178!7.96e-08!17;UBERON:0005181!7.96e-08!17;UBERON:0002224!7.96e-08!17;UBERON:0000915!7.96e-08!17;UBERON:0008947!7.96e-08!17;UBERON:0003258!7.96e-08!17;UBERON:0005153!3.40e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0002048,2.85e-10,14;UBERON:0000117,2.85e-10,14;UBERON:0000171,2.85e-10,14;UBERON:0000170,2.85e-10,14;UBERON:0005597,2.85e-10,14;UBERON:0000118,2.85e-10,14;UBERON:0006554,1.24e-08,18;UBERON:0001008,5.15e-08,19;UBERON:0005153,6.01e-08,17;UBERON:0005178,6.01e-08,17;UBERON:0005181,6.01e-08,17;UBERON:0002224,6.01e-08,17;UBERON:0000915,6.01e-08,17;UBERON:0008947,6.01e-08,17;UBERON:0003258,6.01e-08,17;UBERON:0002113,8.55e-08,14;UBERON:0003918,8.55e-08,14;UBERON:0011143,8.55e-08,14;UBERON:0005095,8.55e-08,14;UBERON:0007687,8.55e-08,14;UBERON:0009569,5.01e-07,66
|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,1.27564935226605,0,0,0,0,0,0,0,0,0,0,1.27006134691926,1.23012957516914,0,0,0.166234645358492,0,0,0,0,0,0,0,0.881277725829041,0.608261587317087,0.917733760808408,0,0,0,0.388859798148567,0.139986421625363,1.43752564364972,0,0,0,0.257259436035947,0,0.515672092277442,0,0,0.633831403506179,1.0165335962074,0,0,0,0,0,0.384218305321555,0.207379224616955,0.270011876663381,0.630974884054146,0,0,0,0,0,0,0,0.153606533256243,0.131886287730194,0.274462930807229,0,0.279182999001381,0.56276261003168,0.45839474333043,0.294628585473668,0.142371680799103,0.186399445825301,1.81742863999642,0.906858721281426,3.47837386442013,0,0,0,0,0,0.140444420131752,0.511290967734173,0.519572009205738,0.35333957451034,1.26759077799012,0,5.09610479413291,0,0.865964164044856,0.506719730950197,0.505524445014783,1.37020655662872,0,1.48442139064825,0.520455980298408,1.21786191324856,0.461230994512117,1.20578112442098,1.05829836422134,0.628332956648377,0.988779870937496,0.578397427679647,0.884610551949874,0.323533699894818,0,0,0,0,0.209446706813455,0,0,0,0,0.149790639404823,0.915001205637253,0.125654352112864,0,0.255715457330331,0,0,0.81471491080253,0.373220911830279,0,0.210441855886474,0.780722657776222,0.459804208866946,0.540186389416048,0.30140963567143,0.408218994907967,0.12811372028485,0.0937017245597288,0.776110112217047,2.58681591519411,1.70195472151037,1.58356011747554,0.43839146485515,1.66828349535359,2.43776516565517,0.823128545631774,1.59227413454795,0,0,0,1.86413195281952,1.40715635988658,1.08037236876609,0.23674473558521,0.983821158737019,0.771335564436891,0.697601834251224,1.3413670069981,0.700592054203017,0.987359099480883,0,0.324275238183423,1.16959989940266,0.219550115291051,0.134206418760372,0,0.411618449517138,0,0,1.06644125267617,0.696710015581316,0.77320476793256,0,0,0.380451252225118,0,0.329397909448022,0.251335208800269,0.198956472041151,0.779856348476481,0,0,0.199141273254367,0.569003702859245,1.37098215131675,4.50830942692322,2.03651327845314,3.10323979468201,6.59276706968994,6.0707075639287,6.7900668070617,4.86696056308262,6.66344685177723,0.296452627087149,0.333690211432188,0.196558995113203,0.224862112384854,0,0.241177159752417,0.25462585178142,0.287696137450811,0,0.274561413188081,0,0.372140947668503,0,0.252578877947112,0.179397413521912,0,0.923765950833023,0.947457058852424,1.14075483509418,2.37643120085263,1.17345124144251,3.68513766371995,2.38043640886014,2.14647012643579,3.31033802623001,2.21464689648775,2.55127629851979,0.655453258862952,1.38147985492716,2.16973587872267,0,0,0.491764273019036,0.551873492609465,0.160550589987792,0.234423373184406,0.983609672260053,0,0.631016438832513,0.390438744296638,0.646270193198397,1.19484398976276,3.34198011123591,1.98153571552183,1.21443210502468,0.584511715822624,0.790575555893047,0.321321316421807,0.851640511249612,0.712262414669021,0.488660878060728,0.494910368917606,0,0.485561272309963,0.302323556964751,0.377210159511796,0,0.307435147943927,0.258428293168221,1.09060118843252,1.06949213515416,0,0,1.03135543248187,0.340439605753788,0.900305470156551,0.776152102696527,0.214337035031592,0.709360934569094,0.356737635204141,0.164549020602121,0.304464949114599,3.05073220482823,5.2958017715955,0.220528398054962,0.65954501176592,0.968786560175433,0.72375509913787,0.477489376012546,1.14898629821543,0,0.370850604021019,0,0.619160603889667,0.740778109478847,0,0,0,0.169978429993855,0.139951452323658,0.138199973804424,0,0.790839983952838,0.813277868507395,0.540026704109006,0.418176592028937,0,0.269728692769641,0.578574190077352,0.26175594198403,0.129614973291793,0,0,1.49516546043979,1.48912641411388,1.16670713006429,1.03327858782185,0.675824501963113,1.05621514781179,1.3020438484395,0.629156066554265,0.241584120826006,0,0,1.01362607645082,0.102710957164827,0,0.179026695667481,0.198681354781265,0.120195449519969,0,0,0.0762068066549998,0,0,0,0,0,1.77588762699252,0.62799699626633,0.671538465456314,0.386379188064381,0.187682475451182,0.36630324853453,0,0,0,0,0.572895513439397,0,0.685082519770642,0,0,0,0.453142408984205,0,0.93408612825759,1.19707462020309,1.87806966329548,1.21553358534147,0.628839487883947,0,0.888986911206461,1.23621034343337,0.64183841918363,0.505394423527595,1.01391719956096,0.754505365544305,0.37456602987953,0.640251524048693,0.746661096422973,1.90517476513229,1.15884325944855,0.578727661391115,0.824171801606613,0.588795680537589,0.342869252385415,0.354951612318675,0.476872379894642,0.145346416632329,0.658765662907314,0.507687647350059,0.73171189149109,1.05227884575137,0.543216455383447,1.12228454331548,0.593175090620871,0.985044823755635,0.818462086339379,0.929621047115796,0.578719832943424,0.999242311751784,0.233931608445408,0.429742108096597,0.191288332068843,0.441182838239031,0.927471342481686
|short_description=p4@Shroom4
}}

Revision as of 09:08, 6 August 2015

Short description:p4@Shroom4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Shroom4_5end
Coexpression cluster:MCL_coexpression_mm9:3757
Association with transcript: -35bp_to_NM_001040459, uc009sky.1_5end
EntrezGene:208431
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p4@Shroom4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.28
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.61
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.92
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D91.82
Mouse Schwann, donor2.CNhs12573.11746-123F90.91
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.48
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.27
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.37
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.48
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F51.21
adrenal gland, neonate N00.CNhs11191.1311-23C11.06
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.99
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.41
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E22.59
forelimb, embryo E12.CNhs10600.359-14H21.70
forelimb, embryo E13.CNhs10589.384-1E21.58
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E71.67
forelimb, embryo E17.CNhs10598.1517-43C42.44
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I61.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.86
heart, embryo E12.CNhs11015.353-12F51.41
heart, embryo E13.CNhs11013.376-3I91.08
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C60.77
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I61.17
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.41
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F81.37
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I22.04
kidney, embryo E18.CNhs11001.1288-20C73.10
kidney, neonate N00.CNhs11214.646-21G76.59
kidney, neonate N10.CNhs11206.758-6D56.07
kidney, neonate N20.CNhs11113.832-19I16.79
kidney, neonate N25.CNhs11122.1353-25F34.87
kidney, neonate N30.CNhs11203.1385-42H16.66
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.92
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F81.14
lung, embryo E15.CNhs11020.432-17C52.38
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A63.69
lung, embryo E18.CNhs10583.1287-20I62.38
lung, neonate N00.CNhs11224.640-42C62.15
lung, neonate N06.CNhs11212.683-20E53.31
lung, neonate N07.CNhs11111.715-19A32.21
lung, neonate N10.CNhs11219.750-23E62.55
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C71.38
lung, neonate N30.CNhs11133.1394-42H22.17
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.98
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C70.78
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I73.05
placenta, adult pregnant day17.CNhs10464.577-18G35.30
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G40.97
skin, neonate N03.CNhs11215.662-22H30.72
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C41.15
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.58
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.50
testis, embryo E15.CNhs11034.443-27C51.49
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I51.03
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B71.06
testis, neonate N07.CNhs11222.726-26I41.30
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.78
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.63
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.67
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.93
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H21.88
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
lung2.85e-1014
respiratory tube2.85e-1014
respiration organ2.85e-1014
pair of lungs2.85e-1014
lung primordium2.85e-1014
lung bud2.85e-1014
urinary system structure1.24e-0818
renal system5.15e-0819
epithelial bud6.01e-0817
thoracic cavity element6.01e-0817
thoracic segment organ6.01e-0817
thoracic cavity6.01e-0817
thoracic segment of trunk6.01e-0817
respiratory primordium6.01e-0817
endoderm of foregut6.01e-0817
kidney8.55e-0814
kidney mesenchyme8.55e-0814
upper urinary tract8.55e-0814
kidney rudiment8.55e-0814
kidney field8.55e-0814
subdivision of trunk5.01e-0766
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