FFCP PHASE1:Hg19::chr20:42136308..42136358,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=26013 | |EntrezGene=entrezgene:26013 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=15905 | |HGNC=HGNC:15905 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=B0QYN5,B0QYN4,Q9Y468 | |UniProt=uniprot:B0QYN5,uniprot:B0QYN4,uniprot:Q9Y468 | ||
|association_with_transcript=0bp_to_ENST00000418998,ENST00000427442,ENST00000434666,ENST00000439769,NM_032107,uc010zwh.1_5end | |association_with_transcript=0bp_to_ENST00000418998,ENST00000427442,ENST00000434666,ENST00000439769,NM_032107,uc010zwh.1_5end | ||
|cluster_id=chr20:42136308..42136358,+ | |||
|coexpression_cluster_id=C10 | |coexpression_cluster_id=C10 | ||
|description=CAGE_peak_2_at_L3MBTL1_5end | |description=CAGE_peak_2_at_L3MBTL1_5end | ||
Revision as of 14:06, 28 July 2015
| Short description: | p2@L3MBTL1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_L3MBTL1_5end |
| Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
| Association with transcript: | 0bp_to_ENST00000418998, ENST00000427442, ENST00000434666, ENST00000439769, NM_032107, uc010zwh.1_5end |
| EntrezGene: | 26013 |
| HGNC: | 15905 |
| UniProt: | B0QYN5B0QYN4Q9Y468 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@L3MBTL1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| ecto-epithelial cell | 3.50e-07 | 34 |
| general ecto-epithelial cell | 4.74e-07 | 14 |
| kidney tubule cell | 8.77e-07 | 10 |
| nephron tubule epithelial cell | 8.77e-07 | 10 |
Showing 1 to 4 of 4 entries
| Ontology term | p-value | n |
|---|---|---|
| regional part of nervous system | 8.07e-29 | 53 |
| regional part of brain | 8.07e-29 | 53 |
| neural tube | 4.29e-28 | 56 |
| neural rod | 4.29e-28 | 56 |
| future spinal cord | 4.29e-28 | 56 |
| neural keel | 4.29e-28 | 56 |
| central nervous system | 2.48e-27 | 81 |
| brain | 2.77e-26 | 68 |
| future brain | 2.77e-26 | 68 |
| regional part of cerebral cortex | 6.43e-24 | 22 |
Showing 1 to 10 of 47 entries
