FFCP PHASE1:Hg19::chr15:74422736..74422764,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=57611 | |EntrezGene=entrezgene:57611 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=29286 | |HGNC=HGNC:29286 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=Q6UXK2 | |UniProt=uniprot:Q6UXK2 | ||
|association_with_transcript=0bp_to_ENST00000453268,NM_020851,uc010bjf.2_5end | |association_with_transcript=0bp_to_ENST00000453268,NM_020851,uc010bjf.2_5end | ||
|cluster_id=chr15:74422736..74422764,+ | |||
|coexpression_cluster_id=C10 | |coexpression_cluster_id=C10 | ||
|description=CAGE_peak_3_at_ISLR2_5end | |description=CAGE_peak_3_at_ISLR2_5end | ||
Revision as of 04:08, 25 July 2015
| Short description: | p3@ISLR2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_3_at_ISLR2_5end |
| Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
| Association with transcript: | 0bp_to_ENST00000453268, NM_020851, uc010bjf.2_5end |
| EntrezGene: | 57611 |
| HGNC: | 29286 |
| UniProt: | Q6UXK2 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p3@ISLR2 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neuronal stem cell | 1.85e-27 | 8 |
| Merkel cell | 1.31e-18 | 2 |
| neural cell | 2.88e-15 | 25 |
| neuron | 6.14e-14 | 6 |
| neuroblast | 6.14e-14 | 6 |
| electrically signaling cell | 6.14e-14 | 6 |
| neurectodermal cell | 2.49e-10 | 59 |
| ectodermal cell | 2.74e-08 | 72 |
| keratinocyte | 5.49e-08 | 5 |
| stratified squamous epithelial cell | 8.64e-07 | 6 |
Showing 1 to 10 of 16 entries
| Ontology term | p-value | n |
|---|---|---|
| neocortex | 1.79e-19 | 20 |
| nervous system | 9.73e-19 | 89 |
| regional part of cerebral cortex | 1.01e-17 | 22 |
| cerebral cortex | 1.35e-15 | 25 |
| pallium | 1.35e-15 | 25 |
| central nervous system | 1.35e-15 | 81 |
| ectoderm-derived structure | 5.75e-15 | 171 |
| ectoderm | 5.75e-15 | 171 |
| presumptive ectoderm | 5.75e-15 | 171 |
| regional part of telencephalon | 3.90e-12 | 32 |
Showing 1 to 10 of 30 entries
| Ontology term | p-value | n |
|---|---|---|
| neuroectodermal tumor | 2.66e-08 | 10 |
Showing 1 to 1 of 1 entries
